FFCP PHASE1:Hg19::chr7:23749767..23749792,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=56164 | |EntrezGene=56164 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11407 | |HGNC=11407 | ||
|TSSclassifier=strong | |||
|UniProt=Q9BXU1 | |UniProt=Q9BXU1 | ||
|association_with_transcript=0bp_to_ENST00000355870_5end | |association_with_transcript=0bp_to_ENST00000355870_5end | ||
|cluster_id=chr7:23749767..23749792,+ | |||
|coexpression_cluster_id=C157 | |coexpression_cluster_id=C157 | ||
|description=CAGE_peak_3_at_STK31_5end | |description=CAGE_peak_3_at_STK31_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0002563!6.07e-13!4;CL:0002322!3.93e-10!5;CL:0000039!1.06e-07!7;CL:0000586!1.06e-07!7;CL:0002253!2.28e-07!2;CL:1000415!2.58e-07!2 | |ontology_enrichment_celltype=CL:0002563!6.07e-13!4;CL:0002322!3.93e-10!5;CL:0000039!1.06e-07!7;CL:0000586!1.06e-07!7;CL:0002253!2.28e-07!2;CL:1000415!2.58e-07!2 | ||
|ontology_enrichment_celltype_v019=CL:0002563;1.11e-25;4!CL:0002253;7.30e-14;2!CL:1000415;1.07e-13;2!CL:0002231;1.41e-09;3 | |ontology_enrichment_celltype_v019=CL:0002563;1.11e-25;4!CL:0002253;7.30e-14;2!CL:1000415;1.07e-13;2!CL:0002231;1.41e-09;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0002563,1.11e-25,4;CL:0002253,7.30e-14,2;CL:1000415,9.40e-14,2;CL:0002231,1.41e-09,3 | |||
|ontology_enrichment_development_v019=UBERON:0009117;4.42e-23;10!UBERON:0005564;4.42e-23;10 | |ontology_enrichment_development_v019=UBERON:0009117;4.42e-23;10!UBERON:0005564;4.42e-23;10 | ||
|ontology_enrichment_disease=DOID:3119!1.19e-13!14 | |ontology_enrichment_disease=DOID:3119!1.19e-13!14 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000473!4.94e-24!8;UBERON:0003135!1.43e-17!11;UBERON:0003101!1.76e-13!22;UBERON:0000079!1.76e-13!22;UBERON:0001242!6.07e-13!4;UBERON:0001262!6.07e-13!4;UBERON:0004786!6.07e-13!4;UBERON:0004808!6.07e-13!4;UBERON:0001277!6.07e-13!4;UBERON:0003350!1.54e-10!5;UBERON:0000991!2.55e-09!21;UBERON:0009196!2.55e-09!21;UBERON:0009117!2.55e-09!21;UBERON:0005564!2.55e-09!21;UBERON:0004176!6.62e-09!22 | |ontology_enrichment_uberon=UBERON:0000473!4.94e-24!8;UBERON:0003135!1.43e-17!11;UBERON:0003101!1.76e-13!22;UBERON:0000079!1.76e-13!22;UBERON:0001242!6.07e-13!4;UBERON:0001262!6.07e-13!4;UBERON:0004786!6.07e-13!4;UBERON:0004808!6.07e-13!4;UBERON:0001277!6.07e-13!4;UBERON:0003350!1.54e-10!5;UBERON:0000991!2.55e-09!21;UBERON:0009196!2.55e-09!21;UBERON:0009117!2.55e-09!21;UBERON:0005564!2.55e-09!21;UBERON:0004176!6.62e-09!22 | ||
