FFCP PHASE1:Hg19::chr20:35309267..35309289,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr20:35309267..35309289,- | |||
|description=CAGE_peak_at_chr20:35309267..35309289,- | |description=CAGE_peak_at_chr20:35309267..35309289,- | ||
|id=chr20:35309267..35309289,- | |id=chr20:35309267..35309289,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002591;9.81e-20;1!CL:0000317;2.48e-10;2!CL:1000448;2.48e-10;2!CL:0002308;2.48e-10;2!CL:0002545;2.48e-10;2!CL:0002140;2.48e-10;2 | |ontology_enrichment_celltype_v019=CL:0002591;9.81e-20;1!CL:0000317;2.48e-10;2!CL:1000448;2.48e-10;2!CL:0002308;2.48e-10;2!CL:0002545;2.48e-10;2!CL:0002140;2.48e-10;2 | ||
|ontology_enrichment_celltype_v019_2=CL:0002591,1.08e-19,1;CL:0002545,2.07e-10,2;CL:0000317,2.27e-10,2;CL:1000448,2.27e-10,2;CL:0002308,2.27e-10,2;CL:0002140,2.27e-10,2 | |||
|ontology_enrichment_development_v019=UBERON:0006215;2.63e-07;3 | |ontology_enrichment_development_v019=UBERON:0006215;2.63e-07;3 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:0060084;2.63e-07;3!DOID:127;2.63e-07;3 | |ontology_enrichment_disease_v019=DOID:0060084;2.63e-07;3!DOID:127;2.63e-07;3 | ||
|ontology_enrichment_disease_v019_2=DOID:0060084,2.19e-07,3;DOID:127,2.19e-07,3 | |||
|ontology_enrichment_uberon=UBERON:0001049!5.43e-11!57;UBERON:0005068!5.43e-11!57;UBERON:0006241!5.43e-11!57;UBERON:0007135!5.43e-11!57;UBERON:0002780!2.82e-10!41;UBERON:0001890!2.82e-10!41;UBERON:0006240!2.82e-10!41;UBERON:0002616!5.95e-10!59;UBERON:0003080!8.08e-10!42;UBERON:0000955!1.34e-09!69;UBERON:0006238!1.34e-09!69;UBERON:0005743!2.27e-09!86;UBERON:0001017!2.88e-09!82;UBERON:0007023!3.38e-09!115;UBERON:0001893!4.43e-09!34;UBERON:0002619!5.11e-09!22;UBERON:0001869!5.87e-09!32;UBERON:0001950!6.80e-09!20;UBERON:0002020!8.52e-09!34;UBERON:0003528!8.52e-09!34;UBERON:0003075!1.24e-08!86;UBERON:0007284!1.24e-08!86;UBERON:0002791!1.72e-08!33;UBERON:0000033!2.45e-08!123;UBERON:0002346!2.58e-08!90;UBERON:0000073!3.63e-08!94;UBERON:0001016!3.63e-08!94;UBERON:0000153!6.15e-08!129;UBERON:0007811!6.15e-08!129;UBERON:0003056!1.92e-07!61;UBERON:0000956!2.61e-07!25;UBERON:0000203!2.61e-07!25 | |ontology_enrichment_uberon=UBERON:0001049!5.43e-11!57;UBERON:0005068!5.43e-11!57;UBERON:0006241!5.43e-11!57;UBERON:0007135!5.43e-11!57;UBERON:0002780!2.82e-10!41;UBERON:0001890!2.82e-10!41;UBERON:0006240!2.82e-10!41;UBERON:0002616!5.95e-10!59;UBERON:0003080!8.08e-10!42;UBERON:0000955!1.34e-09!69;UBERON:0006238!1.34e-09!69;UBERON:0005743!2.27e-09!86;UBERON:0001017!2.88e-09!82;UBERON:0007023!3.38e-09!115;UBERON:0001893!4.43e-09!34;UBERON:0002619!5.11e-09!22;UBERON:0001869!5.87e-09!32;UBERON:0001950!6.80e-09!20;UBERON:0002020!8.52e-09!34;UBERON:0003528!8.52e-09!34;UBERON:0003075!1.24e-08!86;UBERON:0007284!1.24e-08!86;UBERON:0002791!1.72e-08!33;UBERON:0000033!2.45e-08!123;UBERON:0002346!2.58e-08!90;UBERON:0000073!3.63e-08!94;UBERON:0001016!3.63e-08!94;UBERON:0000153!6.15e-08!129;UBERON:0007811!6.15e-08!129;UBERON:0003056!1.92e-07!61;UBERON:0000956!2.61e-07!25;UBERON:0000203!2.61e-07!25 | ||
