FFCP PHASE1:Hg19::chr1:6157343..6157357,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr1:6157343..6157357,+
|short_description=p@chr1:6157343..6157357,+
|description=CAGE_peak_at_chr1:6157343..6157357,+
|association_with_transcript=NA
|EntrezG...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr1:6157343..6157357,+ | |||
|description=CAGE_peak_at_chr1:6157343..6157357,+ | |||
|id=chr1:6157343..6157357,+ | |||
|ontology_enrichment_celltype=CL:0002087!1.79e-25!119;CL:0000037!4.21e-23!172;CL:0000566!4.21e-23!172;CL:0000738!7.33e-23!140;CL:0002031!1.65e-22!124;CL:0002032!1.02e-21!165;CL:0000837!1.02e-21!165;CL:0002194!3.52e-21!63;CL:0000576!3.52e-21!63;CL:0000040!3.52e-21!63;CL:0000559!3.52e-21!63;CL:0000988!4.94e-21!182;CL:0000839!7.09e-21!70;CL:0000766!1.38e-20!76;CL:0000557!2.28e-20!71;CL:0002009!4.36e-20!65;CL:0000763!4.97e-17!112;CL:0000049!4.97e-17!112;CL:0000860!8.30e-14!45;CL:0002057!2.29e-13!42 | |||
|ontology_enrichment_celltype_v019=CL:0002567;4.84e-27;3!CL:0000148;8.03e-22;10!CL:0000147;1.45e-15;14!CL:0000235;5.87e-14;6!CL:0000710;7.40e-11;20!CL:0000473;6.41e-10;39!CL:0000234;6.41e-10;39!CL:0000075;5.36e-08;27 | |||
|ontology_enrichment_celltype_v019_2=CL:0002567,6.05e-27,3;CL:0000148,6.62e-22,10;CL:0000541,6.62e-22,10;CL:0000147,1.26e-15,14;CL:0000235,7.00e-14,6;CL:0000710,6.74e-11,20;CL:0000473,1.76e-10,48;CL:0000234,1.76e-10,48;CL:0000766,2.71e-08,72;CL:0002194,3.50e-08,59;CL:0000576,3.50e-08,59;CL:0000040,3.50e-08,59;CL:0000559,3.50e-08,59;CL:0000075,5.00e-08,27;CL:0002009,6.94e-08,61;CL:0000839,3.20e-07,66;CL:0000557,4.23e-07,67 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!2.08e-19!102;UBERON:0003061!2.08e-19!102;UBERON:0002371!2.61e-18!80;UBERON:0002193!5.26e-17!112;UBERON:0001474!5.64e-16!86;UBERON:0004765!8.43e-14!101;UBERON:0001434!8.43e-14!101;UBERON:0002405!4.24e-12!115;UBERON:0002619!8.12e-08!22;UBERON:0001950!9.72e-08!20;UBERON:0002020!1.55e-07!34;UBERON:0003528!1.55e-07!34;UBERON:0001893!2.01e-07!34;UBERON:0001869!2.20e-07!32;UBERON:0002791!5.23e-07!33 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p@chr1:6157343..6157357,+ | |||
}} | }} |
Latest revision as of 09:30, 28 July 2015
Short description: | p@chr1:6157343..6157357, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:6157343..6157357, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
light melanocyte | 6.05e-27 | 3 |
melanocyte | 6.62e-22 | 10 |
melanoblast | 6.62e-22 | 10 |
pigment cell | 1.26e-15 | 14 |
macrophage | 7.00e-14 | 6 |
neurecto-epithelial cell | 6.74e-11 | 20 |
defensive cell | 1.76e-10 | 48 |
phagocyte | 1.76e-10 | 48 |
myeloid leukocyte | 2.71e-08 | 72 |
monopoietic cell | 3.50e-08 | 59 |
monocyte | 3.50e-08 | 59 |
monoblast | 3.50e-08 | 59 |
promonocyte | 3.50e-08 | 59 |
columnar/cuboidal epithelial cell | 5.00e-08 | 27 |
macrophage dendritic cell progenitor | 6.94e-08 | 61 |
myeloid lineage restricted progenitor cell | 3.20e-07 | 66 |
granulocyte monocyte progenitor cell | 4.23e-07 | 67 |