FFCP PHASE1:Hg19::chr5:149340339..149340358,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1836 | |EntrezGene=1836 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10994 | |HGNC=10994 | ||
|TSSclassifier=strong | |||
|UniProt=C9JAN6 | |UniProt=C9JAN6 | ||
|association_with_transcript=0bp_to_ENST00000433184_5end | |association_with_transcript=0bp_to_ENST00000433184_5end | ||
|cluster_id=chr5:149340339..149340358,+ | |||
|description=CAGE_peak_3_at_SLC26A2_5end | |description=CAGE_peak_3_at_SLC26A2_5end | ||
|id=chr5:149340339..149340358,+ | |id=chr5:149340339..149340358,+ | ||
|ontology_enrichment_celltype=CL:0002057!8.82e-11!42;CL:0000860!2.16e-08!45;CL:0000557!2.40e-07!71;CL:0000839!7.69e-07!70 | |ontology_enrichment_celltype=CL:0002057!8.82e-11!42;CL:0000860!2.16e-08!45;CL:0000557!2.40e-07!71;CL:0000839!7.69e-07!70 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.97e-14;33!CL:0002057;1.97e-14;33!CL:0000473;1.61e-09;39!CL:0000234;1.61e-09;39!CL:0000576;8.27e-07;48 | |ontology_enrichment_celltype_v019=CL:0000860;1.97e-14;33!CL:0002057;1.97e-14;33!CL:0000473;1.61e-09;39!CL:0000234;1.61e-09;39!CL:0000576;8.27e-07;48 | ||
|ontology_enrichment_celltype_v019_2=CL:0000860,7.52e-11,42;CL:0002057,7.52e-11,42;CL:0000557,1.02e-08,67;CL:0000473,1.48e-08,48;CL:0000234,1.48e-08,48;CL:0000839,3.74e-08,66;CL:0002009,7.17e-07,61;CL:0002194,7.69e-07,59;CL:0000576,7.69e-07,59;CL:0000040,7.69e-07,59;CL:0000559,7.69e-07,59 | |||
|ontology_enrichment_development_v019=CL:0002057;9.19e-09;42 | |ontology_enrichment_development_v019=CL:0002057;9.19e-09;42 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000926,1.13e-09,315;UBERON:0004120,1.13e-09,315;UBERON:0006603,1.13e-09,315;UBERON:0003081,2.94e-08,203;UBERON:0002371,9.82e-08,76;UBERON:0001474,2.49e-07,82;UBERON:0002405,3.10e-07,93 | |||
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| ||
|short_description=p3@SLC26A2 | |short_description=p3@SLC26A2 | ||
}} | }} |
Latest revision as of 02:32, 16 September 2015
Short description: | p3@SLC26A2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_SLC26A2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000433184_5end |
EntrezGene: | SLC26A2 |
HGNC: | 10994 |
UniProt: | C9JAN6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 7.52e-11 | 42 |
CD14-positive, CD16-negative classical monocyte | 7.52e-11 | 42 |
granulocyte monocyte progenitor cell | 1.02e-08 | 67 |
defensive cell | 1.48e-08 | 48 |
phagocyte | 1.48e-08 | 48 |
myeloid lineage restricted progenitor cell | 3.74e-08 | 66 |
macrophage dendritic cell progenitor | 7.17e-07 | 61 |
monopoietic cell | 7.69e-07 | 59 |
monocyte | 7.69e-07 | 59 |
monoblast | 7.69e-07 | 59 |
promonocyte | 7.69e-07 | 59 |
Ontology term | p-value | n |
---|---|---|
mesoderm | 1.13e-09 | 315 |
mesoderm-derived structure | 1.13e-09 | 315 |
presumptive mesoderm | 1.13e-09 | 315 |
lateral plate mesoderm | 2.94e-08 | 203 |
bone marrow | 9.82e-08 | 76 |
bone element | 2.49e-07 | 82 |
immune system | 3.10e-07 | 93 |