FFCP PHASE1:Hg19::chr14:22974965..22974974,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(4 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr14:22974965..22974974,- | |||
|description=CAGE_peak_at_chr14:22974965..22974974,- | |description=CAGE_peak_at_chr14:22974965..22974974,- | ||
|id=chr14:22974965..22974974,- | |id=chr14:22974965..22974974,- | ||
|ontology_enrichment_celltype=CL:0000838!2.48e-20!52;CL:0000542!7.98e-20!53;CL:0000051!7.98e-20!53;CL:0000791!1.41e-12!18;CL:0000789!1.41e-12!18;CL:0002420!1.41e-12!18;CL:0002419!1.41e-12!18;CL:0000790!1.41e-12!18;CL:0000624!3.50e-11!6;CL:0000084!2.39e-10!25;CL:0000827!2.39e-10!25;CL:0000623!4.13e-09!3;CL:0000825!4.13e-09!3;CL:0002087!1.85e-08!119;CL:0000738!1.16e-07!140;CL:0002032!1.88e-07!165;CL:0000837!1.88e-07!165;CL:0000037!1.89e-07!172;CL:0000566!1.89e-07!172;CL:0000988!3.02e-07!182;CL:0002031!3.70e-07!124;CL:0000945!6.00e-07!24;CL:0000826!6.00e-07!24 | |ontology_enrichment_celltype=CL:0000838!2.48e-20!52;CL:0000542!7.98e-20!53;CL:0000051!7.98e-20!53;CL:0000791!1.41e-12!18;CL:0000789!1.41e-12!18;CL:0002420!1.41e-12!18;CL:0002419!1.41e-12!18;CL:0000790!1.41e-12!18;CL:0000624!3.50e-11!6;CL:0000084!2.39e-10!25;CL:0000827!2.39e-10!25;CL:0000623!4.13e-09!3;CL:0000825!4.13e-09!3;CL:0002087!1.85e-08!119;CL:0000738!1.16e-07!140;CL:0002032!1.88e-07!165;CL:0000837!1.88e-07!165;CL:0000037!1.89e-07!172;CL:0000566!1.89e-07!172;CL:0000988!3.02e-07!182;CL:0002031!3.70e-07!124;CL:0000945!6.00e-07!24;CL:0000826!6.00e-07!24 | ||
|ontology_enrichment_celltype_v019=CL:0000946;6.72e-26;1!CL:0000895;6.72e-26;1!CL:0000786;6.72e-26;1!CL:0000898;1.47e-09;3!CL:0000623;1.47e-09;3 | |ontology_enrichment_celltype_v019=CL:0000946;6.72e-26;1!CL:0000895;6.72e-26;1!CL:0000786;6.72e-26;1!CL:0000898;1.47e-09;3!CL:0000623;1.47e-09;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0000946,5.93e-26,1;CL:0000786,5.93e-26,1;CL:0000980,5.93e-26,1;CL:0000810,7.62e-26,1;CL:0000895,7.62e-26,1;CL:0002436,7.62e-26,1;CL:0002427,7.62e-26,1;CL:0002428,7.62e-26,1;CL:0002429,7.62e-26,1;CL:0002433,7.62e-26,1;CL:0002431,7.62e-26,1;CL:0002432,7.62e-26,1;CL:0000785,1.07e-13,2;CL:0000955,1.07e-13,2;CL:0000818,1.07e-13,2;CL:0000954,1.07e-13,2;CL:0000816,1.07e-13,2;CL:0000893,1.21e-13,2;CL:0002489,1.21e-13,2;CL:0000809,1.21e-13,2;CL:0000808,1.21e-13,2;CL:0000894,1.21e-13,2;CL:0000806,1.21e-13,2;CL:0000807,1.21e-13,2;CL:0000805,1.21e-13,2;CL:0002425,1.21e-13,2;CL:0000817,1.41e-09,3;CL:0000898,1.54e-09,3;CL:0000623,1.67e-09,3;CL:0000825,1.67e-09,3 | |||
|ontology_enrichment_development_v019=CL:0002427;6.72e-26;1!CL:0000954;1.14e-13;2!CL:0002425;1.14e-13;2 | |ontology_enrichment_development_v019=CL:0002427;6.72e-26;1!CL:0000954;1.14e-13;2!CL:0002425;1.14e-13;2 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:154;1.14e-13;2!DOID:4236;1.14e-13;2!DOID:1909;1.14e-13;2 | |ontology_enrichment_disease_v019=DOID:154;1.14e-13;2!DOID:4236;1.14e-13;2!DOID:1909;1.14e-13;2 | ||
|ontology_enrichment_disease_v019_2=DOID:1909,8.28e-14,2;DOID:154,9.40e-14,2;DOID:4236,9.40e-14,2 | |||
|ontology_enrichment_uberon=UBERON:0004177!3.37e-11!7;UBERON:0002370!1.42e-09!4;UBERON:0005058!1.42e-09!4;UBERON:0009113!1.42e-09!4;UBERON:0003295!1.42e-09!4;UBERON:0005562!1.42e-09!4 | |ontology_enrichment_uberon=UBERON:0004177!3.37e-11!7;UBERON:0002370!1.42e-09!4;UBERON:0005058!1.42e-09!4;UBERON:0009113!1.42e-09!4;UBERON:0003295!1.42e-09!4;UBERON:0005562!1.42e-09!4 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,1.80e-07,4;UBERON:0005058,1.80e-07,4;UBERON:0009113,1.80e-07,4;UBERON:0003295,1.80e-07,4;UBERON:0005562,1.80e-07,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.152826811495903,0.246301768349837,0.314843125254717,0,0.767658796194425,0.154816123316076,0,0,0,0.154934401160603,0.284338464974843,0,0.553995408531877,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188242339542605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426730222566507,0,0,0,0,0,0,0,0,0,0,0.196709770113833,0.393010762749165,0.616804496998528,0,0.32592226663359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.14966148080576,0,0,0,0,0,0.150575119077773,0,0,0,0.821127996921047,0.201606743224732,0.802320587350522,0,0,0,0,0,0,0,0,0,0.0945348171640679,0,0.087834785693126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132529768321485,0,0,0,0.72995471815166,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112085143993527,0.591092280605782,1.07813787429759,0.513372145118994,0.254094624222463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184369168541703,0,0.195801157462741,0,0,0,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223874754722178,0,0,0,0,0,0,0.183138929636687,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.281695602532241,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320472213382419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343505344755765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.494411622680279,0.63337622438398,0,0,0,0.20453736500431,0.123084805461069,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1137934482