FFCP PHASE1:Hg19::chr11:2159697..2159702,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3481 | |EntrezGene=3481 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=5466 | |HGNC=5466 | ||
|TSSclassifier=strong | |||
|UniProt=P01344 | |UniProt=P01344 | ||
|association_with_transcript=-66bp_to_AK126688_5end | |association_with_transcript=-66bp_to_AK126688_5end | ||
|cluster_id=chr11:2159697..2159702,- | |||
|coexpression_cluster_id=C172 | |coexpression_cluster_id=C172 | ||
|description=CAGE_peak_58_at_IGF2_5end | |description=CAGE_peak_58_at_IGF2_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000349;3.78e-48;19!CL:0002537;7.04e-19;5!CL:0002577;2.98e-18;3!CL:0002541;4.73e-18;3!CL:0002536;7.66e-12;2 | |ontology_enrichment_celltype_v019=CL:0000349;3.78e-48;19!CL:0002537;7.04e-19;5!CL:0002577;2.98e-18;3!CL:0002541;4.73e-18;3!CL:0002536;7.66e-12;2 | ||
|ontology_enrichment_celltype_v019_2=CL:0000349,4.36e-48,19;CL:0002537,9.93e-19,5;CL:0002577,3.08e-18,3;CL:0002541,3.46e-18,3;CL:0002536,1.33e-11,2 | |||
|ontology_enrichment_development_v019=UBERON:0000358;4.50e-07;1!UBERON:0003124;9.50e-07;1!UBERON:0010115;9.50e-07;1 | |ontology_enrichment_development_v019=UBERON:0000358;4.50e-07;1!UBERON:0003124;9.50e-07;1!UBERON:0010115;9.50e-07;1 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005631!1.83e-19!14;UBERON:0000158!1.83e-19!14;UBERON:0000478!2.82e-13!24;UBERON:0003124!2.12e-12!7;UBERON:0004119!1.02e-11!169;UBERON:0000925!1.02e-11!169;UBERON:0006595!1.02e-11!169;UBERON:0004923!2.27e-09!57;UBERON:0000305!7.07e-09!7;UBERON:0004921!5.71e-08!129;UBERON:0004185!5.71e-08!129;UBERON:0007023!7.78e-08!115;UBERON:0001987!9.54e-08!4;UBERON:0004340!9.54e-08!4;UBERON:0004871!1.29e-07!8;UBERON:0001007!3.04e-07!155;UBERON:0001555!3.04e-07!155;UBERON:0007026!3.04e-07!155;UBERON:0000077!3.67e-07!130;UBERON:0005911!4.38e-07!82;UBERON:0000162!5.92e-07!14;UBERON:0001353!5.92e-07!14;UBERON:0000163!5.92e-07!14;UBERON:0006866!5.92e-07!14;UBERON:0000164!5.92e-07!14;UBERON:0000931!5.92e-07!14;UBERON:0001046!6.94e-07!19;UBERON:0001008!8.36e-07!45 | |ontology_enrichment_uberon=UBERON:0005631!1.83e-19!14;UBERON:0000158!1.83e-19!14;UBERON:0000478!2.82e-13!24;UBERON:0003124!2.12e-12!7;UBERON:0004119!1.02e-11!169;UBERON:0000925!1.02e-11!169;UBERON:0006595!1.02e-11!169;UBERON:0004923!2.27e-09!57;UBERON:0000305!7.07e-09!7;UBERON:0004921!5.71e-08!129;UBERON:0004185!5.71e-08!129;UBERON:0007023!7.78e-08!115;UBERON:0001987!9.54e-08!4;UBERON:0004340!9.54e-08!4;UBERON:0004871!1.29e-07!8;UBERON:0001007!3.04e-07!155;UBERON:0001555!3.04e-07!155;UBERON:0007026!3.04e-07!155;UBERON:0000077!3.67e-07!130;UBERON:0005911!4.38e-07!82;UBERON:0000162!5.92e-07!14;UBERON:0001353!5.92e-07!14;UBERON:0000163!5.92e-07!14;UBERON:0006866!5.92e-07!14;UBERON:0000164!5.92e-07!14;UBERON:0000931!5.92e-07!14;UBERON:0001046!6.94e-07!19;UBERON:0001008!8.36e-07!45 | ||
