FFCP PHASE1:Hg19::chr1:224716846..224716914,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr1:224716846..224716914,+
|short_description=p4@CNIH3
|description=CAGE_peak_4_at_CNIH3_5end
|association_with_transcript=0bp_to_ENST00000478120,ENST000004983...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=149111 | |EntrezGene=149111 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26802 | |HGNC=26802 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000478120,ENST00000498382_5end | |||
|cluster_id=chr1:224716846..224716914,+ | |||
|coexpression_cluster_id=C479 | |||
|description=CAGE_peak_4_at_CNIH3_5end | |||
|id=chr1:224716846..224716914,+ | |||
|ontology_enrichment_celltype=CL:0000055!3.23e-13!180;CL:0000548!5.84e-10!679;CL:0000004!5.84e-10!679;CL:0000255!5.84e-10!679;CL:0000012!1.13e-09!682;CL:0002321!2.79e-08!248;CL:0000220!3.35e-08!246;CL:0000003!1.33e-07!722;CL:0000144!1.92e-07!625;CL:0000057!3.64e-07!75;CL:0002551!4.06e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0002551;2.15e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000333,9.04e-08,41;CL:0002551,1.58e-07,6 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2394!2.68e-10!14;DOID:120!6.38e-08!27;DOID:193!5.14e-07!29 | |||
|ontology_enrichment_disease_v019=DOID:2394;7.89e-15;14!DOID:120;1.57e-10;27!DOID:193;1.24e-09;29 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,9.65e-15,14;DOID:120,1.77e-10,27;DOID:193,1.39e-09,29 | |||
|ontology_enrichment_uberon=UBERON:0000914!2.92e-09!83;UBERON:0002329!2.92e-09!83;UBERON:0003077!2.92e-09!83;UBERON:0003059!2.92e-09!83;UBERON:0007282!2.92e-09!83;UBERON:0009618!2.92e-09!83;UBERON:0007285!2.92e-09!83;UBERON:0004290!9.81e-08!70;UBERON:0000992!1.15e-07!13;UBERON:0000486!1.17e-07!82 | |||
|ontology_enrichment_uberon_v019=UBERON:0000992;7.00e-10;13!UBERON:0002118;2.41e-09;5!UBERON:0000991;1.76e-07;21!UBERON:0002067;2.51e-07;9!UBERON:0002119;4.10e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000992,7.33e-10,13;UBERON:0002118,2.73e-09,5;UBERON:0000991,1.82e-07,21;UBERON:0009196,1.82e-07,21;UBERON:0009117,1.82e-07,21;UBERON:0005564,1.82e-07,21;UBERON:0002067,1.88e-07,9;UBERON:0004016,1.88e-07,9;UBERON:0010083,1.88e-07,9;UBERON:0002119,3.91e-07,4;UBERON:0004176,4.62e-07,22 | |||
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|short_description=p4@CNIH3 | |||
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Latest revision as of 23:35, 15 September 2015
Short description: | p4@CNIH3 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_CNIH3_5end |
Coexpression cluster: | C479_pleomorphic_mesothelioma_cholangiocellular_melanoma_Saos2_serous_glioblastoma |
Association with transcript: | 0bp_to_ENST00000478120, ENST00000498382_5end |
EntrezGene: | CNIH3 |
HGNC: | 26802 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
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migratory neural crest cell | 9.04e-08 | 41 |
fibroblast of dermis | 1.58e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
female gonad | 7.33e-10 | 13 |
right ovary | 2.73e-09 | 5 |
gonad | 1.82e-07 | 21 |
indifferent external genitalia | 1.82e-07 | 21 |
indifferent gonad | 1.82e-07 | 21 |
gonad primordium | 1.82e-07 | 21 |
dermis | 1.88e-07 | 9 |
dermatome | 1.88e-07 | 9 |
future dermis | 1.88e-07 | 9 |
left ovary | 3.91e-07 | 4 |
external genitalia | 4.62e-07 | 22 |
Ontology term | p-value | n |
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ovarian cancer | 9.65e-15 | 14 |
female reproductive organ cancer | 1.77e-10 | 27 |
reproductive organ cancer | 1.39e-09 | 29 |