FFCP PHASE1:Hg19::chr4:113569516..113569523,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=442895 | |EntrezGene=442895 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=31764 | |HGNC=31764 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=62bp_to_NR_029858_5end | |association_with_transcript=62bp_to_NR_029858_5end | ||
|cluster_id=chr4:113569516..113569523,- | |||
|coexpression_cluster_id=C49 | |coexpression_cluster_id=C49 | ||
|description=CAGE_peak_1_at_MIR302C_5end | |description=CAGE_peak_1_at_MIR302C_5end | ||
|id=chr4:113569516..113569523,- | |id=chr4:113569516..113569523,- | ||
|ontology_enrichment_celltype=CL:0002322!3.12e-62!5;CL:0000039!5.00e-28!7;CL:0000586!5.00e-28!7;CL:0000540!1.61e-19!6;CL:0000031!1.61e-19!6;CL:0000404!1.61e-19!6;CL:0000047!8.39e-15!8;CL:0000148!6.26e-12!10;CL:0000541!6.26e-12!10;CL:0000147!1.12e-08!14;CL:0000133!4.29e-07!59 | |ontology_enrichment_celltype=CL:0002322!3.12e-62!5;CL:0000039!5.00e-28!7;CL:0000586!5.00e-28!7;CL:0000540!1.61e-19!6;CL:0000031!1.61e-19!6;CL:0000404!1.61e-19!6;CL:0000047!8.39e-15!8;CL:0000148!6.26e-12!10;CL:0000541!6.26e-12!10;CL:0000147!1.12e-08!14;CL:0000133!4.29e-07!59 | ||
|ontology_enrichment_celltype_v019=CL:0002322;6.39e-98;5!CL:0002321;6.10e-33;15!CL:0000540;3.07e-30;6!CL:0000404;3.07e-30;6!CL:0000148;1.83e-18;10!CL:0000147;2.16e-13;14!CL:0000710;1.44e-09;20!CL:0000075;3.09e-07;27!CL:0002319;3.09e-07;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,1.29e-97,5;CL:0000540,2.78e-30,6;CL:0000031,2.78e-30,6;CL:0000404,2.78e-30,6;CL:0000047,6.43e-23,8;CL:0000148,1.94e-18,10;CL:0000541,1.94e-18,10;CL:0000147,2.25e-13,14;CL:0000133,1.27e-11,59;CL:0000221,1.46e-09,72;CL:0000710,1.49e-09,20;CL:0002319,3.02e-07,25;CL:0000075,3.16e-07,27 | |||
|ontology_enrichment_development_v019=CL:0000031;3.07e-30;6!CL:0000133;3.20e-07;59 | |||
|ontology_enrichment_disease=DOID:3095!1.08e-26!22;DOID:2994!1.08e-26!22 | |ontology_enrichment_disease=DOID:3095!1.08e-26!22;DOID:2994!1.08e-26!22 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000473!1.41e-24!8;UBERON:0003135!5.59e-18!11;UBERON:0000991!1.30e-14!21;UBERON:0009196!1.30e-14!21;UBERON:0009117!1.30e-14!21;UBERON:0005564!1.30e-14!21;UBERON:0004176!5.98e-14!22;UBERON:0003101!3.95e-09!22;UBERON:0000079!3.95e-09!22 | |ontology_enrichment_uberon=UBERON:0000473!1.41e-24!8;UBERON:0003135!5.59e-18!11;UBERON:0000991!1.30e-14!21;UBERON:0009196!1.30e-14!21;UBERON:0009117!1.30e-14!21;UBERON:0005564!1.30e-14!21;UBERON:0004176!5.98e-14!22;UBERON:0003101!3.95e-09!22;UBERON:0000079!3.95e-09!22 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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|short_description=p1@MIR302C | |short_description=p1@MIR302C | ||
}} | }} |
Latest revision as of 18:05, 24 September 2015
Short description: | p1@MIR302C |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_MIR302C_5end |
Coexpression cluster: | C49_H9_iPS_testicular_HES3GFP_teratocarcinoma_hepatoblastoma_choriocarcinoma |
Association with transcript: | 62bp_to_NR_029858_5end |
EntrezGene: | MIR302C |
HGNC: | 31764 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 1.29e-97 | 5 |
neuron | 2.78e-30 | 6 |
neuroblast | 2.78e-30 | 6 |
electrically signaling cell | 2.78e-30 | 6 |
neuronal stem cell | 6.43e-23 | 8 |
melanocyte | 1.94e-18 | 10 |
melanoblast | 1.94e-18 | 10 |
pigment cell | 2.25e-13 | 14 |
neurectodermal cell | 1.27e-11 | 59 |
ectodermal cell | 1.46e-09 | 72 |
neurecto-epithelial cell | 1.49e-09 | 20 |
neural cell | 3.02e-07 | 25 |
columnar/cuboidal epithelial cell | 3.16e-07 | 27 |