FFCP PHASE1:Hg19::chr15:85427879..85427899,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9154 | |EntrezGene=9154 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11001 | |HGNC=11001 | ||
|TSSclassifier=strong | |||
|UniProt=B7Z533,F5H560,B7Z3L6 | |UniProt=B7Z533,F5H560,B7Z3L6 | ||
|association_with_transcript=0bp_to_ENST00000338602,ENST00000537216,ENST00000537624,ENST00000538177_5end | |association_with_transcript=0bp_to_ENST00000338602,ENST00000537216,ENST00000537624,ENST00000538177_5end | ||
|cluster_id=chr15:85427879..85427899,+ | |||
|coexpression_cluster_id=C5 | |coexpression_cluster_id=C5 | ||
|description=CAGE_peak_1_at_SLC28A1_5end | |description=CAGE_peak_1_at_SLC28A1_5end | ||
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|ontology_enrichment_celltype=CL:0000181!1.87e-19!12;CL:0000417!1.87e-19!12;CL:0000668!1.87e-19!12;CL:0000414!1.87e-19!12;CL:0000412!1.87e-19!12;CL:0000182!1.87e-19!12 | |ontology_enrichment_celltype=CL:0000181!1.87e-19!12;CL:0000417!1.87e-19!12;CL:0000668!1.87e-19!12;CL:0000414!1.87e-19!12;CL:0000412!1.87e-19!12;CL:0000182!1.87e-19!12 | ||
|ontology_enrichment_celltype_v019=CL:0000182;5.60e-22;12 | |ontology_enrichment_celltype_v019=CL:0000182;5.60e-22;12 | ||
|ontology_enrichment_celltype_v019_2=CL:0000182,5.60e-22,12 | |||
|ontology_enrichment_development_v019=UBERON:0003104;5.26e-16;31!UBERON:0004161;2.36e-15;11!UBERON:0009497;4.94e-13;13!UBERON:0003918;4.05e-10;10!UBERON:0007687;4.05e-10;10 | |ontology_enrichment_development_v019=UBERON:0003104;5.26e-16;31!UBERON:0004161;2.36e-15;11!UBERON:0009497;4.94e-13;13!UBERON:0003918;4.05e-10;10!UBERON:0007687;4.05e-10;10 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!2.79e-21!19;UBERON:0006925!2.79e-21!19;UBERON:0008836!2.79e-21!19;UBERON:0008835!3.19e-18!22;UBERON:0003894!3.19e-18!22;UBERON:0009854!2.22e-17!23;UBERON:0007499!6.75e-16!25;UBERON:0009497!6.75e-16!25;UBERON:0000015!6.75e-16!25;UBERON:0002423!6.75e-16!25;UBERON:0006235!6.75e-16!25;UBERON:0004161!6.75e-16!25;UBERON:0005057!3.06e-15!26;UBERON:0009856!3.06e-15!26;UBERON:0005172!4.60e-15!55;UBERON:0005173!4.60e-15!55;UBERON:0002417!2.34e-13!61;UBERON:0000916!2.34e-13!61;UBERON:0002365!1.36e-12!31;UBERON:0002330!1.36e-12!31;UBERON:0002368!5.08e-11!35;UBERON:0000949!2.60e-08!45;UBERON:0002079!1.04e-07!1;UBERON:0001301!1.11e-07!1;UBERON:0002146!1.35e-07!1;UBERON:0005623!1.35e-07!1;UBERON:0007190!1.87e-07!1;UBERON:0007023!6.21e-07!115;UBERON:0003914!8.41e-07!118;UBERON:0003929!9.84e-07!54 | |ontology_enrichment_uberon=UBERON:0002107!2.79e-21!19;UBERON:0006925!2.79e-21!19;UBERON:0008836!2.79e-21!19;UBERON:0008835!3.19e-18!22;UBERON:0003894!3.19e-18!22;UBERON:0009854!2.22e-17!23;UBERON:0007499!6.75e-16!25;UBERON:0009497!6.75e-16!25;UBERON:0000015!6.75e-16!25;UBERON:0002423!6.75e-16!25;UBERON:0006235!6.75e-16!25;UBERON:0004161!6.75e-16!25;UBERON:0005057!3.06e-15!26;UBERON:0009856!3.06e-15!26;UBERON:0005172!4.60e-15!55;UBERON:0005173!4.60e-15!55;UBERON:0002417!2.34e-13!61;UBERON:0000916!2.34e-13!61;UBERON:0002365!1.36e-12!31;UBERON:0002330!1.36e-12!31;UBERON:0002368!5.08e-11!35;UBERON:0000949!2.60e-08!45;UBERON:0002079!1.04e-07!1;UBERON:0001301!1.11e-07!1;UBERON:0002146!1.35e-07!1;UBERON:0005623!1.35e-07!1;UBERON:0007190!1.87e-07!1;UBERON:0007023!6.21e-07!115;UBERON:0003914!8.41e-07!118;UBERON:0003929!9.84e-07!54 | ||