|ontology_enrichment_uberon_v019=UBERON:0001874;2.71e-19;1!UBERON:0002771;1.50e-10;2!UBERON:0000078;1.50e-10;2!UBERON:0002012;1.50e-10;2!UBERON:0008886;1.50e-10;2!UBERON:0002419;2.48e-10;2!UBERON:0005800;2.48e-10;2!UBERON:0007771;2.48e-10;2!UBERON:0003297;2.48e-10;2!UBERON:0001821;2.48e-10;2!UBERON:0003487;2.48e-10;2!UBERON:0001515;2.48e-10;2!UBERON:0001820;2.48e-10;2!UBERON:0002114;2.63e-07;2!UBERON:0005383;2.63e-07;3!UBERON:0005382;2.63e-07;3 | |ontology_enrichment_uberon_v019=UBERON:0001874;2.71e-19;1!UBERON:0002771;1.50e-10;2!UBERON:0000078;1.50e-10;2!UBERON:0002012;1.50e-10;2!UBERON:0008886;1.50e-10;2!UBERON:0002419;2.48e-10;2!UBERON:0005800;2.48e-10;2!UBERON:0007771;2.48e-10;2!UBERON:0003297;2.48e-10;2!UBERON:0001821;2.48e-10;2!UBERON:0003487;2.48e-10;2!UBERON:0001515;2.48e-10;2!UBERON:0001820;2.48e-10;2!UBERON:0002114;2.63e-07;2!UBERON:0005383;2.63e-07;3!UBERON:0005382;2.63e-07;3 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001874,4.69e-19,1;UBERON:0002771,1.43e-10,2;UBERON:0000078,1.57e-10,2;UBERON:0007497,1.57e-10,2;UBERON:0003643,1.57e-10,2;UBERON:0003504,1.57e-10,2;UBERON:0003469,1.57e-10,2;UBERON:0003496,1.57e-10,2;UBERON:0002012,1.57e-10,2;UBERON:0008886,1.57e-10,2;UBERON:0007303,1.57e-10,2;UBERON:0002061,1.57e-10,2;UBERON:0005432,1.57e-10,2;UBERON:0004363,1.57e-10,2;UBERON:0005800,2.07e-10,2;UBERON:0001515,2.07e-10,2;UBERON:0002419,2.27e-10,2;UBERON:0007771,2.27e-10,2;UBERON:0003297,2.27e-10,2;UBERON:0001821,2.27e-10,2;UBERON:0003487,2.27e-10,2;UBERON:0001820,2.27e-10,2;UBERON:0005089,2.27e-10,2;UBERON:0005088,2.27e-10,2;UBERON:0004145,1.93e-07,3;UBERON:0005383,3.16e-07,3;UBERON:0005382,3.16e-07,3;UBERON:0002114,3.35e-07,2 | |||
|phase1_expression=0,0.428201047781966,0,0,0,0,0,0,0,0,0,0,0.263766978228454,0,0.331397375727916,0,0,0,0.487932798790507,0,0.204000691244253,0.626909442956176,0,0,0,0.152826811495903,0.0821005894499457,0.236132343941038,0,0,0,0,0,0.369754010166788,0.0774672005803016,0,0,0,0.601633342410425,0,0,0.32389366601898,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199463657621632,0,0,0.56738522469114,0,0,0,0,0,0.368277635987565,0,0,0,0,0,0,0,0.285012743741249,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393010762749165,0,0,0.32592226663359,0,0,0.111410456885174,0,0,0,0.128091319725675,0,0.164437904603676,0,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0.150575119077773,0,0,0,0,0,0,0,0,0.670700859703636,0,0,0,0.289693037921647,0,0.486634870302636,0,0.221729397462564,0,0.0654895377488563,0,0,0,0.174129737299267,0.132957960518865,0,0,0,0.198762407366705,0,0,0,0,0,0.208994966536811,0,0,0,0,0,0,0,1.62028389576352,0,0.22452937262617,0.112611480483322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151357427644931,0,0,0,0,0,0.117434498643765,0,0.280901613404497,0,0,0,0,0,0