FFCP PHASE1:Hg19::chr1:244234297..244234299,+: Difference between revisions
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|id=chr1:244234297..244234299,+
|short_description=p@chr1:244234297..244234299,+
|description=CAGE_peak_at_chr1:244234297..244234299,+
|association_with_transcript=...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr1:244234297..244234299,+ | |||
|coexpression_cluster_id=C2576 | |||
|description=CAGE_peak_at_chr1:244234297..244234299,+ | |||
|id=chr1:244234297..244234299,+ | |||
|ontology_enrichment_celltype=CL:0000197!1.44e-26!6;CL:0000098!1.44e-26!6;CL:0002167!1.44e-26!6;CL:0002588!4.04e-20!2;CL:0000075!1.43e-12!27;CL:0000342!1.10e-10!1;CL:0002565!1.10e-10!1;CL:0000306!1.95e-10!4;CL:0002222!1.95e-10!4;CL:0002224!1.95e-10!4;CL:0000710!4.12e-08!20 | |||
|ontology_enrichment_celltype_v019=CL:0000197;1.63e-75;6!CL:0000098;1.63e-75;6!CL:0002167;1.63e-75;6!CL:0000075;1.62e-26;27!CL:0000710;3.43e-23;20!CL:0002077;1.86e-12;34!CL:0002580;1.04e-10;3!CL:0000306;2.35e-08;4!CL:0002222;2.35e-08;4!CL:0002224;2.35e-08;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000197,1.22e-75,6;CL:0000098,1.22e-75,6;CL:0002167,1.22e-75,6;CL:0000075,1.45e-26,27;CL:0000710,3.15e-23,20;CL:0002077,6.57e-14,34;CL:0002580,1.09e-10,3;CL:0000306,2.26e-08,4;CL:0002222,2.26e-08,4;CL:0002224,2.26e-08,4;CL:0000133,5.83e-08,59 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002506!1.10e-10!1;UBERON:0001769!1.10e-10!1;UBERON:0010077!1.95e-10!4;UBERON:0005389!1.95e-10!4;UBERON:0000484!1.95e-10!4;UBERON:0002546!1.95e-10!4;UBERON:0000965!1.95e-10!4;UBERON:0001803!1.95e-10!4;UBERON:0003073!1.95e-10!4;UBERON:0005426!1.95e-10!4;UBERON:0002066!1.32e-08!5;UBERON:0007625!2.78e-08!11 | |||
|ontology_enrichment_uberon_v019=UBERON:0010077;2.35e-08;4!UBERON:0005389;2.35e-08;4!UBERON:0000484;2.35e-08;4!UBERON:0000965;2.35e-08;4!UBERON:0001803;2.35e-08;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0010077,2.26e-08,4;UBERON:0005389,2.26e-08,4;UBERON:0000484,2.26e-08,4;UBERON:0002546,2.26e-08,4;UBERON:0000965,2.26e-08,4;UBERON:0001803,2.26e-08,4;UBERON:0003073,2.26e-08,4;UBERON:0005426,2.26e-08,4 | |||
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|short_description=p@chr1:244234297..244234299,+ | |||
}} | }} |
Latest revision as of 05:56, 28 July 2015
Short description: | p@chr1:244234297..244234299, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:244234297..244234299, + |
Coexpression cluster: | C2576_Lens_Preadipocyte_Olfactory_Fibroblast_Cardiac_Smooth_Aortic |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
receptor cell | 1.22e-75 | 6 |
sensory epithelial cell | 1.22e-75 | 6 |
olfactory epithelial cell | 1.22e-75 | 6 |
columnar/cuboidal epithelial cell | 1.45e-26 | 27 |
neurecto-epithelial cell | 3.15e-23 | 20 |
ecto-epithelial cell | 6.57e-14 | 34 |
preadipocyte of the breast | 1.09e-10 | 3 |
crystallin accumulating cell | 2.26e-08 | 4 |
vertebrate lens cell | 2.26e-08 | 4 |
lens epithelial cell | 2.26e-08 | 4 |
neurectodermal cell | 5.83e-08 | 59 |
Ontology term | p-value | n |
---|---|---|
cuboidal epithelium | 2.26e-08 | 4 |
transparent eye structure | 2.26e-08 | 4 |
simple cuboidal epithelium | 2.26e-08 | 4 |
cranial placode | 2.26e-08 | 4 |
lens of camera-type eye | 2.26e-08 | 4 |
epithelium of lens | 2.26e-08 | 4 |
lens placode | 2.26e-08 | 4 |
lens vesicle | 2.26e-08 | 4 |