FFCP PHASE1:Hg19::chr12:122277601..122277616,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:122277601..122277616,- | |||
|coexpression_cluster_id=C5 | |coexpression_cluster_id=C5 | ||
|description=CAGE_peak_at_chr12:122277601..122277616,- | |description=CAGE_peak_at_chr12:122277601..122277616,- | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000319!2.75e-12!1;CL:0000181!6.00e-09!12;CL:0000417!6.00e-09!12;CL:0000668!6.00e-09!12;CL:0000414!6.00e-09!12;CL:0000412!6.00e-09!12;CL:0000182!6.00e-09!12;CL:0000159!9.02e-07!2 | |ontology_enrichment_celltype=CL:0000319!2.75e-12!1;CL:0000181!6.00e-09!12;CL:0000417!6.00e-09!12;CL:0000668!6.00e-09!12;CL:0000414!6.00e-09!12;CL:0000412!6.00e-09!12;CL:0000182!6.00e-09!12;CL:0000159!9.02e-07!2 | ||
|ontology_enrichment_celltype_v019=CL:0000182;5.22e-12;12 | |ontology_enrichment_celltype_v019=CL:0000182;5.22e-12;12 | ||
|ontology_enrichment_celltype_v019_2=CL:0000182,5.08e-12,12 | |||
|ontology_enrichment_development_v019=UBERON:0004161;4.80e-13;11!UBERON:0009497;3.38e-11;13 | |ontology_enrichment_development_v019=UBERON:0004161;4.80e-13;11!UBERON:0009497;3.38e-11;13 | ||
|ontology_enrichment_disease=DOID:3030!2.75e-12!1 | |ontology_enrichment_disease=DOID:3030!2.75e-12!1 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!1.01e-14!19;UBERON:0006925!1.01e-14!19;UBERON:0008836!1.01e-14!19;UBERON:0008835!1.04e-12!22;UBERON:0003894!1.04e-12!22;UBERON:0000989!1.57e-12!1;UBERON:0008811!1.57e-12!1;UBERON:0006258!1.57e-12!1;UBERON:0005876!1.57e-12!1;UBERON:0004874!1.57e-12!1;UBERON:0002146!3.08e-12!1;UBERON:0005623!3.08e-12!1;UBERON:0009854!3.75e-12!23;UBERON:0007499!3.58e-11!25;UBERON:0009497!3.58e-11!25;UBERON:0000015!3.58e-11!25;UBERON:0002423!3.58e-11!25;UBERON:0006235!3.58e-11!25;UBERON:0004161!3.58e-11!25;UBERON:0005057!9.71e-11!26;UBERON:0009856!9.71e-11!26;UBERON:0002365!5.47e-09!31;UBERON:0002330!5.47e-09!31;UBERON:0002368!6.03e-08!35;UBERON:0005172!6.24e-07!55;UBERON:0005173!6.24e-07!55 | |ontology_enrichment_uberon=UBERON:0002107!1.01e-14!19;UBERON:0006925!1.01e-14!19;UBERON:0008836!1.01e-14!19;UBERON:0008835!1.04e-12!22;UBERON:0003894!1.04e-12!22;UBERON:0000989!1.57e-12!1;UBERON:0008811!1.57e-12!1;UBERON:0006258!1.57e-12!1;UBERON:0005876!1.57e-12!1;UBERON:0004874!1.57e-12!1;UBERON:0002146!3.08e-12!1;UBERON:0005623!3.08e-12!1;UBERON:0009854!3.75e-12!23;UBERON:0007499!3.58e-11!25;UBERON:0009497!3.58e-11!25;UBERON:0000015!3.58e-11!25;UBERON:0002423!3.58e-11!25;UBERON:0006235!3.58e-11!25;UBERON:0004161!3.58e-11!25;UBERON:0005057!9.71e-11!26;UBERON:0009856!9.71e-11!26;UBERON:0002365!5.47e-09!31;UBERON:0002330!5.47e-09!31;UBERON:0002368!6.03e-08!35;UBERON:0005172!6.24e-07!55;UBERON:0005173!6.24e-07!55 | ||