|ontology_enrichment_uberon_v019=UBERON:0000478;3.82e-50;24!UBERON:0005631;8.97e-45;10!UBERON:0000158;8.97e-45;10!UBERON:0000305;9.73e-29;7!UBERON:0001987;2.82e-23;4!UBERON:0003124;4.73e-18;3!UBERON:0000920;4.73e-18;3!UBERON:0000077;4.25e-07;27!UBERON:0002363;9.50e-07;1!UBERON:0007029;9.50e-07;1!UBERON:0000996;9.50e-07;1!UBERON:0001301;9.50e-07;1 | |ontology_enrichment_uberon_v019=UBERON:0000478;3.82e-50;24!UBERON:0005631;8.97e-45;10!UBERON:0000158;8.97e-45;10!UBERON:0000305;9.73e-29;7!UBERON:0001987;2.82e-23;4!UBERON:0003124;4.73e-18;3!UBERON:0000920;4.73e-18;3!UBERON:0000077;4.25e-07;27!UBERON:0002363;9.50e-07;1!UBERON:0007029;9.50e-07;1!UBERON:0000996;9.50e-07;1!UBERON:0001301;9.50e-07;1 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,5.39e-66,14;UBERON:0000158,5.39e-66,14;UBERON:0000478,4.36e-50,24;UBERON:0003124,1.16e-39,7;UBERON:0000305,2.27e-28,7;UBERON:0004871,9.13e-25,8;UBERON:0001987,2.92e-23,4;UBERON:0004340,2.92e-23,4;UBERON:0000920,3.46e-18,3;UBERON:0004923,7.27e-14,66;UBERON:0001008,6.63e-10,48;UBERON:0006554,3.18e-08,47;UBERON:0004175,1.25e-07,25;UBERON:0001301,6.02e-07,1;UBERON:0007029,7.57e-07,1;UBERON:0002363,8.02e-07,1;UBERON:0007645,8.02e-07,1;UBERON:0007647,8.02e-07,1;UBERON:0010115,8.02e-07,1;UBERON:0000996,8.98e-07,1 | |||
|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0.245733936501509,0,1.09220686065086,1.31883489114227,0.123766352960047,0,0,0,0,0,0,0.204000691244253,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0,0.087834785693126,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.311211035399766,0,0,0.302714855289863,0.576175924479999,0,0,0,0,0,0,0,0,0,0,0,0.247266929278557,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232387885739037,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10689594688802,0,0,0,0,0.185176890317059,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.43596006883328,0,0,0,0,0,1.04007436911366,0,0,0,0.142977993658148,1.62786481617433,0,0,0.355391948742546,0,0,0,0,0,0,0,0,0,0,0,0.410952645100767,0,0,0,0,0,0,0,0,0,0,0,0,0,0.736148950314839,0,0,0,0.178428988797162,0,0,0,0,2.0694614258501,0,0,0,2.34961388955289,0.343143423810856,0,0,0,3.03127571446259,3.32870879020994,3.0239029332968,0,0,0,0,0,0,0,0,0,0,0,0,5.55953468121462,0,0,0.229628896329213,0.182091168006717,0.262248829918848,0,0.0770153371044148,0,0,0.105551628892876,0,0,0,1.54227252690289,0.270946437543853,0.501689773854853,0,0,0,0.219259876645935,0.261435451024901,0,0,0,0.721287081534056,0,0,0,0,0,0.096670718292122,0,0,0,0,0.145016693914229,0.0852266274161009,0.712256285173899,0.165284915360978,0.192190067365106,0.255225424989168,0,0,0,0,0,0,0,0,0,0,0,0.190630193923825,0,0,0,0,0,0,0.235624804691373,0,0,0,0,0,0,0.136499911407986,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0.392996164052485,0,0,0,0,0,0,0.288666338176536,0,0,1.03558180854457,0.43050537267123,0,1.33029046061003,1.1486170010348,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,5.01363417949149,5.93929361665277,3.07160702099232,0,0,0,0,0,0,0.276283915531148,0,0,0,0,0,0,0,0.295930216910801,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.230850775511391,0,0.922255617552241,0,0,4.78501739597879,1.55715908783166,16.5240780565777,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0,0,0.0884575645033392,0,0,0,0,0.067401132980677,0.802577647298789,0,0,0,0,0,0,0,1.45329133145522,0,0,0,0,0,0,0,0,0,0,0,1.57254001417827,0.171986032471617,0,0,0,0.193978032976839,0,1.12990370390266,0,0,0.0633107959558787,0,0,0.213452994739353,0.999048047910651,0,0,4.97625493799697,0,0,0,0,0,0,0,0,0,0,0,0,0.279282401272254,0.458320848023367,0.717873024576814,0.199679000498991,0,0.446342914883745,0.470284307407084,0,0,2.20592910460226,1.56590130924216,0.539228350833479,0.984274815147488,0,0,0.136203406111576,0,0,0,0,0,0,0,0,0.157363764404994