FFCP PHASE1:Hg19::chr6:32145082..32145097,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10554 | |EntrezGene=10554 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=324 | |HGNC=324 | ||
|TSSclassifier=strong | |||
|UniProt=Q99943 | |UniProt=Q99943 | ||
|association_with_transcript=4bp_to_ENST00000375104_5end | |association_with_transcript=4bp_to_ENST00000375104_5end | ||
|cluster_id=chr6:32145082..32145097,- | |||
|description=CAGE_peak_9_at_AGPAT1_5end | |description=CAGE_peak_9_at_AGPAT1_5end | ||
|id=chr6:32145082..32145097,- | |id=chr6:32145082..32145097,- | ||
|ontology_enrichment_celltype=CL:0000333!2.89e-12!41;CL:0000133!4.97e-12!59;CL:0002321!1.19e-11!248;CL:0000221!3.43e-11!71;CL:0000220!6.50e-11!246;CL:0000095!4.31e-08!17;CL:0000123!4.31e-08!17;CL:0000055!5.23e-08!180;CL:0002319!5.25e-08!25;CL:0000243!4.96e-07!15;CL:0000125!4.96e-07!15;CL:0000030!4.96e-07!15;CL:0000339!4.96e-07!15 | |ontology_enrichment_celltype=CL:0000333!2.89e-12!41;CL:0000133!4.97e-12!59;CL:0002321!1.19e-11!248;CL:0000221!3.43e-11!71;CL:0000220!6.50e-11!246;CL:0000095!4.31e-08!17;CL:0000123!4.31e-08!17;CL:0000055!5.23e-08!180;CL:0002319!5.25e-08!25;CL:0000243!4.96e-07!15;CL:0000125!4.96e-07!15;CL:0000030!4.96e-07!15;CL:0000339!4.96e-07!15 | ||
|ontology_enrichment_celltype_v019=CL:0000148;1.32e-17;10!CL:0000147;1.22e-14;14!CL:0002322;7.57e-13;5!CL:0002319;1.30e-12;25!CL:0000095;3.09e-11;17!CL:0002077;5.44e-09;34!CL:0002321;5.56e-09;15!CL:0000243;1.33e-08;15!CL:0000125;1.33e-08;15!CL:0000710;8.37e-08;20!CL:0002603;4.49e-07;3 | |ontology_enrichment_celltype_v019=CL:0000148;1.32e-17;10!CL:0000147;1.22e-14;14!CL:0002322;7.57e-13;5!CL:0002319;1.30e-12;25!CL:0000095;3.09e-11;17!CL:0002077;5.44e-09;34!CL:0002321;5.56e-09;15!CL:0000243;1.33e-08;15!CL:0000125;1.33e-08;15!CL:0000710;8.37e-08;20!CL:0002603;4.49e-07;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0000333,1.62e-25,41;CL:0000133,4.14e-21,59;CL:0000221,3.87e-20,72;CL:0000148,1.13e-17,10;CL:0000541,1.13e-17,10;CL:0000147,7.07e-15,14;CL:0002322,6.78e-13,5;CL:0002319,1.33e-12,25;CL:0000095,3.28e-11,17;CL:0000123,3.28e-11,17;CL:0002077,2.10e-09,34;CL:0000243,1.42e-08,15;CL:0000125,1.42e-08,15;CL:0000030,1.42e-08,15;CL:0000339,1.42e-08,15;CL:0000710,7.79e-08,20;CL:0002321,3.09e-07,250 | |||
|ontology_enrichment_development_v019=CL:0000133;1.20e-09;59!CL:0000339;1.33e-08;15!CL:0000221;9.89e-08;72 | |ontology_enrichment_development_v019=CL:0000133;1.20e-09;59!CL:0000339;1.33e-08;15!CL:0000221;9.89e-08;72 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3095;3.91e-14;22!DOID:2994;3.91e-14;22!DOID:171;1.59e-07;10 | |ontology_enrichment_disease_v019=DOID:3095;3.91e-14;22!DOID:2994;3.91e-14;22!DOID:171;1.59e-07;10 | ||
|ontology_enrichment_disease_v019_2=DOID:3095,6.21e-14,22;DOID:2994,6.21e-14,22;DOID:171,1.04e-07,10 | |||