|ontology_enrichment_uberon_v019=UBERON:0002107;2.97e-28;19!UBERON:0006925;2.97e-28;19!UBERON:0002423;1.18e-21;25!UBERON:0002365;2.04e-17;31!UBERON:0002330;2.04e-17;31!UBERON:0002368;1.26e-14;33!UBERON:0000949;1.40e-10;43!UBERON:0005172;3.12e-08;52!UBERON:0005173;3.12e-08;52!UBERON:0002417;4.77e-07;58!UBERON:0000916;4.77e-07;58 | |ontology_enrichment_uberon_v019=UBERON:0002107;2.97e-28;19!UBERON:0006925;2.97e-28;19!UBERON:0002423;1.18e-21;25!UBERON:0002365;2.04e-17;31!UBERON:0002330;2.04e-17;31!UBERON:0002368;1.26e-14;33!UBERON:0000949;1.40e-10;43!UBERON:0005172;3.12e-08;52!UBERON:0005173;3.12e-08;52!UBERON:0002417;4.77e-07;58!UBERON:0000916;4.77e-07;58 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,3.07e-28,19;UBERON:0006925,3.07e-28,19;UBERON:0008836,3.07e-28,19;UBERON:0008835,1.71e-24,22;UBERON:0003894,1.71e-24,22;UBERON:0009854,1.84e-23,23;UBERON:0007499,1.21e-21,25;UBERON:0009497,1.21e-21,25;UBERON:0000015,1.21e-21,25;UBERON:0002423,1.21e-21,25;UBERON:0006235,1.21e-21,25;UBERON:0004161,1.21e-21,25;UBERON:0009856,7.73e-21,26;UBERON:0002365,1.37e-17,31;UBERON:0002330,1.37e-17,31;UBERON:0002368,1.18e-15,35;UBERON:0000949,2.58e-12,45;UBERON:0003929,2.34e-10,54;UBERON:0005172,2.34e-10,54;UBERON:0005173,2.34e-10,54;UBERON:0002530,1.59e-09,59;UBERON:0002417,2.25e-09,60;UBERON:0000916,2.25e-09,60;UBERON:0005911,5.45e-07,82 | |||
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|short_description=p@chr12:122277601..122277616,- | |short_description=p@chr12:122277601..122277616,- | ||
}} | }} |
Latest revision as of 06:01, 24 July 2015
Short description: | p@chr12:122277601..122277616, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:122277601..122277616, - |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 5.08e-12 | 12 |
Ontology term | p-value | n |
---|---|---|
liver | 3.07e-28 | 19 |
digestive gland | 3.07e-28 | 19 |
liver bud | 3.07e-28 | 19 |
hepatic diverticulum | 1.71e-24 | 22 |
liver primordium | 1.71e-24 | 22 |
digestive tract diverticulum | 1.84e-23 | 23 |
epithelial sac | 1.21e-21 | 25 |
epithelium of foregut-midgut junction | 1.21e-21 | 25 |
anatomical boundary | 1.21e-21 | 25 |
hepatobiliary system | 1.21e-21 | 25 |
foregut-midgut junction | 1.21e-21 | 25 |
septum transversum | 1.21e-21 | 25 |
sac | 7.73e-21 | 26 |
exocrine gland | 1.37e-17 | 31 |
exocrine system | 1.37e-17 | 31 |
endocrine gland | 1.18e-15 | 35 |
endocrine system | 2.58e-12 | 45 |
gut epithelium | 2.34e-10 | 54 |
abdomen element | 2.34e-10 | 54 |
abdominal segment element | 2.34e-10 | 54 |
gland | 1.59e-09 | 59 |
abdominal segment of trunk | 2.25e-09 | 60 |
abdomen | 2.25e-09 | 60 |
endo-epithelium | 5.45e-07 | 82 |