FFCP PHASE1:Hg19::chr13:52553162..52553174,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=540 | |EntrezGene=540 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=870 | |HGNC=870 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-35bp_to_uc010tgw.1_5end | |association_with_transcript=-35bp_to_uc010tgw.1_5end | ||
|cluster_id=chr13:52553162..52553174,- | |||
|coexpression_cluster_id=C1 | |coexpression_cluster_id=C1 | ||
|description=CAGE_peak_7_at_ATP7B_5end | |description=CAGE_peak_7_at_ATP7B_5end | ||
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|ontology_enrichment_celltype=CL:0002563!1.56e-12!4;CL:0000764!3.28e-07!2;CL:0000765!3.28e-07!2;CL:0000050!3.28e-07!2;CL:0000038!3.28e-07!2;CL:0000558!3.28e-07!2;CL:0000547!3.28e-07!2;CL:0000549!3.28e-07!2;CL:0000550!3.28e-07!2;CL:0000552!3.28e-07!2;CL:0002253!4.17e-07!2 | |ontology_enrichment_celltype=CL:0002563!1.56e-12!4;CL:0000764!3.28e-07!2;CL:0000765!3.28e-07!2;CL:0000050!3.28e-07!2;CL:0000038!3.28e-07!2;CL:0000558!3.28e-07!2;CL:0000547!3.28e-07!2;CL:0000549!3.28e-07!2;CL:0000550!3.28e-07!2;CL:0000552!3.28e-07!2;CL:0002253!4.17e-07!2 | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0009117;6.99e-21;10!UBERON:0005564;6.99e-21;10 | |ontology_enrichment_development_v019=UBERON:0009117;6.99e-21;10!UBERON:0005564;6.99e-21;10 | ||
|ontology_enrichment_disease=DOID:1036!6.30e-14!8 | |ontology_enrichment_disease=DOID:1036!6.30e-14!8 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001242!1.56e-12!4;UBERON:0001262!1.56e-12!4;UBERON:0004786!1.56e-12!4;UBERON:0004808!1.56e-12!4;UBERON:0001277!1.56e-12!4;UBERON:0003350!3.27e-10!5;UBERON:0005409!6.29e-08!35;UBERON:0000473!5.54e-07!8 | |ontology_enrichment_uberon=UBERON:0001242!1.56e-12!4;UBERON:0001262!1.56e-12!4;UBERON:0004786!1.56e-12!4;UBERON:0004808!1.56e-12!4;UBERON:0001277!1.56e-12!4;UBERON:0003350!3.27e-10!5;UBERON:0005409!6.29e-08!35;UBERON:0000473!5.54e-07!8 | ||
|ontology_enrichment_uberon_v019=UBERON:0000473;8.65e-26;8!UBERON:0003135;4.28e-19;11!UBERON:0000991;1.53e-10;21!UBERON:0003101;4.14e-10;22!UBERON:0000079;4.14e-10;22!UBERON:0001871;2.26e-08;6 | |ontology_enrichment_uberon_v019=UBERON:0000473;8.65e-26;8!UBERON:0003135;4.28e-19;11!UBERON:0000991;1.53e-10;21!UBERON:0003101;4.14e-10;22!UBERON:0000079;4.14e-10;22!UBERON:0001871;2.26e-08;6 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,8.65e-26,8;UBERON:0003135,4.28e-19,11;UBERON:0000991,1.53e-10,21;UBERON:0009196,1.53e-10,21;UBERON:0009117,1.53e-10,21;UBERON:0005564,1.53e-10,21;UBERON:0004176,4.14e-10,22;UBERON:0003101,4.14e-10,22;UBERON:0000079,4.14e-10,22;UBERON:0001871,2.35e-08,6 | |||
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|short_description=p7@ATP7B | |short_description=p7@ATP7B | ||
}} | }} |
Latest revision as of 19:10, 17 September 2015
Short description: | p7@ATP7B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_ATP7B_5end |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | -35bp_to_uc010tgw.1_5end |
EntrezGene: | ATP7B |
HGNC: | 870 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
testis | 8.65e-26 | 8 |
male reproductive organ | 4.28e-19 | 11 |
gonad | 1.53e-10 | 21 |
indifferent external genitalia | 1.53e-10 | 21 |
indifferent gonad | 1.53e-10 | 21 |
gonad primordium | 1.53e-10 | 21 |
external genitalia | 4.14e-10 | 22 |
male organism | 4.14e-10 | 22 |
male reproductive system | 4.14e-10 | 22 |
temporal lobe | 2.35e-08 | 6 |