FFCP PHASE1:Hg19::chr10:95353614..95353628,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(4 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:95353614..95353628,- | |||
|coexpression_cluster_id=C5 | |coexpression_cluster_id=C5 | ||
|description=CAGE_peak_at_chr10:95353614..95353628,- | |description=CAGE_peak_at_chr10:95353614..95353628,- | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000136!1.08e-14!15;CL:0000181!3.56e-14!12;CL:0000417!3.56e-14!12;CL:0000668!3.56e-14!12;CL:0000414!3.56e-14!12;CL:0000412!3.56e-14!12;CL:0000182!3.56e-14!12;CL:0002521!2.15e-07!3 | |ontology_enrichment_celltype=CL:0000136!1.08e-14!15;CL:0000181!3.56e-14!12;CL:0000417!3.56e-14!12;CL:0000668!3.56e-14!12;CL:0000414!3.56e-14!12;CL:0000412!3.56e-14!12;CL:0000182!3.56e-14!12;CL:0002521!2.15e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000182;3.06e-18;12!CL:0000136;1.58e-16;13!CL:0002617;5.55e-08;2 | |ontology_enrichment_celltype_v019=CL:0000182;3.06e-18;12!CL:0000136;1.58e-16;13!CL:0002617;5.55e-08;2 | ||
|ontology_enrichment_celltype_v019_2=CL:0000182,3.13e-18,12;CL:0000136,2.49e-14,15;CL:0002617,5.02e-08,2 | |||
|ontology_enrichment_development_v019=UBERON:0004161;1.76e-11;11!UBERON:0009497;8.40e-10;13 | |ontology_enrichment_development_v019=UBERON:0004161;1.76e-11;11!UBERON:0009497;8.40e-10;13 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!2.73e-15!19;UBERON:0006925!2.73e-15!19;UBERON:0008836!2.73e-15!19;UBERON:0008835!5.08e-13!22;UBERON:0003894!5.08e-13!22;UBERON:0009854!2.14e-12!23;UBERON:0007499!2.69e-11!25;UBERON:0009497!2.69e-11!25;UBERON:0000015!2.69e-11!25;UBERON:0002423!2.69e-11!25;UBERON:0006235!2.69e-11!25;UBERON:0004161!2.69e-11!25;UBERON:0005057!8.25e-11!26;UBERON:0009856!8.25e-11!26;UBERON:0002368!9.98e-10!35;UBERON:0002365!7.51e-09!31;UBERON:0002330!7.51e-09!31;UBERON:0003929!1.43e-08!54;UBERON:0002190!2.15e-07!3;UBERON:0000949!3.31e-07!45 | |ontology_enrichment_uberon=UBERON:0002107!2.73e-15!19;UBERON:0006925!2.73e-15!19;UBERON:0008836!2.73e-15!19;UBERON:0008835!5.08e-13!22;UBERON:0003894!5.08e-13!22;UBERON:0009854!2.14e-12!23;UBERON:0007499!2.69e-11!25;UBERON:0009497!2.69e-11!25;UBERON:0000015!2.69e-11!25;UBERON:0002423!2.69e-11!25;UBERON:0006235!2.69e-11!25;UBERON:0004161!2.69e-11!25;UBERON:0005057!8.25e-11!26;UBERON:0009856!8.25e-11!26;UBERON:0002368!9.98e-10!35;UBERON:0002365!7.51e-09!31;UBERON:0002330!7.51e-09!31;UBERON:0003929!1.43e-08!54;UBERON:0002190!2.15e-07!3;UBERON:0000949!3.31e-07!45 | ||
|ontology_enrichment_uberon_v019=UBERON:0002107;3.87e-25;19!UBERON:0006925;3.87e-25;19!UBERON:0002423;4.65e-19;25!UBERON:0002368;1.31e-17;33!UBERON:0002365;1.83e-14;31!UBERON:0002330;1.83e-14;31!UBERON:0000949;2.55e-11;43!UBERON:0000007;7.78e-08;2 | |ontology_enrichment_uberon_v019=UBERON:0002107;3.87e-25;19!UBERON:0006925;3.87e-25;19!UBERON:0002423;4.65e-19;25!UBERON:0002368;1.31e-17;33!UBERON:0002365;1.83e-14;31!UBERON:0002330;1.83e-14;31!UBERON:0000949;2.55e-11;43!UBERON:0000007;7.78e-08;2 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,4.21e-25,19;UBERON:0006925,4.21e-25,19;UBERON:0008836,4.21e-25,19;UBERON:0008835,1.18e-21,22;UBERON:0003894,1.18e-21,22;UBERON:0009854,1.05e-20,23;UBERON:0007499,4.96e-19,25;UBERON:0009497,4.96e-19,25;UBERON:0000015,4.96e-19,25;UBERON:0002423,4.96e-19,25;UBERON:0006235,4.96e-19,25;UBERON:0004161,4.96e-19,25;UBERON:0009856,2.73e-18,26;UBERON:0002368,3.50e-18,35;UBERON:0002365,2.66e-15,31;UBERON:0002330,2.66e-15,31;UBERON:0000949,4.95e-14,45;UBERON:0003929,1.30e-11,54;UBERON:0002530,1.42e-10,59;UBERON:0002417,2.31e-10,60;UBERON:0000916,2.31e-10,60;UBERON:0005172,1.19e-08,54;UBERON:0005173,1.19e-08,54;UBERON:0000007,7.03e-08,2;UBERON:0005911,1.90e-07,82;UBERON:0009569,7.52e-07,112 | |||
