FFCP PHASE1:Hg19::chr11:2018977..2019048,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=283120 | |EntrezGene=283120 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=4713 | |HGNC=4713 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000411754,ENST00000412788,ENST00000422826,ENST00000431095,uc001lvd.2,uc001lve.2_5end | |association_with_transcript=0bp_to_ENST00000411754,ENST00000412788,ENST00000422826,ENST00000431095,uc001lvd.2,uc001lve.2_5end | ||
|cluster_id=chr11:2018977..2019048,- | |||
|coexpression_cluster_id=C227 | |coexpression_cluster_id=C227 | ||
|description=CAGE_peak_1_at_H19_5end | |description=CAGE_peak_1_at_H19_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000349;5.70e-11;19 | |ontology_enrichment_celltype_v019=CL:0000349;5.70e-11;19 | ||
|ontology_enrichment_celltype_v019_2=CL:0000349,5.76e-11,19 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004119!5.47e-11!169;UBERON:0000925!5.47e-11!169;UBERON:0006595!5.47e-11!169;UBERON:0003104!1.21e-10!238;UBERON:0009142!1.21e-10!238;UBERON:0000481!1.32e-10!347;UBERON:0004921!1.48e-09!129;UBERON:0004185!1.48e-09!129;UBERON:0004923!1.84e-09!57;UBERON:0005631!2.96e-09!14;UBERON:0000158!2.96e-09!14;UBERON:0000077!7.01e-09!130;UBERON:0001007!1.95e-08!155;UBERON:0001555!1.95e-08!155;UBERON:0007026!1.95e-08!155;UBERON:0001737!2.23e-08!9;UBERON:0001557!2.46e-08!19;UBERON:0000064!8.86e-08!219;UBERON:0003103!1.32e-07!69;UBERON:0001041!1.66e-07!98;UBERON:0003124!1.75e-07!7;UBERON:0000468!2.89e-07!659;UBERON:0000478!3.15e-07!24;UBERON:0000063!7.12e-07!97 | |ontology_enrichment_uberon=UBERON:0004119!5.47e-11!169;UBERON:0000925!5.47e-11!169;UBERON:0006595!5.47e-11!169;UBERON:0003104!1.21e-10!238;UBERON:0009142!1.21e-10!238;UBERON:0000481!1.32e-10!347;UBERON:0004921!1.48e-09!129;UBERON:0004185!1.48e-09!129;UBERON:0004923!1.84e-09!57;UBERON:0005631!2.96e-09!14;UBERON:0000158!2.96e-09!14;UBERON:0000077!7.01e-09!130;UBERON:0001007!1.95e-08!155;UBERON:0001555!1.95e-08!155;UBERON:0007026!1.95e-08!155;UBERON:0001737!2.23e-08!9;UBERON:0001557!2.46e-08!19;UBERON:0000064!8.86e-08!219;UBERON:0003103!1.32e-07!69;UBERON:0001041!1.66e-07!98;UBERON:0003124!1.75e-07!7;UBERON:0000468!2.89e-07!659;UBERON:0000478!3.15e-07!24;UBERON:0000063!7.12e-07!97 | ||
|ontology_enrichment_uberon_v019=UBERON:0001134;3.36e-13;16!UBERON:0002036;3.36e-13;16!UBERON:0001737;1.13e-10;9!UBERON:0001557;1.13e-10;9!UBERON:0000478;1.51e-10;24!UBERON:0005631;5.04e-08;10!UBERON:0000158;5.04e-08;10 | |ontology_enrichment_uberon_v019=UBERON:0001134;3.36e-13;16!UBERON:0002036;3.36e-13;16!UBERON:0001737;1.13e-10;9!UBERON:0001557;1.13e-10;9!UBERON:0000478;1.51e-10;24!UBERON:0005631;5.04e-08;10!UBERON:0000158;5.04e-08;10 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,2.35e-12,14;UBERON:0000158,2.35e-12,14;UBERON:0001737,1.13e-10,9;UBERON:0000478,1.52e-10,24;UBERON:0001557,1.55e-09,19;UBERON:0003124,1.77e-09,7;UBERON:0004119,1.35e-08,160;UBERON:0000925,1.35e-08,160;UBERON:0006595,1.35e-08,160;UBERON:0001041,1.40e-08,87;UBERON:0003104,1.43e-08,160;UBERON:0009142,1.43e-08,160;UBERON:0004921,1.91e-08,118;UBERON:0005256,1.51e-07,122;UBERON:0002100,2.37e-07,199 | |||
|phase1_expression=11.4457378940451,15.8434387679328,3.94672331468719,17.0124607200322,15.6436383049551,148.297549097063,0,0.631719873426831,0.783556884599516,9.09215565055583,14.653824527421,233.295385435024,235.807678536237,2.10402800032079,11.5989081504771,0,0,0,0,0.246242116153576,0.816002764977012,0.313454721478088,0,0,0.125542639594803,0,0,0,0,0,9.75341576891279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.42159801053347,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,2.68280343881454,3.45228916977532,0,1.00267582127178,1.59331170856906,1.5905718941022,22.3852040339212,0.567208902984407,0.665188192387692,0.351339142772504,0.916853528483988,0.728590576585084,4.07862887062872,0,0,0,0,0,0,0,0,0,0,0,0,0,0.516833518338658,0,0,0,0,0,0,0,0,0,0,0,0,0.183201743930407,0,0,3.48875241714027,0.496971951695318,0,0,0.573673241497627,0.354668382198357,21.3057488054077,0,0.24666754841716,9.95875313279252,0.269421344139376,1.30769522490767,11.04909221808,33.9943795443199,4