|ontology_enrichment_uberon=UBERON:0000924!1.03e-07!173;UBERON:0006601!1.03e-07!173;UBERON:0000475!7.12e-07!365 | |ontology_enrichment_uberon=UBERON:0000924!1.03e-07!173;UBERON:0006601!1.03e-07!173;UBERON:0000475!7.12e-07!365 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0.181678379270557,0.214100523890983,0,0,0,0,0,0.631719873426831,0,0.245733936501509,0,0,0.527533956456907,0.618831764800233,0.662794751455832,0,1.20538905604795,1.46062018077475,0.487932798790507,1.10808952269109,1.02000345622126,2.19418305034661,1.71741592278634,0.821246550437305,0.627713197974014,0.152826811495903,0.328402357799783,0.0787107813136792,0,0,0,0,0.30120591877825,0.739508020333575,0.387336002901508,1.27952309238679,0.587200878669695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205601498999509,0,0.32592226663359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113309342697566,0.383220493601921,0,0,0,0,0,0.150575119077773,0,0,0,0,0,0,0,0,0.670700859703636,0,0,0,0.144846518960824,0.795285947051099,0.486634870302636,0.756278537312543,0.221729397462564,0.527008714158756,0.196468613246569,1.09288586487763,1.11235332835329,0,0,0.132957960518865,0,0,0,0.39752481473341,0,0.347140501607594,0,1.25849830862972,0,0.626984899610432,0.516833518338658,0.71153252537342,0.33472061276467,0.402829317109147,0,0.24406205754817,0.367663080345869,0,0.446498641420399,0.22452937262617,0.337834441449967,0,0.949265659568129,0.183201743930407,0,0,0,0,0.25326102332916,0.264818361626438,1.14734648299525,0,0.560677600142307,0,0.24666754841716,0,0.404132016209064,0.817309515567294,1.36221684880438,0,0.937285727335186,0,0,0,0,0.161872944368132,0.140450806702248,0.61246251376468,0.245668634623536,0.619954687054593,0,0.247266929278557,2.73048408581408,0.718618141816238,0.336672227908132,0.125118519871964,0.277064115484183,0,0.612975591598039,0,0.113432183160021,0.358779271377724,0.427114777637135,0,0.900273288253207,0.309157587715317,0.515281080091258,0.37223371266318,0,0.779496041289589,0.252433774244115,0.0920498986422993,0.161646056818812,0,0.10075209822764,0.339121184620975,0.193260853163297,0.272746120590835,0,4.63500083292463,4.37348235460901,3.95059405756363,4.45742536566093,3.28017106138317,2.91981887260664,4.69348596989448,0,1.38134921352481,0,0.721879481669586,0.118306800039844,0.168584690078102,0,0.110293972732394,0,0,0.134831308160164,0.196221465125346,0,0,1.40241773803446,1.2347220339942,0,0,0,0,0.882926198829301,0.860919069801795,0.343135620597051,0.329250856225877,0,0.201057944823262,0.370353780634118,0.651616610620649,0,0,0.695582429850461,0.70445216541493,0,0,0.761016608938393,0,0,0,0,0,0,0,0,0.179117045405697,0,0,0.492663237895943,0.264145302039678,0,0.144119953416961,0.25248486685276,2.22242630022592,2.67391897890794,2.34434894420094,0,1.95372236136315,2.70308752059526,1.14330573052231,0.560655421726804,0.43596006883328,0.1466765716419,0.258543431515556,3.57656445851882,0.845302752556,0.26593811658487,0,0.514414748524284,1.41849132023278,0.532844358032199,0.285955987316295,2.17048642156577,0.823240336780769,0.325736184293735,0,0,0,0.871533458600294,0.199945982364114,0,0,0,0.718874566474748,0,0,0.144781306667579,0.205476322550383,0,0.112085143993527,0,0,0,0.76228387266739,0,0,0.335032530668698,0,0,0,0,0.858840442033979,0,0.813795071099207,0.415941723061614,0.178428988797162,0.473107245101804,0.35142424497814,0,0,0,1.32845119707087,0.184