FFCP PHASE1:Hg19::chr17:26127550..26127556,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4843 | |EntrezGene=4843 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7873 | |HGNC=7873 | ||
|TSSclassifier=strong | |||
|UniProt=F8WEM3,P35228 | |UniProt=F8WEM3,P35228 | ||
|association_with_transcript=0bp_to_ENST00000302153,ENST00000379105,NM_000625,uc002gzu.2,uc010wab.1_5end | |association_with_transcript=0bp_to_ENST00000302153,ENST00000379105,NM_000625,uc002gzu.2,uc010wab.1_5end | ||
|cluster_id=chr17:26127550..26127556,- | |||
|coexpression_cluster_id=C243 | |coexpression_cluster_id=C243 | ||
|description=CAGE_peak_1_at_NOS2_5end | |description=CAGE_peak_1_at_NOS2_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:1001319!8.98e-07!1;CL:1000600!8.98e-07!1 | |ontology_enrichment_celltype=CL:1001319!8.98e-07!1;CL:1000600!8.98e-07!1 | ||
|ontology_enrichment_celltype_v019=CL:0000138;3.74e-12;6!CL:1000415;1.57e-09;2!CL:0000153;2.09e-08;9!CL:0000447;2.09e-08;9!CL:0002178;7.92e-07;3 | |ontology_enrichment_celltype_v019=CL:0000138;3.74e-12;6!CL:1000415;1.57e-09;2!CL:0000153;2.09e-08;9!CL:0000447;2.09e-08;9!CL:0002178;7.92e-07;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0000058,3.44e-12,6;CL:0000138,3.44e-12,6;CL:1000415,1.57e-09,2;CL:0000153,1.97e-08,9;CL:0000447,1.97e-08,9;CL:0002178,8.15e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0001045;3.75e-18;1!UBERON:0006965;1.86e-09;2 | |ontology_enrichment_development_v019=UBERON:0001045;3.75e-18;1!UBERON:0006965;1.86e-09;2 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3910;1.86e-09;2 | |ontology_enrichment_disease_v019=DOID:3910;1.86e-09;2 | ||
|ontology_enrichment_disease_v019_2=DOID:3910,1.86e-09,2 | |||
|ontology_enrichment_uberon=UBERON:0001042!1.42e-13!10;UBERON:0009145!1.42e-13!10;UBERON:0004921!4.81e-13!129;UBERON:0004185!4.81e-13!129;UBERON:0006562!2.53e-12!11;UBERON:0000341!2.64e-12!2;UBERON:0000160!5.06e-12!27;UBERON:0005409!1.63e-11!35;UBERON:0001007!1.86e-11!155;UBERON:0001555!1.86e-11!155;UBERON:0007026!1.86e-11!155;UBERON:0004907!3.95e-11!5;UBERON:0003350!1.28e-10!5;UBERON:0004119!3.81e-10!169;UBERON:0000925!3.81e-10!169;UBERON:0006595!3.81e-10!169;UBERON:0000974!5.30e-09!10;UBERON:0000059!1.07e-08!11;UBERON:0001723!2.16e-08!3;UBERON:0001033!2.16e-08!3;UBERON:0010056!2.16e-08!3;UBERON:0000077!1.04e-07!130;UBERON:0000060!1.12e-07!12;UBERON:0000344!1.33e-07!12;UBERON:0001154!2.36e-07!1;UBERON:0001153!2.36e-07!1;UBERON:0001046!2.37e-07!19;UBERON:0001557!4.88e-07!19;UBERON:0000065!5.12e-07!53;UBERON:0002372!6.76e-07!1;UBERON:0001961!6.76e-07!1;UBERON:0001744!6.76e-07!1;UBERON:0001735!6.76e-07!1;UBERON:0004645!8.98e-07!1;UBERON:0001256!8.98e-07!1;UBERON:0001259!8.98e-07!1 | |ontology_enrichment_uberon=UBERON:0001042!1.42e-13!10;UBERON:0009145!1.42e-13!10;UBERON:0004921!4.81e-13!129;UBERON:0004185!4.81e-13!129;UBERON:0006562!2.53e-12!11;UBERON:0000341!2.64e-12!2;UBERON:0000160!5.06e-12!27;UBERON:0005409!1.63e-11!35;UBERON:0001007!1.86e-11!155;UBERON:0001555!1.86e-11!155;UBERON:0007026!1.86e-11!155;UBERON:0004907!3.95e-11!5;UBERON:0003350!1.28e-10!5;UBERON:0004119!3.81e-10!169;UBERON:0000925!3.81e-10!169;UBERON:0006595!3.81e-10!169;UBERON:0000974!5.30e-09!10;UBERON:0000059!1.07e-08!11;UBERON:0001723!2.16e-08!3;UBERON:0001033!2.16e-08!3;UBERON:0010056!2.16e-08!3;UBERON:0000077!1.04e-07!130;UBERON:0000060!1.12e-07!12;UBERON:0000344!1.33e-07!12;UBERON:0001154!2.36e-07!1;UBERON:0001153!2.36e-07!1;UBERON:0001046!2.37e-07!19;UBERON:0001557!4.88e-07!19;UBERON:0000065!5.12e-07!53;UBERON:0002372!6.76e-07!1;UBERON:0001961!6.76e-07!1;UBERON:0001744!6.76e-07!1;UBERON:0001735!6.76e-07!1;UBERON:0004645!8.98e-07!1;UBERON:0001256!8.98e-07!1;UBERON:0001259!8.98e-07!1 | ||
