FFCP PHASE1:Hg19::chr2:189876978..189876985,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt=Q9H394 | |UniProt=Q9H394 | ||
|association_with_transcript=349bp_to_AF130082_5end | |association_with_transcript=349bp_to_AF130082_5end | ||
|cluster_id=chr2:189876978..189876985,+ | |||
|coexpression_cluster_id=C1785 | |coexpression_cluster_id=C1785 | ||
|description=CAGE_peak_21_at_AF130082_5end | |description=CAGE_peak_21_at_AF130082_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0002504!6.92e-07!3;CL:1000279!6.92e-07!3;CL:1000280!6.92e-07!3 | |ontology_enrichment_celltype=CL:0002504!6.92e-07!3;CL:1000279!6.92e-07!3;CL:1000280!6.92e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000222;3.85e-12;1!CL:0002549;6.24e-07;2!CL:0002598;7.40e-07;2 | |ontology_enrichment_celltype_v019=CL:0000222;3.85e-12;1!CL:0002549;6.24e-07;2!CL:0002598;7.40e-07;2 | ||
|ontology_enrichment_celltype_v019_2=CL:0002549,6.80e-07,2;CL:0002598,7.20e-07,2 | |||
|ontology_enrichment_development_v019=UBERON:0000358;1.32e-12;1 | |ontology_enrichment_development_v019=UBERON:0000358;1.32e-12;1 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3571;3.85e-12;1 | |ontology_enrichment_disease_v019=DOID:3571;3.85e-12;1 | ||
|ontology_enrichment_disease_v019_2=DOID:3571,4.81e-12,1 | |||
|ontology_enrichment_uberon=UBERON:0005284!1.17e-07!5 | |ontology_enrichment_uberon=UBERON:0005284!1.17e-07!5 | ||
|ontology_enrichment_uberon_v019=UBERON:0000922;4.73e-13;49!UBERON:0005795;9.92e-13;1!UBERON:0002426;1.86e-12;1!UBERON:0003831;1.86e-12;1!UBERON:0003898;1.86e-12;1!UBERON:0004830;1.86e-12;1!UBERON:0003830;1.86e-12;1!UBERON:0005175;1.86e-12;1!UBERON:0001774;1.86e-12;1!UBERON:0001103;1.86e-12;1!UBERON:0007029;2.46e-12;1!UBERON:0000341;5.11e-07;2!UBERON:0003127;6.24e-07;2!UBERON:0005629;6.24e-07;2!UBERON:0005358;6.24e-07;2!UBERON:0001886;6.24e-07;2!UBERON:0004086;6.24e-07;2!UBERON:0005282;6.24e-07;2!UBERON:0005281;6.24e-07;2!UBERON:0005090;7.40e-07;2!UBERON:0001630;7.40e-07;2 | |ontology_enrichment_uberon_v019=UBERON:0000922;4.73e-13;49!UBERON:0005795;9.92e-13;1!UBERON:0002426;1.86e-12;1!UBERON:0003831;1.86e-12;1!UBERON:0003898;1.86e-12;1!UBERON:0004830;1.86e-12;1!UBERON:0003830;1.86e-12;1!UBERON:0005175;1.86e-12;1!UBERON:0001774;1.86e-12;1!UBERON:0001103;1.86e-12;1!UBERON:0007029;2.46e-12;1!UBERON:0000341;5.11e-07;2!UBERON:0003127;6.24e-07;2!UBERON:0005629;6.24e-07;2!UBERON:0005358;6.24e-07;2!UBERON:0001886;6.24e-07;2!UBERON:0004086;6.24e-07;2!UBERON:0005282;6.24e-07;2!UBERON:0005281;6.24e-07;2!UBERON:0005090;7.40e-07;2!UBERON:0001630;7.40e-07;2 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002426,1.96e-12,1;UBERON:0003831,1.96e-12,1;UBERON:0003898,1.96e-12,1;UBERON:0004830,1.96e-12,1;UBERON:0003830,1.96e-12,1;UBERON:0005175,1.96e-12,1;UBERON:0001774,1.96e-12,1;UBERON:0001103,1.96e-12,1;UBERON:0010084,1.96e-12,1;UBERON:0007029,2.20e-12,1;UBERON:0000341,5.11e-07,2;UBERON:0003127,6.42e-07,2;UBERON:0005629,6.80e-07,2;UBERON:0005358,6.80e-07,2;UBERON:0001886,6.80e-07,2;UBERON:0004086,6.80e-07,2;UBERON:0005282,6.80e-07,2;UBERON:0005281,6.80e-07,2;UBERON:0005090,7.61e-07,2;UBERON:0001630,7.61e-07,2 | |||
|phase1_expression=0,0.428201047781966,0.140954404095971,0,0,0.872338524100369,2.53299878168311,0,0,0,0,0.436882744260345,0,0,0.331397375727916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.75227465255847,0,0,0,0,0,0,0.486634870302636,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0,0,0,0,0,0,0,0.622422070799533,0,0,0.302714855289863,4.60940739583999,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150238058906597,0,0,0,0,0.300091096084402,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.352226082707465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0.845302752556,0,0,0,0,0,0.142977993658148,0.542621605391443,0,0,0.710783897485092,0,0.602878754119172,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0,1.87173775377726,0.178428988797162,0.315404830067869,0.234282829985426,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153461973288062,0,0,0,0.321707842287215,0,0,0.355123450626254,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15350367472613,0,0.107420244868274,0,0,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0.18532421910392,0.143124886741991,0,0.316379424718726,0.190630193923825,0,3.85145089230528,0,0,0.179872457583315,0.274537029736055,0.117812402345686,0,0,0,0,0,0,0,0.282810863907425,0,0,0,0,0,0,0,0,0,0,0.294747123039363,0.35667105148125,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.47748896947538,0.593929361665277,0.614321404198464,0,0,0,0,0,0,0,0,0,0,0.311039587661807,0,0,0,0.197286811273867,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.230850775511391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.4441205797345,0,0,0,0,3.21031058919516,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0.225980740780532,0,0,0,0,0,0,0,0,0,0,0,0,0,0.407712618220842,0.104602846312333,0,0,0,0,0,0.429765441419957,0,0,0,0,0,0,0,0.201550417460179,1.08089965062721,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170388021785422,0,0,0,0,0,0,0,0,0.157204305099666,0,0