369168541703,0.347534457872331,3.91602314925481,1.71571711905428,0,0,0,0.303127571446259,0,0,0,0.61384789315225,0.841980283299221,0,0.511707249066704,0.160853921143607,0,0.154209693802656,0.177561725313127,0.0821271560138091,0,0.116210378459959,1.57117284469109,0.40101294060657,0.368323955743585,0.114814448164607,0.364182336013434,0.131124414959424,1.80479845162965,0.231046011313244,0,1.46139224653261,0,0,0.340187410553031,0.215915916102139,0,0.270946437543853,1.50506932156456,0,0,0.671624264166535,0,0,0.256450125116389,1.96808787419823,0.325378394664303,0,0.0915694648183434,0.165018999841176,1.72279661398852,0.650060246036521,0,0.96670718292122,0.308097234229289,0.307007349452259,0.551346289938122,0.644521469209642,0.290033387828457,0.255679882248303,0.356128142586949,0.165284915360978,0.384380134730212,0.127612712494584,0,0,0.94443704049192,0.6970372701606,0.616067160352178,0,0.869932992075073,0.18532421910392,0,0,0.632758849437452,0.190630193923825,0.511795582622668,0.42793898803392,0.318203247925937,0.78494864019923,0.359744915166629,0,0.117812402345686,0,0,0,0,0.731140468893853,0,0.545999645631943,0,1.13008116620243,0.551365343546124,1.99031692572366,0.438450885253763,1.15755106853338,0.655894752046633,0.202910376962704,0,0.563391205064483,0,0.0982490410131212,0,0.354761064070598,0,0.329294892959902,0.75894634753143,0.699869440489966,0.192444225451024,0,0,0,1.72202149068492,0,0,0.229723400206959,0,0,0,0,0,0,0,0,1.06824071127473,0,0,1.30062222588003,0,0.284567373393656,1.11598390910176,0,0,0.211673582723883,0,0.280797178113459,0,0,0,0.169291777801603,0.1605880751037,0,0,0,0,0,0,0.19538809540204,0.556812347790485,0,0,0.33307196799782,0,0.37428108081644,0,0,0.111443384277478,0.284136146806413,0,0,0,0,0.422008249231538,0,0,4.22250816255987,0.19924798825107,0,0.755798243562828,0.715880777515084,0.12308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| ||
|short_description=p9@AGPAT1 | |short_description=p9@AGPAT1 | ||
}} | }} |
Latest revision as of 01:56, 18 September 2015
Short description: | p9@AGPAT1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_AGPAT1_5end |
Coexpression cluster: | NA |
Association with transcript: | 4bp_to_ENST00000375104_5end |
EntrezGene: | AGPAT1 |
HGNC: | 324 |
UniProt: | Q99943 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
migratory neural crest cell | 1.62e-25 | 41 |
neurectodermal cell | 4.14e-21 | 59 |
ectodermal cell | 3.87e-20 | 72 |
melanocyte | 1.13e-17 | 10 |
melanoblast | 1.13e-17 | 10 |
pigment cell | 7.07e-15 | 14 |
embryonic stem cell | 6.78e-13 | 5 |
neural cell | 1.33e-12 | 25 |
neuron associated cell | 3.28e-11 | 17 |
neuron associated cell (sensu Vertebrata) | 3.28e-11 | 17 |
ecto-epithelial cell | 2.10e-09 | 34 |
glial cell (sensu Vertebrata) | 1.42e-08 | 15 |
glial cell | 1.42e-08 | 15 |
glioblast | 1.42e-08 | 15 |
glioblast (sensu Vertebrata) | 1.42e-08 | 15 |
neurecto-epithelial cell | 7.79e-08 | 20 |
embryonic cell | 3.09e-07 | 250 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 6.21e-14 | 22 |
germ cell cancer | 6.21e-14 | 22 |
neuroectodermal tumor | 1.04e-07 | 10 |