FFCP PHASE1:Hg19::chr18:7567378..7567397,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5797 | |EntrezGene=5797 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9675 | |HGNC=9675 | ||
|TSSclassifier=strong | |||
|UniProt=A7MBN1,P28827 | |UniProt=A7MBN1,P28827 | ||
|association_with_transcript=64bp_to_NM_001105244,NM_002845,uc002knn.3,uc010dkv.2_5end | |association_with_transcript=64bp_to_NM_001105244,NM_002845,uc002knn.3,uc010dkv.2_5end | ||
|cluster_id=chr18:7567378..7567397,+ | |||
|coexpression_cluster_id=C1805 | |coexpression_cluster_id=C1805 | ||
|description=CAGE_peak_3_at_PTPRM_5end | |description=CAGE_peak_3_at_PTPRM_5end | ||
|id=chr18:7567378..7567397,+ | |id=chr18:7567378..7567397,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000468!1.38e-13!659;UBERON:0000467!1.45e-12!625;UBERON:0000480!2.63e-12!626;UBERON:0000475!2.73e-12!365;UBERON:0007023!1.62e-11!115;UBERON:0000119!2.44e-11!312;UBERON:0000483!4.32e-11!309;UBERON:0000477!8.19e-11!286;UBERON:0004111!1.80e-10!241;UBERON:0000062!2.25e-10!511;UBERON:0000025!4.42e-08!194;UBERON:0000481!3.35e-07!347 | |ontology_enrichment_uberon=UBERON:0000468!1.38e-13!659;UBERON:0000467!1.45e-12!625;UBERON:0000480!2.63e-12!626;UBERON:0000475!2.73e-12!365;UBERON:0007023!1.62e-11!115;UBERON:0000119!2.44e-11!312;UBERON:0000483!4.32e-11!309;UBERON:0000477!8.19e-11!286;UBERON:0004111!1.80e-10!241;UBERON:0000062!2.25e-10!511;UBERON:0000025!4.42e-08!194;UBERON:0000481!3.35e-07!347 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,5.01e-11,114;UBERON:0004111,2.36e-07,240;UBERON:0000119,2.87e-07,309;UBERON:0000483,4.72e-07,306 | |||
|phase1_expression=3.08853244759946,3.63970890614671,3.24195129420734,2.00146596706261,3.12872766099101,0.872338524100369,0,1.26343974685366,2.87304191019822,1.47440361900905,3.48900583986214,2.18441372130172,0.527533956456907,0.247532705920093,0.662794751455832,0,2.41077811209591,0,1.46379839637152,1.23121058076788,1.02000345622126,1.56727360739044,2.86235987131057,0.958120975510189,1.63205431473244,0,0,0,0,1.15148819429164,0,0,0.6024118375565,0.369754010166788,0,0,0.293600439334847,0.553995408531877,0,0,0.895661896959697,0.32389366601898,0.77272670290256,0.145398238779565,1.13362783106643,0.242584061187816,0.232429036905685,0.411167888021826,0,0,0,0.47296445977717,0.344745680736619,0.645484683583826,1.35426486594342,0.376484679085209,0.272906150057846,0.224723484445085,0.306083892370903,0.962787081228281,0,0,0.398927315243264,0,0,0,0,0,0.521482918420201,0,0.605399502633369,0.736555271975129,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0.393010762749165,0.205601498999509,0,0,0,0,0,0,0.221533894583621,0,0.128091319725675,0.130059347559878,0,0,0,0,0,0,0,1.91610246800961,0,0,0.318565414324097,0,0,0,0,0,0,0,0.604820229674197,0.267440195783507,0.289648807765598,0,0.670700859703636,1.40648818027883,1.80719576192283,1.50401373190767,2.462390822334,3.1811437882044,4.86634870302636,1.03988298880475,0.886917589850256,0.966182642624386,2.5540919722054,0,0,0,0.348259474598534,0.132957960518865,0,0,0,2.38514888840046,1.72046919021225,2.77712401286075,0.56530794192401,2.51699661725944,2.47606237746061,1.8809546988313,3.87625138753993,4.98072767761394,8.36801531911676,2.81980521976403,1.52054421143703,2.68468263302986,1.83831540172934,1.62028389576352,1.87529429396568,2.46982309888787,1.35133776579987,3.06633274931766,3.79706263827252,2.19842092716489,0,0,0,5.4666914686485,0.886413581652058,4.36950296683622,3.44203944898576,1.41867352879343,0.560677600142307,0,1.72667283892012,1.24484414159907,1.21239604862719,1.47115712802113,3.32986340818849,5.18558332031999,0.234321431833797,1.24864030732128,1.1409