FFCP PHASE1:Hg19::chr11:71639446..71639476,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt=E9PJW3,E9PP57 | |UniProt=E9PJW3,E9PP57 | ||
|association_with_transcript=0bp_to_ENST00000530333,ENST00000534704_5end | |association_with_transcript=0bp_to_ENST00000530333,ENST00000534704_5end | ||
|cluster_id=chr11:71639446..71639476,- | |||
|description=CAGE_peak_1_at_ENST00000530333_5end,CAGE_peak_1_at_ENST00000534704_5end | |description=CAGE_peak_1_at_ENST00000530333_5end,CAGE_peak_1_at_ENST00000534704_5end | ||
|id=chr11:71639446..71639476,- | |id=chr11:71639446..71639476,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002319;3.54e-07;25 | |ontology_enrichment_celltype_v019=CL:0002319;3.54e-07;25 | ||
|ontology_enrichment_celltype_v019_2=CL:0000333,3.19e-07,41;CL:0000037,5.02e-07,168;CL:0002319,5.82e-07,25;CL:0002032,9.41e-07,161;CL:0000837,9.41e-07,161 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:162!3.02e-38!235;DOID:14566!7.92e-37!239;DOID:2531!6.72e-27!51;DOID:0060083!6.72e-27!51;DOID:0050686!7.26e-23!137;DOID:1240!2.59e-21!39;DOID:8692!1.00e-16!31;DOID:0050687!1.90e-16!143;DOID:305!1.13e-13!106;DOID:0060058!4.94e-07!10 | |ontology_enrichment_disease=DOID:162!3.02e-38!235;DOID:14566!7.92e-37!239;DOID:2531!6.72e-27!51;DOID:0060083!6.72e-27!51;DOID:0050686!7.26e-23!137;DOID:1240!2.59e-21!39;DOID:8692!1.00e-16!31;DOID:0050687!1.90e-16!143;DOID:305!1.13e-13!106;DOID:0060058!4.94e-07!10 | ||
|ontology_enrichment_disease_v019=DOID:1240;4.75e-27;39!DOID:2531;4.65e-26;51!DOID:0060083;4.65e-26;51!DOID:8692;5.43e-25;31!DOID:0060058;1.70e-10;10!DOID:0050686;5.77e-08;137!DOID:1036;9.94e-07;8 | |ontology_enrichment_disease_v019=DOID:1240;4.75e-27;39!DOID:2531;4.65e-26;51!DOID:0060083;4.65e-26;51!DOID:8692;5.43e-25;31!DOID:0060058;1.70e-10;10!DOID:0050686;5.77e-08;137!DOID:1036;9.94e-07;8 | ||
|ontology_enrichment_disease_v019_2=DOID:2531,2.32e-42,51;DOID:0060083,2.32e-42,51;DOID:162,8.89e-37,235;DOID:1240,1.50e-35,39;DOID:14566,2.68e-35,239;DOID:0050686,5.13e-28,137;DOID:8692,5.98e-27,31;DOID:0060058,2.96e-10,10;DOID:0050687,7.93e-09,143;DOID:1036,4.96e-07,8 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0,0,0.873765488520689,1.05506791291381,0,0,0,0,0,0,0.861847406537515,1.02000345622126,0.313454721478088,1.14494394852423,0.136874425072884,1.63205431473244,2.90370941842215,2.95562122019805,2.83358812729245,0.393364276848904,0,0,0.919421224478927,0.30120591877825,0,6.04244164526353,4.97592313705975,5.28480790802725,0,0,0.217010870715852,0,0.647787332037959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320929027076094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209658645508376,0,0.150176892841506,0,0.285012743741249,0,0,1.75996244461323,0.546138611262131,0.889509253863555,0.426730222566507,0,0,0,0.954053754535364,0.569212969109448,0,0.382273228125229,0,0,2.10707267820062,0,0,0,0.334372990781356,0,0,0,0.222820913770347,0.294605907474837,0,0,0.25618263945135,0.390178042679635,1.15106533222573,1.38175008892924,0.289803085735052,0,0,0,0.906474741580529,0,0.34362744548263,0,0.318565414324097,0,0,0.752875595388864,0.255973222308837,0,0,0,0.201606743224732,0,0.144824403882799,0,0,0.12786256184353,0.722878304769133,0,0,0,0,0.378139268656271,0,0.175669571386252,1.37528029272598,0.364295288292542,0,0,0.174129737299267,0,0,0,0,0.596287222100115,1.72046919021225,0,0,0,0,1.04497483268405,0.258416759169329,0.35576626268671,0.66944122552934,0.805658634218294,0,0.24406205754817,0.735326160691737,0,0.892997282840798,0.898117490504679,0.563057402416611,0,0.949265659568129,0.183201743930407,0,0,0.436094052142534,0,0.25326102332916,0.132409180813219,0.286836620748814,0.354668382198357,0.560677600142307,0,0,0.933633106199299,0.269421344139376,0.490385709340376,0.302714855289863,0,0,0,0,0.149448680551801,1.40921398372518,1.45685649931318,1.68540968042698,0.204154171254893,0.61417158655884,0.309977343527296,0,0,0.910161361938026,0.718618141816238,1.68336113954066,2.25213335769535,0.831192346452549,0,0,0.300476117813194,0.226864366320042,1.07633781413317,0.427114777637135,0.211931901159562,0.900273288253207,0.309157587715317,0,0,1.18143432568886,0.194874010322397,1.00973