FFCP PHASE1:Hg19::chr20:50216740..50216752,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10079 | |EntrezGene=10079 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=13540 | |HGNC=13540 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=10bp_to_AK025559_5end | |association_with_transcript=10bp_to_AK025559_5end | ||
|cluster_id=chr20:50216740..50216752,- | |||
|coexpression_cluster_id=C14 | |coexpression_cluster_id=C14 | ||
|description=CAGE_peak_12_at_ATP9A_5end | |description=CAGE_peak_12_at_ATP9A_5end | ||
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|ontology_enrichment_celltype=CL:0002543!1.66e-14!6;CL:0000094!3.40e-10!8;CL:0000081!1.67e-09!11;CL:0002618!5.69e-08!3;CL:0000767!1.57e-07!3;CL:0000842!1.57e-07!3;CL:0000071!3.03e-07!18;CL:0002546!3.03e-07!18;CL:0000115!4.61e-07!35 | |ontology_enrichment_celltype=CL:0002543!1.66e-14!6;CL:0000094!3.40e-10!8;CL:0000081!1.67e-09!11;CL:0002618!5.69e-08!3;CL:0000767!1.57e-07!3;CL:0000842!1.57e-07!3;CL:0000071!3.03e-07!18;CL:0002546!3.03e-07!18;CL:0000115!4.61e-07!35 | ||
|ontology_enrichment_celltype_v019=CL:0002543;1.17e-32;6!CL:0000115;5.06e-18;36!CL:0000094;4.44e-16;8!CL:0000071;2.77e-15;18!CL:0002139;2.88e-15;24!CL:0000081;9.42e-12;11!CL:0000767;1.68e-11;3!CL:0002618;2.44e-11;3!CL:0002078;1.05e-10;45!CL:0000213;2.10e-08;58!CL:0000215;2.10e-08;58!CL:0002188;3.04e-07;5 | |ontology_enrichment_celltype_v019=CL:0002543;1.17e-32;6!CL:0000115;5.06e-18;36!CL:0000094;4.44e-16;8!CL:0000071;2.77e-15;18!CL:0002139;2.88e-15;24!CL:0000081;9.42e-12;11!CL:0000767;1.68e-11;3!CL:0002618;2.44e-11;3!CL:0002078;1.05e-10;45!CL:0000213;2.10e-08;58!CL:0000215;2.10e-08;58!CL:0002188;3.04e-07;5 | ||
|ontology_enrichment_celltype_v019_2=CL:0002543,7.35e-33,6;CL:0000115,2.97e-20,36;CL:0000094,4.71e-16,8;CL:0002078,6.79e-16,45;CL:0002139,2.52e-15,24;CL:0000071,2.60e-15,18;CL:0002546,2.60e-15,18;CL:0000213,5.53e-12,58;CL:0000215,5.53e-12,58;CL:0000081,9.83e-12,11;CL:0000767,1.77e-11,3;CL:0002618,1.97e-11,3;CL:0002188,3.45e-07,5 | |||
|ontology_enrichment_development_v019=CL:0002546;2.77e-15;18 | |ontology_enrichment_development_v019=CL:0002546;2.77e-15;18 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000178!1.19e-21!15;UBERON:0000179!1.19e-21!15;UBERON:0000463!1.19e-21!15;UBERON:0007023!4.78e-12!115;UBERON:0001638!2.39e-09!9;UBERON:0003920!2.39e-09!9;UBERON:0004582!2.39e-09!9;UBERON:0002780!2.53e-08!41;UBERON:0001890!2.53e-08!41;UBERON:0006240!2.53e-08!41;UBERON:0003080!4.79e-08!42;UBERON:0004535!1.67e-07!110;UBERON:0001986!3.03e-07!18;UBERON:0004638!3.03e-07!18;UBERON:0004852!3.03e-07!18;UBERON:0001009!3.91e-07!113;UBERON:0001893!9.96e-07!34 | |ontology_enrichment_uberon=UBERON:0000178!1.19e-21!15;UBERON:0000179!1.19e-21!15;UBERON:0000463!1.19e-21!15;UBERON:0007023!4.78e-12!115;UBERON:0001638!2.39e-09!9;UBERON:0003920!2.39e-09!9;UBERON:0004582!2.39e-09!9;UBERON:0002780!2.53e-08!41;UBERON:0001890!2.53e-08!41;UBERON:0006240!2.53e-08!41;UBERON:0003080!4.79e-08!42;UBERON:0004535!1.67e-07!110;UBERON:0001986!3.03e-07!18;UBERON:0004638!3.03e-07!18;UBERON:0004852!3.03e-07!18;UBERON:0001009!3.91e-07!113;UBERON:0001893!9.96e-07!34 