|ontology_enrichment_uberon_v019=UBERON:0002107;1.36e-26;19!UBERON:0006925;1.36e-26;19!UBERON:0002423;4.50e-20;25!UBERON:0002108;2.47e-19;4!UBERON:0002365;3.35e-16;31!UBERON:0002330;3.35e-16;31!UBERON:0002368;2.46e-13;33!UBERON:0005172;6.69e-13;52!UBERON:0005173;6.69e-13;52!UBERON:0000949;1.88e-10;43!UBERON:0002417;7.66e-10;58!UBERON:0000916;7.66e-10;58!UBERON:0000160;1.77e-09;17!UBERON:0001007;6.69e-08;81!UBERON:0005409;1.86e-07;22 | |ontology_enrichment_uberon_v019=UBERON:0002107;1.36e-26;19!UBERON:0006925;1.36e-26;19!UBERON:0002423;4.50e-20;25!UBERON:0002108;2.47e-19;4!UBERON:0002365;3.35e-16;31!UBERON:0002330;3.35e-16;31!UBERON:0002368;2.46e-13;33!UBERON:0005172;6.69e-13;52!UBERON:0005173;6.69e-13;52!UBERON:0000949;1.88e-10;43!UBERON:0002417;7.66e-10;58!UBERON:0000916;7.66e-10;58!UBERON:0000160;1.77e-09;17!UBERON:0001007;6.69e-08;81!UBERON:0005409;1.86e-07;22 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,1.36e-26,19;UBERON:0006925,1.36e-26,19;UBERON:0008836,1.36e-26,19;UBERON:0008835,6.87e-23,22;UBERON:0003894,6.87e-23,22;UBERON:0009854,7.19e-22,23;UBERON:0007499,4.50e-20,25;UBERON:0009497,4.50e-20,25;UBERON:0000015,4.50e-20,25;UBERON:0002423,4.50e-20,25;UBERON:0006235,4.50e-20,25;UBERON:0004161,4.50e-20,25;UBERON:0002108,2.47e-19,4;UBERON:0009856,2.81e-19,26;UBERON:0005172,3.44e-18,54;UBERON:0005173,3.44e-18,54;UBERON:0002417,3.09e-16,60;UBERON:0000916,3.09e-16,60;UBERON:0002365,4.53e-16,31;UBERON:0002330,4.53e-16,31;UBERON:0002368,3.68e-14,35;UBERON:0000949,7.23e-11,45;UBERON:0000160,1.75e-09,17;UBERON:0004921,4.29e-09,118;UBERON:0005177,4.40e-09,101;UBERON:0003929,6.09e-09,54;UBERON:0002530,3.99e-08,59;UBERON:0009569,4.73e-08,112;UBERON:0001007,4.11e-07,145;UBERON:0001555,4.11e-07,145;UBERON:0007026,4.11e-07,145 | |||
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|short_description=p1@SLC28A1 | |short_description=p1@SLC28A1 | ||
}} | }} |
Latest revision as of 13:15, 19 September 2015
Short description: | p1@SLC28A1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SLC28A1_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | 0bp_to_ENST00000338602, ENST00000537216, ENST00000537624, ENST00000538177_5end |
EntrezGene: | SLC28A1 |
HGNC: | 11001 |
UniProt: | B7Z533F5H560B7Z3L6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 5.60e-22 | 12 |
Ontology term | p-value | n |
---|---|---|
liver | 1.36e-26 | 19 |
digestive gland | 1.36e-26 | 19 |
liver bud | 1.36e-26 | 19 |
hepatic diverticulum | 6.87e-23 | 22 |
liver primordium | 6.87e-23 | 22 |
digestive tract diverticulum | 7.19e-22 | 23 |
epithelial sac | 4.50e-20 | 25 |
epithelium of foregut-midgut junction | 4.50e-20 | 25 |
anatomical boundary | 4.50e-20 | 25 |
hepatobiliary system | 4.50e-20 | 25 |
foregut-midgut junction | 4.50e-20 | 25 |
septum transversum | 4.50e-20 | 25 |
small intestine | 2.47e-19 | 4 |
sac | 2.81e-19 | 26 |
abdomen element | 3.44e-18 | 54 |
abdominal segment element | 3.44e-18 | 54 |
abdominal segment of trunk | 3.09e-16 | 60 |
abdomen | 3.09e-16 | 60 |
exocrine gland | 4.53e-16 | 31 |
exocrine system | 4.53e-16 | 31 |
endocrine gland | 3.68e-14 | 35 |
endocrine system | 7.23e-11 | 45 |
intestine | 1.75e-09 | 17 |
subdivision of digestive tract | 4.29e-09 | 118 |
trunk region element | 4.40e-09 | 101 |
gut epithelium | 6.09e-09 | 54 |
gland | 3.99e-08 | 59 |
subdivision of trunk | 4.73e-08 | 112 |
digestive system | 4.11e-07 | 145 |
digestive tract | 4.11e-07 | 145 |
primitive gut | 4.11e-07 | 145 |