,0,0,0,0.544017803369474,0.2506898940227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.233713309847224,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.601030435988874,0.380805212168795,0,0,0,0,0,0,0,0,1.26184898228651,0.192619830407303,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318004350653419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.21842848458546,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1598144313382,2.91426595835484,0,0,0,0,0,0,0,0.437119121007915,0,0,0,0,0,0.8453114551668,0.339854229375634,0,0.0644578879735772,0,0,0,0,0.730336388246517,0,0,0,0,0,1.5870805215462,0,0.462175628631418,0.865253124247578,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,7.14193294391221,0,0.0620747142958579,0,0,4.85081253499726,0,0.342233301085281,0,0,4.65724499164419,0,0,0,0,4.69281884806909,0.122241444182866,6.51033885305182,0,0,0 | |phase1_expression=0,0.428201047781966,0.140954404095971,0,0,0.872338524100369,2.53299878168311,0,0,0,0,0.436882744260345,0,0,0.331397375727916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.75227465255847,0,0,0,0,0,0,0.486634870302636,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0,0,0,0,0,0,0,0.622422070799533,0,0,0.302714855289863,4.60940739583999,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150238058906597,0,0,0,0,0.300091096084402,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.352226082707465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0.845302752556,0,0,0,0,0,0.142977993658148,0.542621605391443,0,0,0.710783897485092,0,0.602878754119172,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0,1.87173775377726,0.178428988797162,0.315404830067869,0.234282829985426,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153461973288062,0,0,0,0.321707842287215,0,0,0.355123450626254,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15350367472613,0,0.107420244868274,0,0,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0.18532421910392,0.143124886741991,0,0.316379424718726,0.190630193923825,0,3.85145089230528,0,0,0.179872457583315,0.274537029736055,0.117812402345686,0,0,0,0,0,0,0,0.282810863907425,0,0,0,0,0,0,0,0,0,0,0.294747123039363,0.35667105148125,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.47748896947538,0.593929361665277,0.614321404198464,0,0,0,0,0,0,0,0,0,0,0.311039587661807,0,0,0,0.197286811273867,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.230850775511391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.4441205797345,0,0,0,0,3.21031058919516,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0.225980740780532,0,0,0,0,0,0,0,0,0,0,0,0,0,0.407712618220842,0.104602846312333,0,0,0,0,0,0.429765441419957,0,0,0,0,0,0,0,0.201550417460179,1.08089965062721,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170388021785422,0,0,0,0,0,0,0,0,0.157204305099666,0,0,0,0,0,0.544017803369474,0.2506898940227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.233713309847224,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.601030435988874,0.380805212168795,0,0,0,0,0,0,0,0,1.26184898228651,0.192619830407303,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318004350653419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.21842848458546,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1598144313382,2.91426595835484,0,0,0,0,0,0,0,0.437119121007915,0,0,0,0,0,0.8453114551668,0.339854229375634,0,0.0644578879735772,0,0,0,0,0.730336388246517,0,0,0,0,0,1.5870805215462,0,0.462175628631418,0.865253124247578,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,7.14193294391221,0,0.0620747142958579,0,0,4.85081253499726,0,0.342233301085281,0,0,4.65724499164419,0,0,0,0,4.69281884806909,0.122241444182866,6.51033885305182,0,0,0 | ||
|short_description=p21@AF130082 | |short_description=p21@AF130082 | ||
}} | }} |
Latest revision as of 01:45, 19 September 2015
Short description: | p21@AF130082 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_21_at_AF130082_5end |
Coexpression cluster: | C1785_Cardiac_umbilical_colon_uterus_throat_trachea_Smooth |
Association with transcript: | 349bp_to_AF130082_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast of choroid plexus | 6.80e-07 | 2 |
bronchial smooth muscle cell | 7.20e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
chest muscle | 1.96e-12 | 1 |
respiratory system muscle | 1.96e-12 | 1 |
skeletal muscle of trunk | 1.96e-12 | 1 |
respiratory system skeletal muscle | 1.96e-12 | 1 |
thoracic segment muscle | 1.96e-12 | 1 |
chest organ | 1.96e-12 | 1 |
muscle of trunk | 1.96e-12 | 1 |
diaphragm | 1.96e-12 | 1 |
future diaphragm | 1.96e-12 | 1 |
surface | 2.20e-12 | 1 |
throat | 5.11e-07 | 2 |
open tracheal system trachea | 6.42e-07 | 2 |
vascular plexus | 6.80e-07 | 2 |
ventricle of nervous system | 6.80e-07 | 2 |
choroid plexus | 6.80e-07 | 2 |
brain ventricle | 6.80e-07 | 2 |
ventricular system of brain | 6.80e-07 | 2 |
ventricular system of central nervous system | 6.80e-07 | 2 |
muscle structure | 7.61e-07 | 2 |
muscle organ | 7.61e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
liver cancer | 4.81e-12 | 1 |