FFCP PHASE1:Hg19::chr13:53625392..53625401,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr13:53625392..53625401,+ | |||
|coexpression_cluster_id=C124 | |coexpression_cluster_id=C124 | ||
|description=CAGE_peak_at_chr13:53625392..53625401,+ | |description=CAGE_peak_at_chr13:53625392..53625401,+ | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001155!2.00e-21!9;UBERON:0000059!1.37e-17!11;UBERON:0000160!4.94e-15!27;UBERON:0001154!3.33e-13!1;UBERON:0001153!3.33e-13!1;UBERON:0000989!3.76e-13!1;UBERON:0008811!3.76e-13!1;UBERON:0006258!3.76e-13!1;UBERON:0005876!3.76e-13!1;UBERON:0004874!3.76e-13!1;UBERON:0001301!6.82e-13!1;UBERON:0005409!1.29e-11!35;UBERON:0007023!7.48e-11!115;UBERON:0001954!4.69e-07!2;UBERON:0003022!4.69e-07!2;UBERON:0002421!4.69e-07!2;UBERON:0002600!4.69e-07!2 | |ontology_enrichment_uberon=UBERON:0001155!2.00e-21!9;UBERON:0000059!1.37e-17!11;UBERON:0000160!4.94e-15!27;UBERON:0001154!3.33e-13!1;UBERON:0001153!3.33e-13!1;UBERON:0000989!3.76e-13!1;UBERON:0008811!3.76e-13!1;UBERON:0006258!3.76e-13!1;UBERON:0005876!3.76e-13!1;UBERON:0004874!3.76e-13!1;UBERON:0001301!6.82e-13!1;UBERON:0005409!1.29e-11!35;UBERON:0007023!7.48e-11!115;UBERON:0001954!4.69e-07!2;UBERON:0003022!4.69e-07!2;UBERON:0002421!4.69e-07!2;UBERON:0002600!4.69e-07!2 | ||
|ontology_enrichment_uberon_v019=UBERON:0002108;2.45e-40;4!UBERON:0000160;1.73e-25;17!UBERON:0005409;3.51e-20;22!UBERON:0002114;7.35e-18;2!UBERON:0004921;1.12e-11;33!UBERON:0001871;1.96e-08;6!UBERON:0001555;1.74e-07;54!UBERON:0001155;8.85e-07;9 | |ontology_enrichment_uberon_v019=UBERON:0002108;2.45e-40;4!UBERON:0000160;1.73e-25;17!UBERON:0005409;3.51e-20;22!UBERON:0002114;7.35e-18;2!UBERON:0004921;1.12e-11;33!UBERON:0001871;1.96e-08;6!UBERON:0001555;1.74e-07;54!UBERON:0001155;8.85e-07;9 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002108,2.71e-40,4;UBERON:0000160,1.81e-25,17;UBERON:0005409,5.83e-18,25;UBERON:0002114,8.00e-18,2;UBERON:0001871,1.89e-08,6;UBERON:0001155,8.85e-07,9 | |||
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|short_description=p@chr13:53625392..53625401,+ | |short_description=p@chr13:53625392..53625401,+ | ||
}} | }} |
Latest revision as of 16:51, 24 July 2015
Short description: | p@chr13:53625392..53625401, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr13:53625392..53625401, + |
Coexpression cluster: | C124_small_temporal_duodenum_colon_gall_signet_Hepatocyte |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
small intestine | 2.71e-40 | 4 |
intestine | 1.81e-25 | 17 |
gastrointestinal system | 5.83e-18 | 25 |
duodenum | 8.00e-18 | 2 |
temporal lobe | 1.89e-08 | 6 |
colon | 8.85e-07 | 9 |