|ontology_enrichment_uberon_v019=UBERON:0000473;1.23e-28;8!UBERON:0001242;1.11e-25;4!UBERON:0001262;1.11e-25;4!UBERON:0004786;1.11e-25;4!UBERON:0004808;1.11e-25;4!UBERON:0001277;1.11e-25;4!UBERON:0003135;4.65e-21;11!UBERON:0003101;1.59e-18;22!UBERON:0000079;1.59e-18;22!UBERON:0000485;3.79e-15;7!UBERON:0003929;3.79e-15;7!UBERON:0003350;2.20e-13;8!UBERON:0000991;2.18e-11;21!UBERON:0002110;1.41e-09;3!UBERON:0001052;1.40e-07;4!UBERON:0002323;3.96e-07;45 | |ontology_enrichment_uberon_v019=UBERON:0000473;1.23e-28;8!UBERON:0001242;1.11e-25;4!UBERON:0001262;1.11e-25;4!UBERON:0004786;1.11e-25;4!UBERON:0004808;1.11e-25;4!UBERON:0001277;1.11e-25;4!UBERON:0003135;4.65e-21;11!UBERON:0003101;1.59e-18;22!UBERON:0000079;1.59e-18;22!UBERON:0000485;3.79e-15;7!UBERON:0003929;3.79e-15;7!UBERON:0003350;2.20e-13;8!UBERON:0000991;2.18e-11;21!UBERON:0002110;1.41e-09;3!UBERON:0001052;1.40e-07;4!UBERON:0002323;3.96e-07;45 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,1.36e-28,8;UBERON:0001242,1.11e-25,4;UBERON:0001262,1.11e-25,4;UBERON:0004786,1.11e-25,4;UBERON:0004808,1.11e-25,4;UBERON:0001277,1.11e-25,4;UBERON:0003135,4.98e-21,11;UBERON:0003101,1.66e-18,22;UBERON:0000079,1.66e-18,22;UBERON:0003350,2.20e-13,8;UBERON:0000485,5.22e-12,9;UBERON:0000991,2.26e-11,21;UBERON:0009196,2.26e-11,21;UBERON:0009117,2.26e-11,21;UBERON:0005564,2.26e-11,21;UBERON:0004176,6.93e-11,22;UBERON:0002110,1.30e-09,3;UBERON:0006242,1.30e-09,3;UBERON:0002323,4.23e-09,46;UBERON:0004458,1.45e-08,49;UBERON:0003886,8.31e-08,54;UBERON:0003929,8.93e-08,54;UBERON:0001052,1.40e-07,4;UBERON:0005156,3.62e-07,59;UBERON:0000990,3.62e-07,59;UBERON:0002553,5.97e-07,61 | |||
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|short_description=p3@STK31 | |short_description=p3@STK31 | ||
}} | }} |
Latest revision as of 21:14, 17 September 2015
Short description: | p3@STK31 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_STK31_5end |
Coexpression cluster: | C157_testicular_H9_testis_iPS_teratocarcinoma_colon_trachea |
Association with transcript: | 0bp_to_ENST00000355870_5end |
EntrezGene: | STK31 |
HGNC: | 11407 |
UniProt: | Q9BXU1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 1.11e-25 | 4 |
epithelial cell of large intestine | 7.30e-14 | 2 |
epithelial cell of gall bladder | 9.40e-14 | 2 |
epithelial cell of prostate | 1.41e-09 | 3 |
Ontology term | p-value | n |
---|---|---|
testis | 1.36e-28 | 8 |
intestinal mucosa | 1.11e-25 | 4 |
wall of intestine | 1.11e-25 | 4 |
gastrointestinal system mucosa | 1.11e-25 | 4 |
gastrointestinal system epithelium | 1.11e-25 | 4 |
intestinal epithelium | 1.11e-25 | 4 |
male reproductive organ | 4.98e-21 | 11 |
male organism | 1.66e-18 | 22 |
male reproductive system | 1.66e-18 | 22 |
epithelium of mucosa | 2.20e-13 | 8 |
simple columnar epithelium | 5.22e-12 | 9 |
gonad | 2.26e-11 | 21 |
indifferent external genitalia | 2.26e-11 | 21 |
indifferent gonad | 2.26e-11 | 21 |
gonad primordium | 2.26e-11 | 21 |
external genitalia | 6.93e-11 | 22 |
gallbladder | 1.30e-09 | 3 |
gall bladder primordium | 1.30e-09 | 3 |
body cavity | 4.23e-09 | 46 |
body cavity or lining | 1.45e-08 | 49 |
body cavity precursor | 8.31e-08 | 54 |
gut epithelium | 8.93e-08 | 54 |
rectum | 1.40e-07 | 4 |
reproductive structure | 3.62e-07 | 59 |
reproductive system | 3.62e-07 | 59 |
anatomical cavity | 5.97e-07 | 61 |