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;3.63e-53;15!UBERON:0000179;3.63e-53;15!UBERON:0000463;3.63e-53;15!UBERON:0002390;2.05e-22;32!UBERON:0001638;9.05e-22;9!UBERON:0003920;9.05e-22;9!UBERON:0004582;9.05e-22;9!UBERON:0004638;2.77e-15;18!UBERON:0001986;2.77e-15;18!UBERON:0004852;2.77e-15;18!UBERON:0002193;9.53e-15;42!UBERON:0000487;2.00e-12;22!UBERON:0006914;7.01e-11;25!UBERON:0001009;2.03e-09;112!UBERON:0004535;1.05e-08;109!UBERON:0002066;3.79e-07;5!UBERON:0000490;9.99e-07;33 | |ontology_enrichment_uberon_v019=UBERON:0000178;3.63e-53;15!UBERON:0000179;3.63e-53;15!UBERON:0000463;3.63e-53;15!UBERON:0002390;2.05e-22;32!UBERON:0001638;9.05e-22;9!UBERON:0003920;9.05e-22;9!UBERON:0004582;9.05e-22;9!UBERON:0004638;2.77e-15;18!UBERON:0001986;2.77e-15;18!UBERON:0004852;2.77e-15;18!UBERON:0002193;9.53e-15;42!UBERON:0000487;2.00e-12;22!UBERON:0006914;7.01e-11;25!UBERON:0001009;2.03e-09;112!UBERON:0004535;1.05e-08;109!UBERON:0002066;3.79e-07;5!UBERON:0000490;9.99e-07;33 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,3.95e-53,15;UBERON:0000179,3.95e-53,15;UBERON:0000463,3.95e-53,15;UBERON:0001638,6.66e-22,9;UBERON:0003920,6.66e-22,9;UBERON:0004582,6.66e-22,9;UBERON:0004535,8.76e-21,109;UBERON:0001009,3.85e-20,112;UBERON:0004638,2.60e-15,18;UBERON:0001986,2.60e-15,18;UBERON:0004852,2.60e-15,18;UBERON:0000487,1.90e-12,22;UBERON:0006914,6.70e-11,25;UBERON:0003081,6.76e-11,203;UBERON:0002193,3.08e-07,108;UBERON:0002066,3.34e-07,5 | |||
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| ||
|short_description=p12@ATP9A | |short_description=p12@ATP9A | ||
}} | }} |
Latest revision as of 23:32, 16 September 2015
Short description: | p12@ATP9A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_12_at_ATP9A_5end |
Coexpression cluster: | C14_Whole_blood_Reticulocytes_liver_Neutrophils_Eosinophils_spleen |
Association with transcript: | 10bp_to_AK025559_5end |
EntrezGene: | ATP9A |
HGNC: | 13540 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vein endothelial cell | 7.35e-33 | 6 |
endothelial cell | 2.97e-20 | 36 |
granulocyte | 4.71e-16 | 8 |
meso-epithelial cell | 6.79e-16 | 45 |
endothelial cell of vascular tree | 2.52e-15 | 24 |
blood vessel endothelial cell | 2.60e-15 | 18 |
embryonic blood vessel endothelial progenitor cell | 2.60e-15 | 18 |
lining cell | 5.53e-12 | 58 |
barrier cell | 5.53e-12 | 58 |
blood cell | 9.83e-12 | 11 |
basophil | 1.77e-11 | 3 |
endothelial cell of umbilical vein | 1.97e-11 | 3 |
glomerular endothelial cell | 3.45e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
blood | 3.95e-53 | 15 |
haemolymphatic fluid | 3.95e-53 | 15 |
organism substance | 3.95e-53 | 15 |
vein | 6.66e-22 | 9 |
venous blood vessel | 6.66e-22 | 9 |
venous system | 6.66e-22 | 9 |
cardiovascular system | 8.76e-21 | 109 |
circulatory system | 3.85e-20 | 112 |
blood vessel endothelium | 2.60e-15 | 18 |
endothelium | 2.60e-15 | 18 |
cardiovascular system endothelium | 2.60e-15 | 18 |
simple squamous epithelium | 1.90e-12 | 22 |
squamous epithelium | 6.70e-11 | 25 |
lateral plate mesoderm | 6.76e-11 | 203 |
hemolymphoid system | 3.08e-07 | 108 |
umbilical vein | 3.34e-07 | 5 |