436430889,0.747243402759005,0.704606991862589,0.971237666208789,0.842704840213491,0.204154171254893,0.491337269247072,1.23990937410919,2.37600571456411,0.741800787835671,0,0,0.168336113954066,0.375355559615893,1.10825646193673,1.31693286264251,1.22595118319608,3.15499923703853,0.794025282120147,4.30535125653269,1.92201649936711,2.11931901159562,3.60109315301283,2.06105058476878,4.89517026086695,2.60563598864226,5.40084263172052,1.55899208257918,5.3011092591264,2.66944706062668,2.58633690910099,5.32514388774922,1.81353776809752,0.847802961552438,0.773043412653187,2.72746120590835,1.72082757233402,0,0.265059536642971,0.116193942869518,1.14027160516907,0.252320850875628,0,1.56449532329816,4.5026865673502,0,4.17931135228781,0,0.354920400119532,0.168584690078102,0.482022059766964,0.110293972732394,0.435758888184812,0.237270619111097,0.269662616320329,0.784885860501384,0.769494313892781,1.4763109092493,1.40241773803446,0,1.47008711385542,0,0.982827216677626,2.36315962672562,0,2.45976877086227,1.88724591328378,0.439001141634502,1.1240175325762,0.502644862058154,0.185176890317059,1.62904152655162,0,0,1.04337364477569,1.6437217193015,0,0.462985512576611,1.14152491340759,0,0,0.492434012174795,1.8720341211139,0.297262324577456,0.93733833986777,2.51973192298289,0.992425680696705,0.716468181622786,0.581267877027924,1.15014803749563,0,0.088048434013226,1.4512968087854,1.15295962733569,0.37872730027914,3.04789892602411,3.4378958300245,2.34434894420094,5.13217338068116,0.822619941626588,0.901029173531752,5.14487578735041,1.45770409648969,1.30788020649984,1.39342743059805,2.19761916788222,3.57656445851882,0,2.6593811658487,2.08014873822732,1.02882949704857,0,0.799266537048298,1.85871391755592,0.542621605391443,0,0.977208552881205,0,0,1.80863626235752,1.74306691720059,1.09970290300263,0,0,0,3.35474797688216,4.59447743336456,1.42636905040718,1.15825045334063,2.05476322550383,1.07436577943937,0,0.985153801009636,0.215627574859517,0.128343036279748,1.01637849688985,0,0,0.502548796003046,0.637938751653163,0,0,0.414415513436035,0.858840442033979,0.500170521059677,1.35632511849868,2.49565033836969,2.49800584316026,2.83864347061082,1.99140405487612,1.20378439891088,0,2.0694614258501,0,0.921845842708516,2.25897397617015,1.17480694477644,1.37257369524342,0.206768026122887,0,0.106727557803444,0.909382714338778,1.66435439510497,2.41912234663744,2.72918588600655,6.75232682467475,3.08726103876381,3.97231362692673,3.07024349440022,1.93024705372329,2.96836132889982,0.771048469013278,1.24293207719189,0.98552587216571,1.03850885836724,1.39452454151951,2.41718899183244,2.00506470303285,0.736647911487171,1.37777337797528,1.45672934405374,2.75361271414791,0,1.15523005656622,0.784349769176855,1.46139224653261,0.844413031143006,3.4120015221269,1.19065593693561,0.431831832204279,4.62681758070868,0.812839312631559,0,0.764628819135115,0,1.34324852833307,0,0,0.512900250232778,0.984043937099117,1.62689197332152,2.16386124460217,0.183138929636687,0.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| ||
|short_description=p3@PTPRM | |short_description=p3@PTPRM | ||
}} | }} |
Latest revision as of 18:47, 24 September 2015
Short description: | p3@PTPRM |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_PTPRM_5end |
Coexpression cluster: | C1805_heart_diaphragm_adipose_vagina_ductus_thyroid_mature |
Association with transcript: | 64bp_to_NM_001105244, NM_002845, uc002knn.3, uc010dkv.2_5end |
EntrezGene: | PTPRM |
HGNC: | 9675 |
UniProt: | A7MBN1P28827 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 5.01e-11 | 114 |
anatomical conduit | 2.36e-07 | 240 |
cell layer | 2.87e-07 | 309 |
epithelium | 4.72e-07 | 306 |