FFCP PHASE1:Hg19::chr11:1283125..1283153,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr11:1283125..1283153,+ | |||
|coexpression_cluster_id=C444 | |coexpression_cluster_id=C444 | ||
|description=CAGE_peak_at_chr11:1283125..1283153,+ | |description=CAGE_peak_at_chr11:1283125..1283153,+ | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006242;5.97e-34;1!UBERON:0008814;9.86e-18;2!UBERON:0010056;9.86e-18;2!UBERON:0006595;1.40e-07;86 | |ontology_enrichment_development_v019=UBERON:0006242;5.97e-34;1!UBERON:0008814;9.86e-18;2!UBERON:0010056;9.86e-18;2!UBERON:0006595;1.40e-07;86 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003127!1.67e-26!2;UBERON:0000341!5.96e-26!2;UBERON:0002372!5.85e-14!1;UBERON:0001961!5.85e-14!1;UBERON:0001744!5.85e-14!1;UBERON:0001735!5.85e-14!1;UBERON:0001736!8.58e-14!1;UBERON:0006298!8.58e-14!1;UBERON:0000078!2.08e-11!18;UBERON:0000077!3.12e-10!130;UBERON:0004921!3.49e-10!129;UBERON:0004185!3.49e-10!129;UBERON:0001007!5.78e-10!155;UBERON:0001555!5.78e-10!155;UBERON:0007026!5.78e-10!155;UBERON:0000166!8.20e-10!21;UBERON:0007023!1.28e-09!115;UBERON:0001041!2.67e-09!98;UBERON:0001044!3.14e-09!6;UBERON:0003293!3.14e-09!6;UBERON:0003294!3.14e-09!6;UBERON:0010047!3.14e-09!6;UBERON:0000167!3.14e-09!6;UBERON:0004119!5.16e-09!169;UBERON:0000925!5.16e-09!169;UBERON:0006595!5.16e-09!169;UBERON:0000161!7.58e-09!35;UBERON:0003126!2.99e-08!7;UBERON:0001005!2.99e-08!7;UBERON:0002294!4.75e-08!7;UBERON:0001173!4.75e-08!7;UBERON:0004912!4.75e-08!7;UBERON:0001004!5.77e-08!72;UBERON:0001829!1.54e-07!2;UBERON:0000165!2.08e-07!28;UBERON:0000930!2.08e-07!28;UBERON:0000072!8.35e-07!46 | |ontology_enrichment_uberon=UBERON:0003127!1.67e-26!2;UBERON:0000341!5.96e-26!2;UBERON:0002372!5.85e-14!1;UBERON:0001961!5.85e-14!1;UBERON:0001744!5.85e-14!1;UBERON:0001735!5.85e-14!1;UBERON:0001736!8.58e-14!1;UBERON:0006298!8.58e-14!1;UBERON:0000078!2.08e-11!18;UBERON:0000077!3.12e-10!130;UBERON:0004921!3.49e-10!129;UBERON:0004185!3.49e-10!129;UBERON:0001007!5.78e-10!155;UBERON:0001555!5.78e-10!155;UBERON:0007026!5.78e-10!155;UBERON:0000166!8.20e-10!21;UBERON:0007023!1.28e-09!115;UBERON:0001041!2.67e-09!98;UBERON:0001044!3.14e-09!6;UBERON:0003293!3.14e-09!6;UBERON:0003294!3.14e-09!6;UBERON:0010047!3.14e-09!6;UBERON:0000167!3.14e-09!6;UBERON:0004119!5.16e-09!169;UBERON:0000925!5.16e-09!169;UBERON:0006595!5.16e-09!169;UBERON:0000161!7.58e-09!35;UBERON:0003126!2.99e-08!7;UBERON:0001005!2.99e-08!7;UBERON:0002294!4.75e-08!7;UBERON:0001173!4.75e-08!7;UBERON:0004912!4.75e-08!7;UBERON:0001004!5.77e-08!72;UBERON:0001829!1.54e-07!2;UBERON:0000165!2.08e-07!28;UBERON:0000930!2.08e-07!28;UBERON:0000072!8.35e-07!46 | ||
