FFCP PHASE1:Hg19::chr12:124155737..124155748,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=79867 | |EntrezGene=79867 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25774 | |HGNC=25774 | ||
|TSSclassifier=strong | |||
|UniProt=Q96GX1,A8K7Y8,F5H6G0 | |UniProt=Q96GX1,A8K7Y8,F5H6G0 | ||
|association_with_transcript=77bp_to_ENST00000303372,ENST00000426174,ENST00000541523,NM_001143850,NM_024809,uc001ufp.2,uc009zya.2_5end | |association_with_transcript=77bp_to_ENST00000303372,ENST00000426174,ENST00000541523,NM_001143850,NM_024809,uc001ufp.2,uc009zya.2_5end | ||
|cluster_id=chr12:124155737..124155748,+ | |||
|description=CAGE_peak_3_at_TCTN2_5end | |description=CAGE_peak_3_at_TCTN2_5end | ||
|id=chr12:124155737..124155748,+ | |id=chr12:124155737..124155748,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002567;3.58e-25;3!CL:0000511;2.71e-19;1!CL:0002625;2.71e-19;1!CL:0000228;2.71e-19;1!CL:0002566;2.71e-19;1!CL:0000216;2.71e-19;1!CL:0002372;2.71e-19;1!CL:0000148;6.02e-17;10!CL:0000147;2.68e-12;14!CL:0000710;8.63e-09;20!CL:0000135;2.63e-07;3!CL:0000388;2.63e-07;3 | |ontology_enrichment_celltype_v019=CL:0002567;3.58e-25;3!CL:0000511;2.71e-19;1!CL:0002625;2.71e-19;1!CL:0000228;2.71e-19;1!CL:0002566;2.71e-19;1!CL:0000216;2.71e-19;1!CL:0002372;2.71e-19;1!CL:0000148;6.02e-17;10!CL:0000147;2.68e-12;14!CL:0000710;8.63e-09;20!CL:0000135;2.63e-07;3!CL:0000388;2.63e-07;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0002567,3.82e-25,3;CL:0002566,1.30e-19,1;CL:0000511,1.56e-19,1;CL:0002625,1.56e-19,1;CL:0000216,1.56e-19,1;CL:0000228,2.25e-19,1;CL:0002372,2.25e-19,1;CL:0000148,4.98e-17,10;CL:0000541,4.98e-17,10;CL:0000147,2.34e-12,14;CL:0000710,7.87e-09,20;CL:0000135,2.32e-07,3;CL:0000388,2.32e-07,3 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0001136;2.71e-19;1!UBERON:0001343;2.71e-19;1!UBERON:0004910;2.71e-19;1!UBERON:0004813;2.71e-19;1!UBERON:0004909;2.48e-10;2!UBERON:0007846;2.63e-07;3!UBERON:0000043;2.63e-07;3!UBERON:0007845;2.63e-07;3 | |ontology_enrichment_uberon_v019=UBERON:0001136;2.71e-19;1!UBERON:0001343;2.71e-19;1!UBERON:0004910;2.71e-19;1!UBERON:0004813;2.71e-19;1!UBERON:0004909;2.48e-10;2!UBERON:0007846;2.63e-07;3!UBERON:0000043;2.63e-07;3!UBERON:0007845;2.63e-07;3 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001136,1.56e-19,1;UBERON:0001343,1.56e-19,1;UBERON:0004910,1.56e-19,1;UBERON:0005154,1.56e-19,1;UBERON:0005295,1.56e-19,1;UBERON:0004813,1.56e-19,1;UBERON:0005297,1.56e-19,1;UBERON:0005294,1.56e-19,1;UBERON:0010141,1.56e-19,1;UBERON:0005891,1.56e-19,1;UBERON:0004909,1.89e-10,2;UBERON:0004871,5.80e-10,8;UBERON:0007846,2.32e-07,3;UBERON:0000043,2.32e-07,3;UBERON:0007845,2.32e-07,3 | |||
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| ||
|short_description=p3@TCTN2 | |short_description=p3@TCTN2 | ||
}} | }} |
Latest revision as of 02:47, 17 September 2015
Short description: | p3@TCTN2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_TCTN2_5end |
Coexpression cluster: | NA |
Association with transcript: | 77bp_to_ENST00000303372, ENST00000426174, ENST00000541523, NM_001143850, NM_024809, uc001ufp.2, uc009zya.2_5end |
EntrezGene: | TCTN2 |
HGNC: | 25774 |
UniProt: | Q96GX1A8K7Y8F5H6G0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
light melanocyte | 3.82e-25 | 3 |
dark melanocyte | 1.30e-19 | 1 |
androgen binding protein secreting cell | 1.56e-19 | 1 |
seminiferous tubule epithelial cell | 1.56e-19 | 1 |
Sertoli cell | 1.56e-19 | 1 |
multinucleate cell | 2.25e-19 | 1 |
myotube | 2.25e-19 | 1 |
melanocyte | 4.98e-17 | 10 |
melanoblast | 4.98e-17 | 10 |
pigment cell | 2.34e-12 | 14 |
neurecto-epithelial cell | 7.87e-09 | 20 |
fibrocyte | 2.32e-07 | 3 |
tendon cell | 2.32e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
mesothelium | 1.56e-19 | 1 |
seminiferous tubule of testis | 1.56e-19 | 1 |
epithelium of male gonad | 1.56e-19 | 1 |
epithelial cord | 1.56e-19 | 1 |
sex cord | 1.56e-19 | 1 |
seminiferous tubule epithelium | 1.56e-19 | 1 |
testis sex cord | 1.56e-19 | 1 |
genital ridge | 1.56e-19 | 1 |
primitive sex cord of indifferent gonad | 1.56e-19 | 1 |
coelomic epithelium | 1.56e-19 | 1 |
epithelium of gonad | 1.89e-10 | 2 |
somatic layer of lateral plate mesoderm | 5.80e-10 | 8 |
dense regular connective tissue | 2.32e-07 | 3 |
tendon | 2.32e-07 | 3 |
regular connective tissue | 2.32e-07 | 3 |