,0.105600336519406,0,0,0.714695326373367,0,0,0,0,0,0,0,0,0,0,1.32506888912221,0,0,0,0,0.213574825135389,0.157204305099666,0,0,0,0,0,0,0.2506898940227,0,0,0,0,0,0,0,0.110929051536852,0,0,0,0,0,0.470531639396343,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.521745061811734,0,0,0,0,0,0,0,0.400027764663154,0,0,0,0,0,0,0,0.231522474323834,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.567515953566836,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.3062454773532,0,0,0,0.205116364240755,0.252071696221718,0,0,0,0,0,0,0,0,0,0,0.902523940191087,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.33053555243958,0,0,0,0,0,0,0.706437835654626,0,0,0,0,0,0.643288897589907,0,0,0.521574816907738,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243835849964539,0,0.513314034281235,2.3196288626764,1.45713297917742,0,0.198950775161368,0,0,0,0,0.154348316215889,0.437119121007915,0,0.245148321753905,0,0.196308467114945,0,0,0,0.0939839179798536,0.257831551894309,0,0,0,0.0802413666891683,0,0,0,0,0,0,0.5290268405154,0,0,0.432626562123789,0,0,0,0,0,0,0,0.303114792872958,0,0,0,0,1.42838658878244,0.0645889098360061,0.0620747142958579,0,0.0636471582781649,0.202117188958219,0.435433495793923,2.73786640868225,0.134704106029175,0.286888821570705,2.66128285236811,0.488419611665847,0,0,0.538951212639521,2.34640942403454,0,0.813792356631477,1.33151354837103,0,0 | |phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0.245733936501509,0,1.09220686065086,1.31883489114227,0.123766352960047,0,0,0,0,0,0,0.204000691244253,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0,0.087834785693126,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.311211035399766,0,0,0.302714855289863,0.576175924479999,0,0,0,0,0,0,0,0,0,0,0,0.247266929278557,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232387885739037,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10689594688802,0,0,0,0,0.185176890317059,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.43596006883328,0,0,0,0,0,1.04007436911366,0,0,0,0.142977993658148,1.62786481617433,0,0,0.355391948742546,0,0,0,0,0,0,0,0,0,0,0,0.410952645100767,0,0,0,0,0,0,0,0,0,0,0,0,0,0.736148950314839,0,0,0,0.178428988797162,0,0,0,0,2.0694614258501,0,0,0,2.34961388955289,0.343143423810856,0,0,0,3.03127571446259,3.32870879020994,3.0239029332968,0,0,0,0,0,0,0,0,0,0,0,0,5.55953468121462,0,0,0.229628896329213,0.182091168006717,0.262248829918848,0,0.0770153371044148,0,0,0.105551628892876,0,0,0,1.54227252690289,0.270946437543853,0.501689773854853,0,0,0,0.219259876645935,0.261435451024901,0,0,0,0.721287081534056,0,0,0,0,0,0.096670718292122,0,0,0,0,0.145016693914229,0.0852266274161009,0.712256285173899,0.165284915360978,0.192190067365106,0.255225424989168,0,0,0,0,0,0,0,0,0,0,0,0.190630193923825,0,0,0,0,0,0,0.235624804691373,0,0,0,0,0,0,0.136499911407986,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0.392996164052485,0,0,0,0,0,0,0.288666338176536,0,0,1.03558180854457,0.43050537267123,0,1.33029046061003,1.1486170010348,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,5.01363417949149,5.93929361665277,3.07160702099232,0,0,0,0,0,0,0.276283915531148,0,0,0,0,0,0,0,0.295930216910801,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.230850775511391,0,0.922255617552241,0,0,4.78501739597879,1.55715908783166,16.5240780565777,