|ontology_enrichment_uberon_v019=UBERON:0003127;2.40e-66;2!UBERON:0002372;5.97e-34;1!UBERON:0001961;5.97e-34;1!UBERON:0001744;5.97e-34;1!UBERON:0001042;5.97e-34;1!UBERON:0001735;5.97e-34;1!UBERON:0003126;7.47e-20;7!UBERON:0001005;7.47e-20;7!UBERON:0006562;9.86e-18;2!UBERON:0002110;2.74e-12;3!UBERON:0001723;2.74e-12;3!UBERON:0001033;2.74e-12;3!UBERON:0007196;7.92e-10;15!UBERON:0001558;7.92e-10;15 | |ontology_enrichment_uberon_v019=UBERON:0003127;2.40e-66;2!UBERON:0002372;5.97e-34;1!UBERON:0001961;5.97e-34;1!UBERON:0001744;5.97e-34;1!UBERON:0001042;5.97e-34;1!UBERON:0001735;5.97e-34;1!UBERON:0003126;7.47e-20;7!UBERON:0001005;7.47e-20;7!UBERON:0006562;9.86e-18;2!UBERON:0002110;2.74e-12;3!UBERON:0001723;2.74e-12;3!UBERON:0001033;2.74e-12;3!UBERON:0007196;7.92e-10;15!UBERON:0001558;7.92e-10;15 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0003127,1.45e-66,2;UBERON:0002372,9.85e-34,1;UBERON:0001961,9.85e-34,1;UBERON:0001744,9.85e-34,1;UBERON:0001735,9.85e-34,1;UBERON:0003126,6.48e-20,7;UBERON:0001005,6.48e-20,7;UBERON:0001042,3.97e-14,10;UBERON:0009145,3.97e-14,10;UBERON:0006562,6.11e-13,11;UBERON:0001723,2.59e-12,3;UBERON:0001033,2.59e-12,3;UBERON:0010056,2.59e-12,3;UBERON:0002110,2.89e-12,3;UBERON:0006242,2.89e-12,3;UBERON:0000072,8.39e-12,47;UBERON:0000065,2.40e-10,54;UBERON:0007196,7.41e-10,15;UBERON:0001558,7.41e-10,15;UBERON:0001557,6.59e-08,19;UBERON:0001004,1.09e-07,74;UBERON:0000166,5.91e-07,22 | |||
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|short_description=p@chr11:1283125..1283153,+ | |short_description=p@chr11:1283125..1283153,+ | ||
}} | }} |
Latest revision as of 19:51, 23 July 2015
Short description: | p@chr11:1283125..1283153, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:1283125..1283153, + |
Coexpression cluster: | C444_CD14_trachea_tonsil_tongue_throat_salivary_gall |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
open tracheal system trachea | 1.45e-66 | 2 |
tonsil | 9.85e-34 | 1 |
mucosa-associated lymphoid tissue | 9.85e-34 | 1 |
lymphoid tissue | 9.85e-34 | 1 |
tonsillar ring | 9.85e-34 | 1 |
trachea | 6.48e-20 | 7 |
respiratory airway | 6.48e-20 | 7 |
chordate pharynx | 3.97e-14 | 10 |
pharyngeal region of foregut | 3.97e-14 | 10 |
pharynx | 6.11e-13 | 11 |
tongue | 2.59e-12 | 3 |
gustatory system | 2.59e-12 | 3 |
future tongue | 2.59e-12 | 3 |
gallbladder | 2.89e-12 | 3 |
gall bladder primordium | 2.89e-12 | 3 |
segment of respiratory tract | 8.39e-12 | 47 |
respiratory tract | 2.40e-10 | 54 |
tracheobronchial tree | 7.41e-10 | 15 |
lower respiratory tract | 7.41e-10 | 15 |
upper respiratory tract | 6.59e-08 | 19 |
respiratory system | 1.09e-07 | 74 |
oral opening | 5.91e-07 | 22 |