,0,0,0.125118519871964,0,0.438977620880838,0,0.150238058906597,0.113432183160021,0.179389635688862,0,0,0.300091096084402,0.206105058476878,0,0.18611685633159,0,0,0,0.0920498986422993,0,0,0.201504196455281,0,0.193260853163297,0,0,0.121973706129595,0,0,0,0,0.36497735907583,0,0.643240938192885,0,0,0.721879481669586,0.118306800039844,0,0,0.330881918197182,0,0.237270619111097,0.134831308160164,0.392442930250692,0,0,0,0.8231480226628,0,0,0,0,0,0.122988438543114,0.171567810298526,0.109750285408626,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0.468008530278475,0,0,0,0,0.0895585227028483,0,0,0,0.088048434013226,0,0,0,0.126995788584338,0,0,0,0,0.300343057843917,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,1.14861935834114,0,0,0,0,0.112085143993527,0,0.431255149719035,0.128343036279748,0,0,0,0.167516265334349,0,0,0,0,0,0,0,0.623912584592421,0.535286966391485,0.473107245101804,0,0,0,0,0,0.184369168541703,0,0,0,0.206768026122887,0.215714200818617,0,0,0,0.30239029332968,0,0,0.280660094433074,0.128139149255701,0,0,0,0.154209693802656,0,0.0821271560138091,0.519254429183621,0.464841513839837,0.120859449591622,0,0,0,0,0.131124414959424,0,0,0,0,0.105551628892876,0,0.340187410553031,0.431831832204279,0,0,0.501689773854853,0,0,0,0,0,0.256450125116389,0,0,0,0.0915694648183434,0,0,1.30012049207304,0,0,0.308097234229289,0.307007349452259,0,0,0.435050081742686,0.0852266274161009,0,0,0,0,0.2023155617111,0,0,0,0.308033580176089,0,0,0,0,0,0,0,0,0,0,0.78494864019923,0,0,0.235624804691373,0,0,0,0,0.243713489631284,0,0,0.282810863907425,2.26016233240486,0,0,0,0,0,0,0.30982349809975,0.563391205064483,0,0,0,0,0.211107635297664,0,0,0.349934720244983,0,0,0,0,0,0,0,0,0.507447609232169,0,0,0,0,0,0,0.79312517629427,0.213648142254946,0,0,0,0,0.142283686696828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0.121360521749513,0,0,0,0,0,0.994147647766298,0.281338832821026,0,0,0,0.19924798825107,0,0.251932747854276,0.102268682502155,0.123084805461069,0.311039587661807,0,0,0.511572370226872,0.0986434056369336,0,0,1.93866549219044,0.185536196323703,0,0,0,0,0,0,0,0.344743373241465,0,0.173624994933292,0.885741385813839,0.120596438625408,0,1.21637185924347,0,0.219385397153973,0,0,0.153900517007594,0.113942055847001,0,0,0,0.31900115973192,0.0915975934018623,0,0,0,0.166211681900156,0,0,0.167821586975843,0,0,0.843992258112108,0,0,0,0,0,0,0.296521128680622,0,0,0,0,0.702793337176017,0,0,0,0,0,0.30607276163049,0,0,0,0,0.330991955875499,0,0,0,0.277349346026277,0,0,0.0870592065804026,0,0,0.387025325156341,0.292357268344742,0.246346371159628,0,0,0.677942222341597,0,0,0.126621591911757,0,0,0,0.39961921916426,0,0.114536596165916,0.514784993585894,0,0,0,0,0.104602846312333,0.101998217636322,0,0,0.136905378891993,0,0,0,0,0,0,0.599037001496973,0.429226048136571,0,0,0.360299883542404,0,0.393915911536118,0.164831716762333,0.202210631562555,0,0.0846733320657845,0,0.681017030557878,0.160753148