FFCP PHASE1:Hg19::chr9:32445457..32445459,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr9:32445457..32445459,- | |||
|coexpression_cluster_id=C174 | |coexpression_cluster_id=C174 | ||
|description=CAGE_peak_at_chr9:32445457..32445459,- | |description=CAGE_peak_at_chr9:32445457..32445459,- | ||
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|ontology_enrichment_celltype=CL:0002057!7.62e-10!42;CL:0000860!4.38e-09!45 | |ontology_enrichment_celltype=CL:0002057!7.62e-10!42;CL:0000860!4.38e-09!45 | ||
|ontology_enrichment_celltype_v019=CL:0000860;7.82e-13;33!CL:0002057;7.82e-13;33!CL:0000473;3.19e-11;39!CL:0000234;3.19e-11;39!CL:0000576;9.79e-10;48 | |ontology_enrichment_celltype_v019=CL:0000860;7.82e-13;33!CL:0002057;7.82e-13;33!CL:0000473;3.19e-11;39!CL:0000234;3.19e-11;39!CL:0000576;9.79e-10;48 | ||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.67e-11,42;CL:0002057,1.67e-11,42;CL:0000473,3.53e-10,48;CL:0000234,3.53e-10,48;CL:0002194,2.58e-08,59;CL:0000576,2.58e-08,59;CL:0000040,2.58e-08,59;CL:0000559,2.58e-08,59;CL:0002009,4.50e-08,61;CL:0000839,1.56e-07,66;CL:0000557,1.96e-07,67;CL:0000766,5.59e-07,72 | |||
|ontology_enrichment_development_v019=CL:0002057;3.21e-11;42 | |ontology_enrichment_development_v019=CL:0002057;3.21e-11;42 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002038!8.49e-07!1;UBERON:0009661!8.49e-07!1 | |ontology_enrichment_uberon=UBERON:0002038!8.49e-07!1;UBERON:0009661!8.49e-07!1 | ||
|ontology_enrichment_uberon_v019=UBERON:0001876;7.14e-26;2!UBERON:0000349;3.26e-11;5!UBERON:0001871;2.18e-08;6!UBERON:0002420;8.37e-07;9!UBERON:0007245;8.37e-07;9!UBERON:0010009;8.37e-07;9!UBERON:0010011;8.37e-07;9!UBERON:0000454;8.37e-07;9 | |ontology_enrichment_uberon_v019=UBERON:0001876;7.14e-26;2!UBERON:0000349;3.26e-11;5!UBERON:0001871;2.18e-08;6!UBERON:0002420;8.37e-07;9!UBERON:0007245;8.37e-07;9!UBERON:0010009;8.37e-07;9!UBERON:0010011;8.37e-07;9!UBERON:0000454;8.37e-07;9 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001876,5.56e-26,2;UBERON:0000349,2.94e-11,5;UBERON:0001871,2.03e-08,6;UBERON:0002420,7.91e-07,9;UBERON:0007245,7.91e-07,9;UBERON:0010009,7.91e-07,9;UBERON:0010011,7.91e-07,9;UBERON:0000454,7.91e-07,9 | |||
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|short_description=p@chr9:32445457..32445459,- | |short_description=p@chr9:32445457..32445459,- | ||
}} | }} |
Latest revision as of 01:21, 1 August 2015
Short description: | p@chr9:32445457..32445459, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr9:32445457..32445459, - |
Coexpression cluster: | C174_CD14_Neutrophils_Smooth_mesothelioma_embryonic_Monocytederived_Eosinophils |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.67e-11 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.67e-11 | 42 |
defensive cell | 3.53e-10 | 48 |
phagocyte | 3.53e-10 | 48 |
monopoietic cell | 2.58e-08 | 59 |
monocyte | 2.58e-08 | 59 |
monoblast | 2.58e-08 | 59 |
promonocyte | 2.58e-08 | 59 |
macrophage dendritic cell progenitor | 4.50e-08 | 61 |
myeloid lineage restricted progenitor cell | 1.56e-07 | 66 |
granulocyte monocyte progenitor cell | 1.96e-07 | 67 |
myeloid leukocyte | 5.59e-07 | 72 |
Ontology term | p-value | n |
---|---|---|
amygdala | 5.56e-26 | 2 |
limbic system | 2.94e-11 | 5 |
temporal lobe | 2.03e-08 | 6 |
basal ganglion | 7.91e-07 | 9 |
nuclear complex of neuraxis | 7.91e-07 | 9 |
aggregate regional part of brain | 7.91e-07 | 9 |
collection of basal ganglia | 7.91e-07 | 9 |
cerebral subcortex | 7.91e-07 | 9 |