FFCP PHASE1:Hg19::chr22:45958896..45958922,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr22:45958896..45958922,+ | |||
|coexpression_cluster_id=C518 | |coexpression_cluster_id=C518 | ||
|description=CAGE_peak_at_chr22:45958896..45958922,+ | |description=CAGE_peak_at_chr22:45958896..45958922,+ | ||
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|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002561;2.33e-17;2!CL:0002622;6.53e-12;3!CL:0002521;1.43e-11;3!CL:0000214;1.43e-11;3!CL:0002581;1.02e-09;1!CL:0000153;1.63e-08;9!CL:0000447;1.63e-08;9!CL:0002559;1.79e-07;5!CL:0000499;4.94e-07;28 | |ontology_enrichment_celltype_v019=CL:0002561;2.33e-17;2!CL:0002622;6.53e-12;3!CL:0002521;1.43e-11;3!CL:0000214;1.43e-11;3!CL:0002581;1.02e-09;1!CL:0000153;1.63e-08;9!CL:0000447;1.63e-08;9!CL:0002559;1.79e-07;5!CL:0000499;4.94e-07;28 | ||
|ontology_enrichment_celltype_v019_2=CL:0002561,1.37e-17,2;CL:0002622,4.35e-12,3;CL:0000214,7.92e-12,3;CL:0002521,1.16e-11,3;CL:0002581,9.44e-10,1;CL:0000153,1.42e-08,9;CL:0000447,1.42e-08,9;CL:0002559,1.46e-07,5;CL:0000499,4.16e-07,28 | |||
|ontology_enrichment_development_v019=UBERON:0003124;2.65e-09;1 | |ontology_enrichment_development_v019=UBERON:0003124;2.65e-09;1 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001737!1.07e-10!9;UBERON:0001046!1.28e-07!19;UBERON:0000162!6.85e-07!14;UBERON:0001353!6.85e-07!14;UBERON:0000163!6.85e-07!14;UBERON:0006866!6.85e-07!14;UBERON:0000164!6.85e-07!14;UBERON:0000931!6.85e-07!14 | |ontology_enrichment_uberon=UBERON:0001737!1.07e-10!9;UBERON:0001046!1.28e-07!19;UBERON:0000162!6.85e-07!14;UBERON:0001353!6.85e-07!14;UBERON:0000163!6.85e-07!14;UBERON:0006866!6.85e-07!14;UBERON:0000164!6.85e-07!14;UBERON:0000931!6.85e-07!14 | ||
|ontology_enrichment_uberon_v019=UBERON:0005933;2.33e-17;2!UBERON:0005942;2.33e-17;2!UBERON:0005932;2.33e-17;2!UBERON:0006915;1.43e-11;3!UBERON:0007616;1.43e-11;3!UBERON:0002217;1.43e-11;3!UBERON:0002018;1.43e-11;3!UBERON:0002190;1.43e-11;3!UBERON:0000077;3.03e-10;27!UBERON:0000996;2.65e-09;1!UBERON:0001987;6.72e-09;4!UBERON:0004457;1.63e-08;9!UBERON:0000042;1.63e-08;9!UBERON:0002073;1.79e-07;5!UBERON:0002072;2.76e-07;5!UBERON:0002367;3.50e-07;11!UBERON:0010147;3.50e-07;11 | |ontology_enrichment_uberon_v019=UBERON:0005933;2.33e-17;2!UBERON:0005942;2.33e-17;2!UBERON:0005932;2.33e-17;2!UBERON:0006915;1.43e-11;3!UBERON:0007616;1.43e-11;3!UBERON:0002217;1.43e-11;3!UBERON:0002018;1.43e-11;3!UBERON:0002190;1.43e-11;3!UBERON:0000077;3.03e-10;27!UBERON:0000996;2.65e-09;1!UBERON:0001987;6.72e-09;4!UBERON:0004457;1.63e-08;9!UBERON:0000042;1.63e-08;9!UBERON:0002073;1.79e-07;5!UBERON:0002072;2.76e-07;5!UBERON:0002367;3.50e-07;11!UBERON:0010147;3.50e-07;11 