|ontology_enrichment_uberon_v019=UBERON:0001154;3.75e-18;1!UBERON:0001153;3.75e-18;1!UBERON:0009854;3.75e-18;1!UBERON:0005409;3.88e-18;22!UBERON:0009856;1.71e-17;4!UBERON:0000160;3.81e-15;17!UBERON:0004907;2.11e-14;5!UBERON:0000059;2.63e-14;11!UBERON:0004921;5.99e-11;33!UBERON:0003127;8.69e-10;2!UBERON:0000341;1.86e-09;2!UBERON:0004903;1.86e-09;2!UBERON:0002173;1.86e-09;2!UBERON:0002186;1.86e-09;2!UBERON:0001155;2.25e-08;9!UBERON:0002110;9.12e-07;3 | |ontology_enrichment_uberon_v019=UBERON:0001154;3.75e-18;1!UBERON:0001153;3.75e-18;1!UBERON:0009854;3.75e-18;1!UBERON:0005409;3.88e-18;22!UBERON:0009856;1.71e-17;4!UBERON:0000160;3.81e-15;17!UBERON:0004907;2.11e-14;5!UBERON:0000059;2.63e-14;11!UBERON:0004921;5.99e-11;33!UBERON:0003127;8.69e-10;2!UBERON:0000341;1.86e-09;2!UBERON:0004903;1.86e-09;2!UBERON:0002173;1.86e-09;2!UBERON:0002186;1.86e-09;2!UBERON:0001155;2.25e-08;9!UBERON:0002110;9.12e-07;3 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001154,3.75e-18,1;UBERON:0001153,3.75e-18,1;UBERON:0001045,3.75e-18,1;UBERON:0005409,4.87e-16,25;UBERON:0000160,3.95e-15,17;UBERON:0004907,2.11e-14,5;UBERON:0000059,2.82e-14,11;UBERON:0003127,8.69e-10,2;UBERON:0004903,1.86e-09,2;UBERON:0002173,1.86e-09,2;UBERON:0002186,1.86e-09,2;UBERON:0000341,2.02e-09,2;UBERON:0001155,2.37e-08,9;UBERON:0002110,9.12e-07,3;UBERON:0006242,9.12e-07,3 | |||
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|short_description=p1@NOS2 | |short_description=p1@NOS2 | ||
}} | }} |
Latest revision as of 04:15, 19 September 2015
Short description: | p1@NOS2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_NOS2_5end |
Coexpression cluster: | C243_Chondrocyte_trachea_Synoviocyte_mesodermal_renal_Fibroblast_Ewing |
Association with transcript: | 0bp_to_ENST00000302153, ENST00000379105, NM_000625, uc002gzu.2, uc010wab.1_5end |
EntrezGene: | NOS2 |
HGNC: | 7873 |
UniProt: | F8WEM3P35228 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chondroblast | 3.44e-12 | 6 |
chondrocyte | 3.44e-12 | 6 |
epithelial cell of gall bladder | 1.57e-09 | 2 |
GAG secreting cell | 1.97e-08 | 9 |
carbohydrate secreting cell | 1.97e-08 | 9 |
epithelial cell of stomach | 8.15e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
vermiform appendix | 3.75e-18 | 1 |
caecum | 3.75e-18 | 1 |
midgut | 3.75e-18 | 1 |
gastrointestinal system | 4.87e-16 | 25 |
intestine | 3.95e-15 | 17 |
lower digestive tract | 2.11e-14 | 5 |
large intestine | 2.82e-14 | 11 |
open tracheal system trachea | 8.69e-10 | 2 |
bronchoalveolar duct junction | 1.86e-09 | 2 |
alveolar duct | 1.86e-09 | 2 |
bronchiole | 1.86e-09 | 2 |
throat | 2.02e-09 | 2 |
colon | 2.37e-08 | 9 |
gallbladder | 9.12e-07 | 3 |
gall bladder primordium | 9.12e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
lung adenocarcinoma | 1.86e-09 | 2 |