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0,0,0.0884575645033392,0,0,0,0,0.067401132980677,0.802577647298789,0,0,0,0,0,0,0,1.45329133145522,0,0,0,0,0,0,0,0,0,0,0,1.57254001417827,0.171986032471617,0,0,0,0.193978032976839,0,1.12990370390266,0,0,0.0633107959558787,0,0,0.213452994739353,0.999048047910651,0,0,4.97625493799697,0,0,0,0,0,0,0,0,0,0,0,0,0.279282401272254,0.458320848023367,0.717873024576814,0.199679000498991,0,0.446342914883745,0.470284307407084,0,0,2.20592910460226,1.56590130924216,0.539228350833479,0.984274815147488,0,0,0.136203406111576,0,0,0,0,0,0,0,0,0.157363764404994,0.105600336519406,0,0,0.714695326373367,0,0,0,0,0,0,0,0,0,0,1.32506888912221,0,0,0,0,0.213574825135389,0.157204305099666,0,0,0,0,0,0,0.2506898940227,0,0,0,0,0,0,0,0.110929051536852,0,0,0,0,0,0.470531639396343,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.521745061811734,0,0,0,0,0,0,0,0.400027764663154,0,0,0,0,0,0,0,0.231522474323834,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.567515953566836,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.3062454773532,0,0,0,0.205116364240755,0.252071696221718,0,0,0,0,0,0,0,0,0,0,0.902523940191087,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.33053555243958,0,0,0,0,0,0,0.706437835654626,0,0,0,0,0,0.643288897589907,0,0,0.521574816907738,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243835849964539,0,0.513314034281235,2.3196288626764,1.45713297917742,0,0.198950775161368,0,0,0,0,0.154348316215889,0.437119121007915,0,0.245148321753905,0,0.196308467114945,0,0,0,0.0939839179798536,0.257831551894309,0,0,0,0.0802413666891683,0,0,0,0,0,0,0.5290268405154,0,0,0.432626562123789,0,0,0,0,0,0,0,0.303114792872958,0,0,0,0,1.42838658878244,0.0645889098360061,0.0620747142958579,0,0.0636471582781649,0.202117188958219,0.435433495793923,2.73786640868225,0.134704106029175,0.286888821570705,2.66128285236811,0.488419611665847,0,0,0.538951212639521,2.34640942403454,0,0.813792356631477,1.33151354837103,0,0 | ||
|short_description=p58@IGF2 | |short_description=p58@IGF2 | ||
}} | }} |
Latest revision as of 08:18, 17 September 2015
Short description: | p58@IGF2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_58_at_IGF2_5end |
Coexpression cluster: | C172_chorionic_skeletal_tongue_amniotic_liver_gastrointestinal_Pericytes |
Association with transcript: | -66bp_to_AK126688_5end |
EntrezGene: | IGF2 |
HGNC: | 5466 |
UniProt: | P01344 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 4.36e-48 | 19 |
amnion mesenchymal stem cell | 9.93e-19 | 5 |
placental epithelial cell | 3.08e-18 | 3 |
chorionic membrane mesenchymal stem cell | 3.46e-18 | 3 |
amniotic epithelial cell | 1.33e-11 | 2 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 5.39e-66 | 14 |
membranous layer | 5.39e-66 | 14 |
extraembryonic structure | 4.36e-50 | 24 |
chorion | 1.16e-39 | 7 |
amnion | 2.27e-28 | 7 |
somatic layer of lateral plate mesoderm | 9.13e-25 | 8 |
placenta | 2.92e-23 | 4 |
allantois | 2.92e-23 | 4 |
egg chorion | 3.46e-18 | 3 |
organ component layer | 7.27e-14 | 66 |
renal system | 6.63e-10 | 48 |
urinary system structure | 3.18e-08 | 47 |
internal genitalia | 1.25e-07 | 25 |
epididymis | 6.02e-07 | 1 |
surface | 7.57e-07 | 1 |
dura mater | 8.02e-07 | 1 |
future meninx | 8.02e-07 | 1 |
ectomeninx | 8.02e-07 | 1 |
future dura mater | 8.02e-07 | 1 |
vagina | 8.98e-07 | 1 |