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0005933,1.37e-17,2;UBERON:0005942,1.37e-17,2;UBERON:0005932,1.37e-17,2;UBERON:0006915,7.92e-12,3;UBERON:0007616,7.92e-12,3;UBERON:0002217,7.92e-12,3;UBERON:0002018,7.92e-12,3;UBERON:0002190,1.16e-11,3;UBERON:0000077,1.19e-09,29;UBERON:0000162,1.63e-09,14;UBERON:0001353,1.63e-09,14;UBERON:0000163,1.63e-09,14;UBERON:0006866,1.63e-09,14;UBERON:0000164,1.63e-09,14;UBERON:0000931,1.63e-09,14;UBERON:0000996,1.69e-09,1;UBERON:0001987,3.99e-09,4;UBERON:0004340,3.99e-09,4;UBERON:0004122,6.87e-09,15;UBERON:0002073,1.46e-07,5;UBERON:0005086,1.46e-07,5;UBERON:0002072,2.43e-07,5;UBERON:0002367,3.29e-07,11;UBERON:0010147,3.29e-07,11;UBERON:0009846,3.29e-07,11;UBERON:0003353,3.29e-07,11;UBERON:0004902,3.29e-07,11;UBERON:0003820,3.29e-07,11;UBERON:0009847,3.29e-07,11;UBERON:0001046,4.85e-07,19 | |||
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| ||
|short_description=p@chr22:45958896..45958922,+ | |short_description=p@chr22:45958896..45958922,+ | ||
}} | }} |
Latest revision as of 22:05, 28 July 2015
Short description: | p@chr22:45958896..45958922, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr22:45958896..45958922, + |
Coexpression cluster: | C518_sacrococcigeal_Prostate_Mesenchymal_Fibroblast_tridermal_Hair_placenta |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
outer root sheath cell | 1.37e-17 | 2 |
prostate stromal cell | 4.35e-12 | 3 |
synovial cell | 7.92e-12 | 3 |
subcutaneous fat cell | 1.16e-11 | 3 |
perirenal preadipocyte | 9.44e-10 | 1 |
GAG secreting cell | 1.42e-08 | 9 |
carbohydrate secreting cell | 1.42e-08 | 9 |
hair follicle cell | 1.46e-07 | 5 |
stromal cell | 4.16e-07 | 28 |
Ontology term | p-value | n |
---|---|---|
hair root sheath | 1.37e-17 | 2 |
hair outer root sheath | 1.37e-17 | 2 |
bulb of hair follicle | 1.37e-17 | 2 |
stratified squamous epithelium | 7.92e-12 | 3 |
layer of synovial tissue | 7.92e-12 | 3 |
synovial joint | 7.92e-12 | 3 |
synovial membrane of synovial joint | 7.92e-12 | 3 |
subcutaneous adipose tissue | 1.16e-11 | 3 |
mixed endoderm/mesoderm-derived structure | 1.19e-09 | 29 |
cloaca | 1.63e-09 | 14 |
anal region | 1.63e-09 | 14 |
embryonic cloaca | 1.63e-09 | 14 |
terminal part of digestive tract | 1.63e-09 | 14 |
primitive urogenital sinus | 1.63e-09 | 14 |
proctodeum | 1.63e-09 | 14 |
vagina | 1.69e-09 | 1 |
placenta | 3.99e-09 | 4 |
allantois | 3.99e-09 | 4 |
genitourinary system | 6.87e-09 | 15 |
hair follicle | 1.46e-07 | 5 |
hair follicle placode | 1.46e-07 | 5 |
hypodermis | 2.43e-07 | 5 |
prostate gland | 3.29e-07 | 11 |
male accessory sex gland | 3.29e-07 | 11 |
embryonic cloacal epithelium | 3.29e-07 | 11 |
epithelium of hindgut | 3.29e-07 | 11 |
urogenital sinus epithelium | 3.29e-07 | 11 |
prostate bud | 3.29e-07 | 11 |
prostate field | 3.29e-07 | 11 |
hindgut | 4.85e-07 | 19 |