|phase1_expression=0,2.99740733447376,0,1.0007329835313,0,0,5.06599756336621,0,0.783556884599516,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117434498643765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,30.4212083572394,14.7424082501644,7.08947888017685,0,1.8448265781467,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.266422179016099,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.725156697549733,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.67906630284078,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.633322905892992,0,0,0,0,0,0,2.82431402330337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0,0,0,0.611030144933625,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144090417154106,0,0,0,0,0.235694034616795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.945398187686684,1.56590130924216,0.876246070104404,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.30174604815755,2.65013777824443,0.258565912723101,0,0,0,0,0,0,0,0,0,0,0,0.5013797880454,0.612691153526923,1.31149052283922,0,0,0.854183854313742,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251567901752575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496211178389294,0,0,0,0,1.82089681270989,0,0,0,0,0.0679697329768317,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.335566295393377,0,0,0,0,0,0.485710993059139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.73050624849516,0,0,0,0,0,0,0,0,0,0,0,0.213233981900981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.402547587182052,0 | |phase1_expression=0,2.99740733447376,0,1.0007329835313,0,0,5.06599756336621,0,0.783556884599516,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117434498643765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,30.4212083572394,14.7424082501644,7.08947888017685,0,1.8448265781467,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.266422179016099,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.725156697549733,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.67906630284078,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.633322905892992,0,0,0,0,0,0,2.82431402330337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0,0,0,0.611030144933625,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144090417154106,0,0,0,0,0.235694034616795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.945398187686684,1.56590130924216,0.876246070104404,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.30174604815755,2.65013777824443,0.258565912723101,0,0,0,0,0,0,0,0,0,0,0,0.5013797880454,0.612691153526923,1.31149052283922,0,0,0.854183854313742,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251567901752575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496211178389294,0,0,0,0,1.82089681270989,0,0,0,0,0.0679697329768317,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.335566295393377,0,0,0,0,0,0.485710993059139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.73050624849516,0,0,0,0,0,0,0,0,0,0,0,0.213233981900981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.402547587182052,0 | ||
|short_description=p@chr10:95353614..95353628,- | |short_description=p@chr10:95353614..95353628,- | ||
}} | }} |
Latest revision as of 16:53, 23 July 2015
Short description: | p@chr10:95353614..95353628, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:95353614..95353628, - |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 3.13e-18 | 12 |
fat cell | 2.49e-14 | 15 |
adipocyte of breast | 5.02e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
liver | 4.21e-25 | 19 |
digestive gland | 4.21e-25 | 19 |
liver bud | 4.21e-25 | 19 |
hepatic diverticulum | 1.18e-21 | 22 |
liver primordium | 1.18e-21 | 22 |
digestive tract diverticulum | 1.05e-20 | 23 |
epithelial sac | 4.96e-19 | 25 |
epithelium of foregut-midgut junction | 4.96e-19 | 25 |
anatomical boundary | 4.96e-19 | 25 |
hepatobiliary system | 4.96e-19 | 25 |
foregut-midgut junction | 4.96e-19 | 25 |
septum transversum | 4.96e-19 | 25 |
sac | 2.73e-18 | 26 |
endocrine gland | 3.50e-18 | 35 |
exocrine gland | 2.66e-15 | 31 |
exocrine system | 2.66e-15 | 31 |
endocrine system | 4.95e-14 | 45 |
gut epithelium | 1.30e-11 | 54 |
gland | 1.42e-10 | 59 |
abdominal segment of trunk | 2.31e-10 | 60 |
abdomen | 2.31e-10 | 60 |
abdomen element | 1.19e-08 | 54 |
abdominal segment element | 1.19e-08 | 54 |
pituitary gland | 7.03e-08 | 2 |
endo-epithelium | 1.90e-07 | 82 |
subdivision of trunk | 7.52e-07 | 112 |