855,0,0,1.03423011972439,0.291604613383254,0,0,0,0,0,0,0,0,0,0,0.113942055847001,0,0,0,0,0,0,0,0,0,0,0,0.167821586975843,0.569261198172555,0,0,0.163232808159148,0.141353071433941,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300646838828985,0.311064574191741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137041924646751,0.397429223405979,0,0,0,0,0,0.144090417154106,0,0,0.14405479798815,0,0,0,0.209205692624666,0,0.577901179803038,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.321506296930038,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164185041498678,0,0.113312091520126,0,0,0,0,0,0,0.106787412567695,0,0,0,0,0.365377795142688,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124980407962107,1.51649117541648,0,0,0,0.434763085832475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192914038270915,0,0,0,0,0,0,0,0,1.31043939538565,0,0,0,0,0,0,0,0,0,0,0,5.50430796495637,0,0,0,0.123935764259002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261906694481422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26757386311357,0,0,0,0.118193840883968,0,0,0,0,0,0,0,0,0.158013611732727,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111855431797792,0,0,0,0,0,0,0,0,0,0,0.109940516745429,0,0,0,0,0,0,0,0,0,0,0.0939839179798536,0,0.0999411559249289,0,0,0,0,0,0,0,0,0,0,0,0,0,5.92982196724871,0.874124575709564,0.380095503034311,0,0,0,0,0,0,0,0,0,0,0.0645889098360061,0.0620747142958579,0.112131862580613,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.152826811495903,0.246301768349837,0.314843125254717,0,0.767658796194425,0.154816123316076,0,0,0,0.154934401160603,0.284338464974843,0,0.553995408531877,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188242339542605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426730222566507,0,0,0,0,0,0,0,0,0,0,0.196709770113833,0.393010762749165,0.616804496998528,0,0.32592226663359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.14966148080576,0,0,0,0,0,0.150575119077773,0,0,0,0.821127996921047,0.201606743224732,0.802320587350522,0,0,0,0,0,0,0,0,0,0.0945348171640679,0,0.087834785693126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132529768321485,0,0,0,0.72995471815166,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112085143993527,0.591092280605782,1.07813787429759,0.513372145118994,0.254094624222463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184369168541703,0,0.195801157462741,0,0,0,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223874754722178,0,0,0,0,0,0,0.183138929636687,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.281695602532241,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320472213382419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343505344755765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.494411622680279,0.63337622438398,0,0,0,0.20453736500431,0.123084805461069,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1137934482855,0,0,1.03423011972439,0.291604613383254,0,0,0,0,0,0,0,0,0,0,0.113942055847001,0,0,0,0,0,0,0,0,0,0,0,0.167821586975843,0.569261198172555,0,0,0.163232808159148,0.141353071433941,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300646838828985,0.311064574191741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137041924646751,0.397429223405979,0,0,0,0,0,0.144090417154106,0,0,0.14405479798815,0,0,0,0.209205692624666,0,0.577901179803038,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.321506296930038,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164185041498678,0,0.113312091520126,0,0,0,0,0,0,0.106787412567695,0,0,0,0,0.365377795142688,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124980407962107,1.51649117541648,0,0,0,0.434763085832475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192914038270915,0,0,0,0,0,0,0,0,1.31043939538565,0,0,0,0,0,0,0,0,0,0,0,5.50430796495637,0,0,0,0.123935764259002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261906694481422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26757386311357,0,0,0,0.118193840883968,0,0,0,0,0,0,0,0,0.158013611732727,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111855431797792,0,0,0,0,0,0,0,0,0,0,0.109940516745429,0,0,0,0,0,0,0,0,0,0,0.0939839179798536,0,0.0999411559249289,0,0,0,0,0,0,0,0,0,0,0,0,0,5.92982196724871,0.874124575709564,0.380095503034311,0,0,0,0,0,0,0,0,0,0,0.0645889098360061,0.0620747142958579,0.112131862580613,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr14:22974965..22974974,- | |short_description=p@chr14:22974965..22974974,- | ||
}} | }} |
Latest revision as of 19:14, 24 July 2015
Short description: | p@chr14:22974965..22974974, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr14:22974965..22974974, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
thymus | 1.80e-07 | 4 |
hemolymphoid system gland | 1.80e-07 | 4 |
thymic region | 1.80e-07 | 4 |
pharyngeal gland | 1.80e-07 | 4 |
thymus primordium | 1.80e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
melanoma | 8.28e-14 | 2 |
mixed cell type cancer | 9.40e-14 | 2 |
carcinosarcoma | 9.40e-14 | 2 |