FFCP PHASE1:Hg19::chr20:60987744..60987756,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr20:60987744..60987756,- | |||
|coexpression_cluster_id=C794 | |coexpression_cluster_id=C794 | ||
|description=CAGE_peak_at_chr20:60987744..60987756,- | |description=CAGE_peak_at_chr20:60987744..60987756,- | ||
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|ontology_enrichment_celltype=CL:0000181!6.34e-12!12;CL:0000417!6.34e-12!12;CL:0000668!6.34e-12!12;CL:0000414!6.34e-12!12;CL:0000412!6.34e-12!12;CL:0000182!6.34e-12!12 | |ontology_enrichment_celltype=CL:0000181!6.34e-12!12;CL:0000417!6.34e-12!12;CL:0000668!6.34e-12!12;CL:0000414!6.34e-12!12;CL:0000412!6.34e-12!12;CL:0000182!6.34e-12!12 | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:3493!3.43e-09!2 | |ontology_enrichment_disease=DOID:3493!3.43e-09!2 | ||
|ontology_enrichment_disease_v019=DOID:3493;1.15e-15;2 | |ontology_enrichment_disease_v019=DOID:3493;1.15e-15;2 | ||
|ontology_enrichment_disease_v019_2=DOID:3493,1.15e-15,2 | |||
|ontology_enrichment_uberon=UBERON:0000160!3.20e-34!27;UBERON:0005409!1.63e-26!35;UBERON:0000059!1.68e-22!11;UBERON:0001154!2.25e-16!1;UBERON:0001153!2.25e-16!1;UBERON:0001155!7.01e-16!9;UBERON:0004921!3.65e-13!129;UBERON:0004185!3.65e-13!129;UBERON:0004907!3.88e-13!5;UBERON:0001007!8.58e-11!155;UBERON:0001555!8.58e-11!155;UBERON:0007026!8.58e-11!155;UBERON:0009854!8.70e-11!23;UBERON:0002108!6.59e-10!14;UBERON:0004119!8.19e-10!169;UBERON:0000925!8.19e-10!169;UBERON:0006595!8.19e-10!169;UBERON:0009856!1.42e-09!26;UBERON:0002107!9.65e-08!19;UBERON:0006925!9.65e-08!19;UBERON:0008836!9.65e-08!19;UBERON:0008835!9.33e-07!22;UBERON:0003894!9.33e-07!22 | |ontology_enrichment_uberon=UBERON:0000160!3.20e-34!27;UBERON:0005409!1.63e-26!35;UBERON:0000059!1.68e-22!11;UBERON:0001154!2.25e-16!1;UBERON:0001153!2.25e-16!1;UBERON:0001155!7.01e-16!9;UBERON:0004921!3.65e-13!129;UBERON:0004185!3.65e-13!129;UBERON:0004907!3.88e-13!5;UBERON:0001007!8.58e-11!155;UBERON:0001555!8.58e-11!155;UBERON:0007026!8.58e-11!155;UBERON:0009854!8.70e-11!23;UBERON:0002108!6.59e-10!14;UBERON:0004119!8.19e-10!169;UBERON:0000925!8.19e-10!169;UBERON:0006595!8.19e-10!169;UBERON:0009856!1.42e-09!26;UBERON:0002107!9.65e-08!19;UBERON:0006925!9.65e-08!19;UBERON:0008836!9.65e-08!19;UBERON:0008835!9.33e-07!22;UBERON:0003894!9.33e-07!22 | ||
|ontology_enrichment_uberon_v019=UBERON:0000160;2.89e-39;17!UBERON:0005409;7.37e-31;22!UBERON:0000059;1.18e-23;11!UBERON:0002108;1.28e-23;4!UBERON:0004921;2.60e-21;33!UBERON:0001155;1.58e-13;9!UBERON:0001555;7.72e-09;54!UBERON:0001052;2.52e-08;4!UBERON:0004907;6.58e-07;5!UBERON:0001007;9.42e-07;81 | |ontology_enrichment_uberon_v019=UBERON:0000160;2.89e-39;17!UBERON:0005409;7.37e-31;22!UBERON:0000059;1.18e-23;11!UBERON:0002108;1.28e-23;4!UBERON:0004921;2.60e-21;33!UBERON:0001155;1.58e-13;9!UBERON:0001555;7.72e-09;54!UBERON:0001052;2.52e-08;4!UBERON:0004907;6.58e-07;5!UBERON:0001007;9.42e-07;81 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,2.78e-39,17;UBERON:0005409,2.25e-27,25;UBERON:0002108,1.02e-23,4;UBERON:0000059,1.33e-23,11;UBERON:0001155,1.80e-13,9;UBERON:0001052,2.43e-08,4;UBERON:0004907,6.39e-07,5 | |||
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|short_description=p@chr20:60987744..60987756,- | |short_description=p@chr20:60987744..60987756,- | ||
}} | }} |
Latest revision as of 16:09, 28 July 2015
Short description: | p@chr20:60987744..60987756, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr20:60987744..60987756, - |
Coexpression cluster: | C794_small_signet_adenocarcinoma_colon_Hepatocyte_gall_liver |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestine | 2.78e-39 | 17 |
gastrointestinal system | 2.25e-27 | 25 |
small intestine | 1.02e-23 | 4 |
large intestine | 1.33e-23 | 11 |
colon | 1.80e-13 | 9 |
rectum | 2.43e-08 | 4 |
lower digestive tract | 6.39e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
signet ring cell adenocarcinoma | 1.15e-15 | 2 |