FFCP PHASE1:Hg19::chr1:26372602..26372617,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr1:26372602..26372617,-
|short_description=p1@SLC30A2
|description=CAGE_peak_1_at_SLC30A2_5end
|association_with_transcript=0bp_to_ENST00000374278,NM_00100443...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=7780 | |EntrezGene=7780 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11013 | |HGNC=11013 | ||
|TSSclassifier=strong | |||
|UniProt=Q9BRI3,B3KSN7 | |UniProt=Q9BRI3,B3KSN7 | ||
|association_with_transcript=0bp_to_ENST00000374278,NM_001004434,NM_032513,uc001blg.1,uc001blh.1_5end | |||
|cluster_id=chr1:26372602..26372617,- | |||
|coexpression_cluster_id=C27 | |||
|description=CAGE_peak_1_at_SLC30A2_5end | |||
|id=chr1:26372602..26372617,- | |||
|ontology_enrichment_celltype=CL:0000039!4.64e-14!7;CL:0000586!4.64e-14!7;CL:0002541!1.20e-07!3;CL:0002274!2.25e-07!5;CL:0000457!2.25e-07!5;CL:0002191!2.25e-07!5;CL:0000097!2.25e-07!5;CL:0000831!2.25e-07!5;CL:0002028!2.25e-07!5 | |||
|ontology_enrichment_celltype_v019=CL:0002537;1.65e-09;5!CL:0000097;1.70e-09;5!CL:0000349;3.12e-09;19!CL:0002541;4.34e-08;3!CL:0000039;7.24e-07;7!CL:0000586;7.24e-07;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0002537,1.47e-09,5;CL:0000097,1.75e-09,5;CL:0002028,1.75e-09,5;CL:0000349,2.86e-09,19;CL:0002541,4.06e-08,3;CL:0000039,7.32e-07,7;CL:0000586,7.32e-07,7 | |||
|ontology_enrichment_development_v019=UBERON:0003104;5.51e-07;31!UBERON:0003124;7.90e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:114;3.50e-11;2 | |||
|ontology_enrichment_disease_v019_2=DOID:114,3.00e-11,2 | |||
|ontology_enrichment_uberon=UBERON:0005631!1.29e-14!14;UBERON:0000158!1.29e-14!14;UBERON:0000478!3.02e-09!24;UBERON:0000160!1.53e-08!27;UBERON:0003124!1.79e-08!7;UBERON:0003135!3.19e-08!11;UBERON:0000305!9.03e-08!7;UBERON:0000476!1.20e-07!3;UBERON:0000920!1.20e-07!3;UBERON:0005409!4.12e-07!35;UBERON:0004871!9.74e-07!8 | |||
|ontology_enrichment_uberon_v019=UBERON:0005631;1.26e-12;10!UBERON:0000158;1.26e-12;10!UBERON:0000478;1.40e-12;24!UBERON:0000160;1.37e-09;17!UBERON:0003124;4.34e-08;3!UBERON:0000920;4.34e-08;3!UBERON:0005409;2.25e-07;22!UBERON:0000305;6.47e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,2.03e-17,14;UBERON:0000158,2.03e-17,14;UBERON:0000478,1.26e-12,24;UBERON:0003124,1.39e-12,7;UBERON:0000160,1.43e-09,17;UBERON:0000920,4.06e-08,3;UBERON:0000305,5.95e-07,7 | |||
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| ||
|short_description=p1@SLC30A2 | |||
}} | }} |
Latest revision as of 04:38, 17 September 2015
Short description: | p1@SLC30A2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SLC30A2_5end |
Coexpression cluster: | C27_pancreas_temporal_duodenum_salivary_ductus_umbilical_lung |
Association with transcript: | 0bp_to_ENST00000374278, NM_001004434, NM_032513, uc001blg.1, uc001blh.1_5end |
EntrezGene: | SLC30A2 |
HGNC: | 11013 |
UniProt: | Q9BRI3B3KSN7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
amnion mesenchymal stem cell | 1.47e-09 | 5 |
mast cell | 1.75e-09 | 5 |
basophil mast progenitor cell | 1.75e-09 | 5 |
extraembryonic cell | 2.86e-09 | 19 |
chorionic membrane mesenchymal stem cell | 4.06e-08 | 3 |
germ line cell | 7.32e-07 | 7 |
germ cell | 7.32e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 2.03e-17 | 14 |
membranous layer | 2.03e-17 | 14 |
extraembryonic structure | 1.26e-12 | 24 |
chorion | 1.39e-12 | 7 |
intestine | 1.43e-09 | 17 |
egg chorion | 4.06e-08 | 3 |
amnion | 5.95e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
heart disease | 3.00e-11 | 2 |