FFCP PHASE1:Hg19::chr12:123465379..123465397,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=51329 | |EntrezGene=51329 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18076 | |HGNC=18076 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-77bp_to_ENST00000392433_5end | |association_with_transcript=-77bp_to_ENST00000392433_5end | ||
|cluster_id=chr12:123465379..123465397,+ | |||
|coexpression_cluster_id=C477 | |coexpression_cluster_id=C477 | ||
|description=CAGE_peak_7_at_ARL6IP4_5end | |description=CAGE_peak_7_at_ARL6IP4_5end | ||
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|ontology_enrichment_celltype=CL:0000222!6.91e-08!119;CL:0000055!3.47e-07!180;CL:0000220!5.36e-07!246;CL:0002321!9.25e-07!248 | |ontology_enrichment_celltype=CL:0000222!6.91e-08!119;CL:0000055!3.47e-07!180;CL:0000220!5.36e-07!246;CL:0002321!9.25e-07!248 | ||
|ontology_enrichment_celltype_v019=CL:1000746;1.60e-07;7!CL:1000612;1.60e-07;7!CL:1000449;2.96e-07;15 | |ontology_enrichment_celltype_v019=CL:1000746;1.60e-07;7!CL:1000612;1.60e-07;7!CL:1000449;2.96e-07;15 | ||
|ontology_enrichment_celltype_v019_2=CL:1000746,8.17e-08,7;CL:1000612,8.17e-08,7;CL:1000449,2.74e-07,15 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:2531!1.64e-09!51;DOID:0060083!1.64e-09!51;DOID:1240!1.01e-08!39;DOID:162!2.08e-08!235;DOID:14566!5.26e-08!239;DOID:8692!1.61e-07!31 | |ontology_enrichment_disease=DOID:2531!1.64e-09!51;DOID:0060083!1.64e-09!51;DOID:1240!1.01e-08!39;DOID:162!2.08e-08!235;DOID:14566!5.26e-08!239;DOID:8692!1.61e-07!31 | ||
|ontology_enrichment_disease_v019=DOID:8692;5.22e-07;31!DOID:2531;6.75e-07;51!DOID:0060083;6.75e-07;51 | |ontology_enrichment_disease_v019=DOID:8692;5.22e-07;31!DOID:2531;6.75e-07;51!DOID:0060083;6.75e-07;51 | ||
|ontology_enrichment_disease_v019_2=DOID:2531,2.64e-08,51;DOID:0060083,2.64e-08,51;DOID:1240,1.44e-07,39 | |||
|ontology_enrichment_uberon=UBERON:0003914!6.25e-07!118 | |ontology_enrichment_uberon=UBERON:0003914!6.25e-07!118 | ||
|ontology_enrichment_uberon_v019=UBERON:0000074;1.60e-07;7!UBERON:0001229;1.60e-07;7!UBERON:0006555;2.96e-07;15!UBERON:0004819;2.96e-07;15!UBERON:0001285;2.96e-07;15!UBERON:0007684;2.96e-07;15 | |ontology_enrichment_uberon_v019=UBERON:0000074;1.60e-07;7!UBERON:0001229;1.60e-07;7!UBERON:0006555;2.96e-07;15!UBERON:0004819;2.96e-07;15!UBERON:0001285;2.96e-07;15!UBERON:0007684;2.96e-07;15 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0003914,7.77e-09,117;UBERON:0010532,8.17e-08,7;UBERON:0000074,8.17e-08,7;UBERON:0001229,8.17e-08,7;UBERON:0001230,8.17e-08,7;UBERON:0003220,8.17e-08,7;UBERON:0005749,8.17e-08,7;UBERON:0004199,8.17e-08,7;UBERON:0004209,8.17e-08,7;UBERON:0004198,8.17e-08,7;UBERON:0003104,1.79e-07,160;UBERON:0009142,1.79e-07,160;UBERON:0004211,2.74e-07,15;UBERON:0009773,2.74e-07,15;UBERON:0001231,2.74e-07,15;UBERON:0001285,2.74e-07,15;UBERON:0007684,2.74e-07,15;UBERON:0004208,2.74e-07,15 | |||
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| ||
|short_description=p7@ARL6IP4 | |short_description=p7@ARL6IP4 | ||
}} | }} |
Latest revision as of 01:10, 17 September 2015
Short description: | p7@ARL6IP4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_ARL6IP4_5end |
Coexpression cluster: | C477_Mesenchymal_Amniotic_Placental_chorionic_umbilical_Cardiac_acute |
Association with transcript: | -77bp_to_ENST00000392433_5end |
EntrezGene: | ARL6IP4 |
HGNC: | 18076 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
glomerular cell | 8.17e-08 | 7 |
kidney corpuscule cell | 8.17e-08 | 7 |
epithelial cell of nephron | 2.74e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
epithelial tube | 7.77e-09 | 117 |
primitive nephron | 8.17e-08 | 7 |
renal glomerulus | 8.17e-08 | 7 |
renal corpuscle | 8.17e-08 | 7 |
glomerular capsule | 8.17e-08 | 7 |
metanephric mesenchyme | 8.17e-08 | 7 |
glomerular tuft | 8.17e-08 | 7 |
S-shaped body | 8.17e-08 | 7 |
renal vesicle | 8.17e-08 | 7 |
comma-shaped body | 8.17e-08 | 7 |
mesenchyme | 1.79e-07 | 160 |
entire embryonic mesenchyme | 1.79e-07 | 160 |
nephron epithelium | 2.74e-07 | 15 |
renal tubule | 2.74e-07 | 15 |
nephron tubule | 2.74e-07 | 15 |
nephron | 2.74e-07 | 15 |
uriniferous tubule | 2.74e-07 | 15 |
nephrogenic mesenchyme | 2.74e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 2.64e-08 | 51 |
immune system cancer | 2.64e-08 | 51 |
leukemia | 1.44e-07 | 39 |