FFCP PHASE1:Hg19::chr1:29241178..29241189,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr1:29241178..29241189,+
|short_description=p8@EPB41
|description=CAGE_peak_8_at_EPB41_5end
|association_with_transcript=87bp_to_ENST00000373797,uc001brk.2,uc0...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=2035 | |EntrezGene=2035 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3377 | |HGNC=3377 | ||
|TSSclassifier=strong | |||
|UniProt=P11171,Q4VB86 | |UniProt=P11171,Q4VB86 | ||
|association_with_transcript=87bp_to_ENST00000373797,uc001brk.2,uc001brl.1,uc009vtk.1_5end | |||
|cluster_id=chr1:29241178..29241189,+ | |||
|description=CAGE_peak_8_at_EPB41_5end | |||
|id=chr1:29241178..29241189,+ | |||
|ontology_enrichment_celltype=CL:0000542!1.49e-08!53;CL:0000051!1.49e-08!53;CL:0000838!3.44e-08!52;CL:0000791!1.80e-07!18;CL:0000789!1.80e-07!18;CL:0002420!1.80e-07!18;CL:0002419!1.80e-07!18;CL:0000790!1.80e-07!18 | |||
|ontology_enrichment_celltype_v019=CL:0000123;1.66e-09;2!CL:0000242;1.66e-09;2!CL:0002322;2.05e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000242,1.74e-09,2;CL:0002322,1.99e-07,5 | |||
|ontology_enrichment_development_v019=UBERON:0006215;9.50e-14;3 | |||
|ontology_enrichment_disease=DOID:3095!1.77e-10!22;DOID:2994!1.77e-10!22;DOID:162!2.85e-10!235;DOID:14566!9.00e-10!239;DOID:0050687!7.31e-07!143 | |||
|ontology_enrichment_disease_v019=DOID:3095;8.61e-08;22!DOID:2994;8.61e-08;22 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,8.52e-08,22;DOID:2994,8.52e-08,22 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0001905;1.66e-09;2!UBERON:0002757;1.66e-09;2!UBERON:0010134;1.66e-09;2!UBERON:0005408;1.66e-09;2!UBERON:0001899;1.66e-09;2!UBERON:0002037;4.70e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001905,1.74e-09,2;UBERON:0002757,1.74e-09,2;UBERON:0010134,1.74e-09,2;UBERON:0005408,1.74e-09,2;UBERON:0001899,1.74e-09,2;UBERON:0002037,4.77e-07,6;UBERON:0006215,4.77e-07,6 | |||
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| ||
|short_description=p8@EPB41 | |||
}} | }} |
Latest revision as of 11:12, 17 September 2015
Short description: | p8@EPB41 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_EPB41_5end |
Coexpression cluster: | NA |
Association with transcript: | 87bp_to_ENST00000373797, uc001brk.2, uc001brl.1, uc009vtk.1_5end |
EntrezGene: | EPB41 |
HGNC: | 3377 |
UniProt: | P11171Q4VB86 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Merkel cell | 1.74e-09 | 2 |
embryonic stem cell | 1.99e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
pineal body | 1.74e-09 | 2 |
regional part of epithalamus | 1.74e-09 | 2 |
secretory circumventricular organ | 1.74e-09 | 2 |
circumventricular organ | 1.74e-09 | 2 |
epithalamus | 1.74e-09 | 2 |
cerebellum | 4.77e-07 | 6 |
rhombic lip | 4.77e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 8.52e-08 | 22 |
germ cell cancer | 8.52e-08 | 22 |