465019,0,0.415440338029185,0,0,0.303747783290123,0,0,0,0,0.179287339332845,0.191915197319445,0,0,0,1.62899880526114,0,0.979762080328227,0,0,0,0,0.146552233678082,0,0,0.13223260174269,0,0,0,0,0.414239055347196,0,0,0,0,0,0,0,0,0.157054096250234,0.886068179966986,2.92863035764712,0.500763722825999,0,0.443716206147409,0.18628920882415,0,0,0,0,0.235265819698172,0.468334905806882,0.434763085832475,0.298509605773748,0,0,0.189403005275089,0,0,0,0.453692771289717,0,0.147855149989634,0.159296767163702,0,0,0,0,0,0,0.380805212168795,0,0,0,0.464033759878494,0,0.400027764663154,0,0.336749488765919,0,0,0,0,0,0.463044948647668,0.244736704506468,0.179088841081487,0.308801447160972,0,0,0,0,0.256241518587947,0.345430341731199,0.303859956177382,0.276516872303462,0.194860308839388,0,0,0,0.491545817507439,0,0,0,0,0,0.184105950251841,0,0,0,0.107824811396682,0,0,0,0,0,0,0,0,0,0.352675943690684,0.3062454773532,0,0,0.319267718114302,1.23069818544453,0.252071696221718,0.345786262321089,0.645902582527404,0,0,0.11796972334774,0.73371439408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| ||
|short_description=p@chr20:35309267..35309289,- | |short_description=p@chr20:35309267..35309289,- | ||
}} | }} |
Latest revision as of 13:38, 28 July 2015
Short description: | p@chr20:35309267..35309289, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr20:35309267..35309289, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of the pulmonary artery | 1.08e-19 | 1 |
thoracic aorta endothelial cell | 2.07e-10 | 2 |
sebum secreting cell | 2.27e-10 | 2 |
epithelial cell of sweat gland | 2.27e-10 | 2 |
epithelial cell of skin gland | 2.27e-10 | 2 |
acinar cell of sebaceous gland | 2.27e-10 | 2 |
Ontology term | p-value | n |
---|---|---|
putamen | 4.69e-19 | 1 |
middle temporal gyrus | 1.43e-10 | 2 |
mixed ectoderm/mesoderm/endoderm-derived structure | 1.57e-10 | 2 |
developing epithelial placode | 1.57e-10 | 2 |
respiratory system arterial blood vessel | 1.57e-10 | 2 |
respiratory system blood vessel | 1.57e-10 | 2 |
respiratory system artery | 1.57e-10 | 2 |
head blood vessel | 1.57e-10 | 2 |
pulmonary artery | 1.57e-10 | 2 |
pulmonary vascular system | 1.57e-10 | 2 |
pharyngeal vasculature | 1.57e-10 | 2 |
truncus arteriosus | 1.57e-10 | 2 |
aortic sac | 1.57e-10 | 2 |
pharyngeal arch artery | 1.57e-10 | 2 |
segment of aorta | 2.07e-10 | 2 |
thoracic aorta | 2.07e-10 | 2 |
skin gland | 2.27e-10 | 2 |
epidermis gland | 2.27e-10 | 2 |
gland of integumental system | 2.27e-10 | 2 |
sebaceous gland | 2.27e-10 | 2 |
skin sebaceous gland | 2.27e-10 | 2 |
sweat gland | 2.27e-10 | 2 |
sweat gland placode | 2.27e-10 | 2 |
sebaceous gland placode | 2.27e-10 | 2 |
outflow tract | 1.93e-07 | 3 |
caudate-putamen | 3.16e-07 | 3 |
dorsal striatum | 3.16e-07 | 3 |
duodenum | 3.35e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
cell type benign neoplasm | 2.19e-07 | 3 |
leiomyoma | 2.19e-07 | 3 |