FFCP PHASE1:Hg19::chrX:16142302..16142311,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2925 | |EntrezGene=2925 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=4609 | |HGNC=4609 | ||
|TSSclassifier=strong | |||
|UniProt=F5H7W0 | |UniProt=F5H7W0 | ||
|association_with_transcript=257bp_to_ENST00000535371_5end | |association_with_transcript=257bp_to_ENST00000535371_5end | ||
|cluster_id=chrX:16142302..16142311,+ | |||
|description=CAGE_peak_5_at_GRPR_5end | |description=CAGE_peak_5_at_GRPR_5end | ||
|id=chrX:16142302..16142311,+ | |id=chrX:16142302..16142311,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002253;8.10e-26;2!CL:0002563;1.21e-13;4 | |ontology_enrichment_celltype_v019=CL:0002253;8.10e-26;2!CL:0002563;1.21e-13;4 | ||
|ontology_enrichment_celltype_v019_2=CL:0002253,9.18e-26,2;CL:0002563,1.29e-13,4 | |||
|ontology_enrichment_development_v019=UBERON:0009847;1.03e-17;3!UBERON:0003353;1.03e-17;3 | |ontology_enrichment_development_v019=UBERON:0009847;1.03e-17;3!UBERON:0003353;1.03e-17;3 | ||
|ontology_enrichment_disease=DOID:6193!7.03e-08!1;DOID:2355!3.40e-07!1 | |ontology_enrichment_disease=DOID:6193!7.03e-08!1;DOID:2355!3.40e-07!1 | ||
|ontology_enrichment_disease_v019=DOID:6193;2.42e-50;1!DOID:3350;5.56e-26;2 | |ontology_enrichment_disease_v019=DOID:6193;2.42e-50;1!DOID:3350;5.56e-26;2 | ||
|ontology_enrichment_disease_v019_2=DOID:6193,2.42e-50,1;DOID:3350,5.56e-26,2 | |||
|ontology_enrichment_uberon=UBERON:0000956!8.26e-22!25;UBERON:0000203!8.26e-22!25;UBERON:0002619!3.59e-20!22;UBERON:0002791!1.27e-19!33;UBERON:0001893!5.29e-19!34;UBERON:0001950!1.70e-17!20;UBERON:0001869!8.23e-17!32;UBERON:0002020!9.47e-16!34;UBERON:0003528!9.47e-16!34;UBERON:0002780!1.69e-15!41;UBERON:0001890!1.69e-15!41;UBERON:0006240!1.69e-15!41;UBERON:0001049!3.86e-15!57;UBERON:0005068!3.86e-15!57;UBERON:0006241!3.86e-15!57;UBERON:0007135!3.86e-15!57;UBERON:0003080!4.33e-15!42;UBERON:0005743!2.61e-14!86;UBERON:0001876!1.42e-13!2;UBERON:0001017!3.30e-13!82;UBERON:0000073!1.11e-12!94;UBERON:0001016!1.11e-12!94;UBERON:0001871!1.49e-12!7;UBERON:0002616!2.88e-12!59;UBERON:0000349!5.78e-12!5;UBERON:0003056!9.25e-12!61;UBERON:0003075!8.02e-11!86;UBERON:0007284!8.02e-11!86;UBERON:0007023!3.01e-10!115;UBERON:0002346!3.17e-10!90;UBERON:0000955!5.14e-10!69;UBERON:0006238!5.14e-10!69;UBERON:0000200!1.11e-09!6;UBERON:0002702!9.10e-08!1;UBERON:0001301!1.18e-07!1;UBERON:0002336!4.61e-07!1;UBERON:0001018!4.61e-07!1;UBERON:0002473!4.61e-07!1;UBERON:0005340!4.61e-07!1;UBERON:0002316!4.61e-07!1;UBERON:0003544!4.61e-07!1;UBERON:0001020!4.61e-07!1;UBERON:0005970!4.61e-07!1;UBERON:0002437!4.61e-07!1;UBERON:0002581!4.90e-07!1 | |ontology_enrichment_uberon=UBERON:0000956!8.26e-22!25;UBERON:0000203!8.26e-22!25;UBERON:0002619!3.59e-20!22;UBERON:0002791!1.27e-19!33;UBERON:0001893!5.29e-19!34;UBERON:0001950!1.70e-17!20;UBERON:0001869!8.23e-17!32;UBERON:0002020!9.47e-16!34;UBERON:0003528!9.47e-16!34;UBERON:0002780!1.69e-15!41;UBERON:0001890!1.69e-15!41;UBERON:0006240!1.69e-15!41;UBERON:0001049!3.86e-15!57;UBERON:0005068!3.86e-15!57;UBERON:0006241!3.86e-15!57;UBERON:0007135!3.86e-15!57;UBERON:0003080!4.33e-15!42;UBERON:0005743!2.61e-14!86;UBERON:0001876!1.42e-13!2;UBERON:0001017!3.30e-13!82;UBERON:0000073!1.11e-12!94;UBERON:0001016!1.11e-12!94;UBERON:0001871!1.49e-12!7;UBERON:0002616!2.88e-12!59;UBERON:0000349!5.78e-12!5;UBERON:0003056!9.25e-12!61;UBERON:0003075!8.02e-11!86;UBERON:0007284!8.02e-11!86;UBERON:0007023!3.01e-10!115;UBERON:0002346!3.17e-10!90;UBERON:0000955!5.14e-10!69;UBERON:0006238!5.14e-10!69;UBERON:0000200!1.11e-09!6;UBERON:0002702!9.10e-08!1;UBERON:0001301!1.18e-07!1;UBERON:0002336!4.61e-07!1;UBERON:0001018!4.61e-07!1;UBERON:0002473!4.61e-07!1;UBERON:0005340!4.61e-07!1;UBERON:0002316!4.61e-07!1;UBERON:0003544!4.61e-07!1;UBERON:0001020!4.61e-07!1;UBERON:0005970!4.61e-07!1;UBERON:0002437!4.61e-07!1;UBERON:0002581!4.90e-07!1 | ||
|ontology_enrichment_uberon_v019=UBERON:0001052;1.21e-13;4!UBERON:0001242;1.21e-13;4!UBERON:0001262;1.21e-13;4!UBERON:0004786;1.21e-13;4!UBERON:0004808;1.21e-13;4!UBERON:0001277;1.21e-13;4!UBERON:0004907;3.42e-11;5!UBERON:0000485;2.26e-08;7!UBERON:0003929;2.26e-08;7!UBERON:0003350;1.75e-07;8!UBERON:0001155;8.61e-07;9 | |ontology_enrichment_uberon_v019=UBERON:0001052;1.21e-13;4!UBERON:0001242;1.21e-13;4!UBERON:0001262;1.21e-13;4!UBERON:0004786;1.21e-13;4!UBERON:0004808;1.21e-13;4!UBERON:0001277;1.21e-13;4!UBERON:0004907;3.42e-11;5!UBERON:0000485;2.26e-08;7!UBERON:0003929;2.26e-08;7!UBERON:0003350;1.75e-07;8!UBERON:0001155;8.61e-07;9 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001052,1.29e-13,4;UBERON:0001242,1.29e-13,4;UBERON:0001262,1.29e-13,4;UBERON:0004786,1.29e-13,4;UBERON:0004808,1.29e-13,4;UBERON:0001277,1.29e-13,4;UBERON:0001046,1.91e-11,19;UBERON:0004907,3.60e-11,5;UBERON:0003350,1.80e-07,8;UBERON:0001155,8.85e-07,9;UBERON:0000485,8.85e-07,9 | |||
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|short_description=p5@GRPR | |short_description=p5@GRPR | ||
}} | }} |
Latest revision as of 05:43, 20 September 2015
Short description: | p5@GRPR |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_GRPR_5end |
Coexpression cluster: | NA |
Association with transcript: | 257bp_to_ENST00000535371_5end |
EntrezGene: | GRPR |
HGNC: | 4609 |
UniProt: | F5H7W0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of large intestine | 9.18e-26 | 2 |
intestinal epithelial cell | 1.29e-13 | 4 |
Ontology term | p-value | n |
---|---|---|
rectum | 1.29e-13 | 4 |
intestinal mucosa | 1.29e-13 | 4 |
wall of intestine | 1.29e-13 | 4 |
gastrointestinal system mucosa | 1.29e-13 | 4 |
gastrointestinal system epithelium | 1.29e-13 | 4 |
intestinal epithelium | 1.29e-13 | 4 |
hindgut | 1.91e-11 | 19 |
lower digestive tract | 3.60e-11 | 5 |
epithelium of mucosa | 1.80e-07 | 8 |
colon | 8.85e-07 | 9 |
simple columnar epithelium | 8.85e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
epithelioid sarcoma | 2.42e-50 | 1 |
mesenchymal cell neoplasm | 5.56e-26 | 2 |