FFCP PHASE1:Hg19::chr14:70263949..70263975,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6554 | |EntrezGene=6554 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10905 | |HGNC=10905 | ||
|TSSclassifier=strong | |||
|UniProt=Q14973,B2RA41 | |UniProt=Q14973,B2RA41 | ||
|association_with_transcript=30bp_to_ENST00000216540,NM_003049,uc001xlr.2_5end | |association_with_transcript=30bp_to_ENST00000216540,NM_003049,uc001xlr.2_5end | ||
|cluster_id=chr14:70263949..70263975,- | |||
|coexpression_cluster_id=C5 | |coexpression_cluster_id=C5 | ||
|description=CAGE_peak_1_at_SLC10A1_5end | |description=CAGE_peak_1_at_SLC10A1_5end | ||
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|ontology_enrichment_celltype=CL:0000181!7.54e-20!12;CL:0000417!7.54e-20!12;CL:0000668!7.54e-20!12;CL:0000414!7.54e-20!12;CL:0000412!7.54e-20!12;CL:0000182!7.54e-20!12;CL:0002563!1.33e-10!4;CL:0000223!2.12e-09!59 | |ontology_enrichment_celltype=CL:0000181!7.54e-20!12;CL:0000417!7.54e-20!12;CL:0000668!7.54e-20!12;CL:0000414!7.54e-20!12;CL:0000412!7.54e-20!12;CL:0000182!7.54e-20!12;CL:0002563!1.33e-10!4;CL:0000223!2.12e-09!59 | ||
|ontology_enrichment_celltype_v019=CL:0002563;1.48e-20;4!CL:0000182;1.23e-15;12!CL:0002253;4.30e-11;2 | |ontology_enrichment_celltype_v019=CL:0002563;1.48e-20;4!CL:0000182;1.23e-15;12!CL:0002253;4.30e-11;2 | ||
|ontology_enrichment_celltype_v019_2=CL:0002563,1.56e-20,4;CL:0000182,1.23e-15,12;CL:0002253,4.52e-11,2;CL:0000223,1.14e-08,58 | |||
|ontology_enrichment_development_v019=UBERON:0004161;3.56e-08;11!UBERON:0009497;4.73e-07;13 | |ontology_enrichment_development_v019=UBERON:0004161;3.56e-08;11!UBERON:0009497;4.73e-07;13 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0002107;2.94e-26;19!UBERON:0006925;2.94e-26;19!UBERON:0001242;1.48e-20;4!UBERON:0001262;1.48e-20;4!UBERON:0004786;1.48e-20;4!UBERON:0004808;1.48e-20;4!UBERON:0001277;1.48e-20;4!UBERON:0002423;5.08e-20;25!UBERON:0002365;3.73e-16;31!UBERON:0002330;3.73e-16;31!UBERON:0002368;5.56e-14;33!UBERON:0000485;3.43e-12;7!UBERON:0003929;3.43e-12;7!UBERON:0003350;8.68e-11;8!UBERON:0000949;3.28e-10;43!UBERON:0001007;5.12e-10;81!UBERON:0005172;1.97e-07;52!UBERON:0005173;1.97e-07;52 | |ontology_enrichment_uberon_v019=UBERON:0002107;2.94e-26;19!UBERON:0006925;2.94e-26;19!UBERON:0001242;1.48e-20;4!UBERON:0001262;1.48e-20;4!UBERON:0004786;1.48e-20;4!UBERON:0004808;1.48e-20;4!UBERON:0001277;1.48e-20;4!UBERON:0002423;5.08e-20;25!UBERON:0002365;3.73e-16;31!UBERON:0002330;3.73e-16;31!UBERON:0002368;5.56e-14;33!UBERON:0000485;3.43e-12;7!UBERON:0003929;3.43e-12;7!UBERON:0003350;8.68e-11;8!UBERON:0000949;3.28e-10;43!UBERON:0001007;5.12e-10;81!UBERON:0005172;1.97e-07;52!UBERON:0005173;1.97e-07;52 | ||
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|short_description=p1@SLC10A1 | |short_description=p1@SLC10A1 | ||
}} | }} |
Latest revision as of 19:56, 15 September 2015
Short description: | p1@SLC10A1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SLC10A1_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | 30bp_to_ENST00000216540, NM_003049, uc001xlr.2_5end |
EntrezGene: | SLC10A1 |
HGNC: | 10905 |
UniProt: | Q14973B2RA41 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 1.56e-20 | 4 |
hepatocyte | 1.23e-15 | 12 |
epithelial cell of large intestine | 4.52e-11 | 2 |
endodermal cell | 1.14e-08 | 58 |
Ontology term | p-value | n |
---|---|---|
liver | 2.87e-26 | 19 |
digestive gland | 2.87e-26 | 19 |
liver bud | 2.87e-26 | 19 |
hepatic diverticulum | 1.00e-22 | 22 |
liver primordium | 1.00e-22 | 22 |
digestive tract diverticulum | 9.49e-22 | 23 |
intestinal mucosa | 1.56e-20 | 4 |
wall of intestine | 1.56e-20 | 4 |
gastrointestinal system mucosa | 1.56e-20 | 4 |
gastrointestinal system epithelium | 1.56e-20 | 4 |
intestinal epithelium | 1.56e-20 | 4 |
epithelial sac | 4.98e-20 | 25 |
epithelium of foregut-midgut junction | 4.98e-20 | 25 |
anatomical boundary | 4.98e-20 | 25 |
hepatobiliary system | 4.98e-20 | 25 |
foregut-midgut junction | 4.98e-20 | 25 |
septum transversum | 4.98e-20 | 25 |
sac | 2.87e-19 | 26 |
gut epithelium | 9.45e-18 | 54 |
exocrine gland | 3.40e-16 | 31 |
exocrine system | 3.40e-16 | 31 |
endocrine gland | 2.30e-14 | 35 |
endo-epithelium | 1.27e-11 | 82 |
endocrine system | 3.32e-11 | 45 |
epithelium of mucosa | 8.90e-11 | 8 |
simple columnar epithelium | 1.10e-09 | 9 |
abdomen element | 2.36e-09 | 54 |
abdominal segment element | 2.36e-09 | 54 |
gland | 1.44e-08 | 59 |
abdominal segment of trunk | 2.00e-08 | 60 |
abdomen | 2.00e-08 | 60 |
subdivision of digestive tract | 6.45e-08 | 118 |