509697646,0.184099797284599,0.161646056818812,0.355009592516614,0.10075209822764,0.508681776931463,0,0,0,0.731842236777572,1.32529768321485,0.580969714347592,1.45125477021519,1.00928340350251,1.82488679537915,0,0,2.76269842704961,0,0,0.709840800239063,0.505754070234305,0.723033089650446,0.55146986366197,0.871517776369625,0.71181185733329,0.674156540800822,0.784885860501384,0.769494313892781,0,1.40241773803446,0,0,0,0,0,7.94633578946371,1.47586126251736,0,0,0,1.00528972411631,0.0925884451585296,0,1.03993478527958,0,0.231860809950154,0,0.577465791044295,0,0,0.790204397959275,0.858486162094873,0,0,0.445893486866185,0,0.503946384596579,0,0.53735113621709,0.581267877027924,0,0.985326475791887,0.704387472105808,0.414656231081544,0.144119953416961,0,2.6669115602711,0,1.17217447210047,0,0.925447434329912,0,0.285826432630578,0.560655421726804,0,0.95339771567235,0,0,0,0,0,0.257207374262142,0,0.532844358032199,0,0.542621605391443,0.823240336780769,0,0,0,0.301439377059586,0,0,0,0,0,0,0,1.42636905040718,0.289562613335158,0.410952645100767,0.179060963239896,6.50093835162458,0,0,0,1.52456774533478,1.30139853857622,0,0.335032530668698,0,0,0,0,0,0,0,0,0.178428988797162,0,0.117141414992713,0,0,0,0.664225598535437,0.184369168541703,0.173767228936166,0,0.343143423810856,0,0,0.106727557803444,0,0,0.30239029332968,0,0.306923946576125,0.280660094433074,0,0,0.160853921143607,0,0.462629081407967,0,0.246381468041427,0,0.232420756919918,3.14234568938218,0,0,0.68888668898764,0.364182336013434,0,0.451199612907412,0.385076685522074,1.56869953835371,0,0.211103257785751,0,0,0,0,0.270946437543853,0.501689773854853,0.509752546090077,0,0,4.16593765627276,3.92153176537351,0.769350375349168,0,0.325378394664303,0,2.01452822600355,1.89771849817352,0,0,0,0.193341436584244,0.924291702687866,0.921022048356777,0.689182862422653,0.751941714077915,0.145016693914229,0.255679882248303,0.178064071293475,0,0,1.78657797492418,0,0,0,0,0.616067160352178,0,0,0.18532421910392,0.286249773483982,0,0.316379424718726,0.190630193923825,0,0,0.318203247925937,0,0,1.09814811894422,0.235624804691373,0,0,0.421258456238981,0.48763373908959,0.243713489631284,0,0.136499911407986,0.141405431953713,0,0,0,0.438450885253763,0,0.655894752046633,0,0.92947049429925,0,0.286822704408103,0,0.35667105148125,0.709522128141196,0.211107635297664,0,0,0,0.192444225451024,0,0,0.188287601553558,0,0,0,0,0,0,0.569647187174163,0,0,0.648473311192717,0,0,1.38871292465715,0.962479855263359,0,7.9895365304059,4.1838071763169,3.84165954081436,2.71024663638998,2.19537308576098,4.40462351304443,1.69338866179106,2.27235358192189,1.96558024679421,2.28234679033192,1.41011906195721,2.50634477090067,1.52362600021443,0.963528450622197,2.21979677910152,2.55507742614196,1.37402137902306,2.76516687877612,2.90778940260141,2.33588798396672,1.36771666781428,1.9488432172667,2.46174797895425,1.6227340708559,3.99686361597384,2.81974010175699,0.561421621224659,0.293016358543788,1.21360521749513,2.11742430127209,0.568272293612826,0,0.593929361665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| ||
|short_description=p1@ENST00000530333,p1@ENST00000534704 | |short_description=p1@ENST00000530333,p1@ENST00000534704 | ||
}} | }} |
Latest revision as of 23:54, 19 September 2015
Short description: | p1@ENST00000530333, p1@ENST00000534704 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000530333_5end, CAGE_peak_1_at_ENST00000534704_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000530333, ENST00000534704_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
migratory neural crest cell | 3.19e-07 | 41 |
hematopoietic stem cell | 5.02e-07 | 168 |
neural cell | 5.82e-07 | 25 |
hematopoietic oligopotent progenitor cell | 9.41e-07 | 161 |
hematopoietic multipotent progenitor cell | 9.41e-07 | 161 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 2.32e-42 | 51 |
immune system cancer | 2.32e-42 | 51 |
cancer | 8.89e-37 | 235 |
leukemia | 1.50e-35 | 39 |
disease of cellular proliferation | 2.68e-35 | 239 |
organ system cancer | 5.13e-28 | 137 |
myeloid leukemia | 5.98e-27 | 31 |
lymphoma | 2.96e-10 | 10 |
cell type cancer | 7.93e-09 | 143 |
chronic leukemia | 4.96e-07 | 8 |