.92075006850973,0,0,0.149448680551801,0.117434498643765,0,0.140450806702248,0,0.491337269247072,0,0,0,0.910161361938026,0,0,0.750711119231785,0,0,0,0,0.226864366320042,0.179389635688862,0,0,0,0,0,0,0,0.0974370051611986,0,0,2.10139873864455,0,0,0.169560592310488,0,0,0,0,0.265059536642971,7.90118811512725,4.14644220061482,1.7662459561294,0,0,0,0,0,0,75.006511225261,54.9586089654612,65.7960111581906,77.9778387218025,62.749279898613,53.6231599191078,105.842576905729,56.9042248863504,64.6375223669936,11.0723318193697,9.81692416624121,24.2828666685526,169.060018093373,1.26755034821831,0.982827216677626,20.0868568271677,0,0,0.343135620597051,0,0,0.201057944823262,28.9801833346198,1.62904152655162,0,0,2.08674728955138,0,0,0,0.190254152234598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224262168690721,0,0,0,3.57656445851882,0,0,0,0.257207374262142,0,0,3.71742783511184,973.463160072249,18.1112874091769,0,8.17401482107855,11.087326221068,0,0,0,0,0,0,0,0,0,27.0741043468373,41.9171698002782,41.9002653981356,0,0,0,0,0,0,1.54657762555539,0.167516265334349,0.637938751653163,0,0,0,15.9498939234882,6.00204625271613,4.6115054028955,0,0,0,0.117141414992713,4.21324539618807,2.27407504055985,26.9029985360513,0,1.47495334833363,0,217.92668825603,411.772108573027,0,0,0,444.08189216877,742.302060216817,454.19022058118,13.1497138143952,2.30192959932094,29.7499700099058,11.6606625822688,11.2575594794675,16.5679538777916,127.639537142692,0,0.177561725313127,0.0821271560138091,0,0,0,0,0,0,0.546273504020151,0.131124414959424,0.451199612907412,0,0,0,0,5.68666920354483,1.19065593693561,3.23873874153209,44.7259032801839,0.812839312631559,6.52196706011309,0,0,0,0,0,0,0.328014645699706,0.325378394664303,19.5777922130672,0.27470839445503,0.082509499920588,0,0.650060246036521,4.82051789532479,14.4039370255262,6.77813915304435,16.2713895209697,12.8188012410613,3.6522883255213,16.6769198001363,12.0169544656702,91.1688045022591,0.165284915360978,0.576570202095319,0.127612712494584,0.2023155617111,0,0,0,0,0,0,0,0,2.232950216158,8.22586504268687,2.2875623270859,1.27948895655667,56.9158854085114,0,0,0.539617372749944,0.823611089208164,0.235624804691373,0,0,0,9.26504104270222,0,0,0.272999822815972,0,0,0,0,0,1.73632660280006,9.83842128069949,0,0.30982349809975,0,1.72093622644862,16.6040879312175,0,0,0.633322905892992,1.97576935775941,2.27683904259429,4.54915136318478,0.0962221127255121,0.670302275535787,0,20.5233485693379,0.43050537267123,5.05414427002877,4.87773168890343,0,0,0,0,0,0,0,0,0,0.106824071127473,0,2.94048259177238,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.27429445378818,0,0,0,848.975387727226,412.780906357368,2282.20401659729,0,0,0,0,1.05562704063997,5.37969568277888,0.552567831062295,31.9954589774931,0,0,0,0,0,0,17.2625959864634,0,0,0,0,0,0,0,0.724999575434793,1.593108275997,0,17.2563007690594,1.72371686620732,0,0,0,0,0,0,0,0.219385397153973,0,0,6.46382171431895,0,1.38338342632836,117.941544754441,73.7715655350435,868.959159109749,47.1727606019591,2597.47846353881,0,0.156980256395025,0,0.676786981851542,2.15668787749514,0.671286347903371,0,0,0,0,0,0,1.99052386215701,1.06149077404007,9.16545217400438,0,0,0,0.067401132980677,303.374350678942,0,0,0.19566461893209,0,1.18375320854817,41.1368434565457,0.61214552326098,0.695052375913368,0,0,0,0,0.313932918407225,0,0,0,0,0.391969589657511,0,8.73633341210151,0,0.774050650312681,0.146178634172371,0.492692742319255,8.05008836853881,0.529536760149002,39.5466296365932,0,0,0,6.84429839571811,0,0.426905989478705,542.483090015484,0,0.114536596165916,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,3.0721064139948,0.458320848023367,7.89660327034495,7.58780201896166,18.027494021736,3.57074331906996,23.7157657878144,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.60058834087354,19.0410154930043,0,0,0,8.5763439164804,9.93137955548147,0.76280561296425,0,0,0,0,0,0,0.113312091520126,4.68967147769864,283.564742272154,0,0.13223260174269,0,0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| ||
|short_description=p1@H19 | |short_description=p1@H19 | ||
}} | }} |
Latest revision as of 06:58, 17 September 2015
Short description: | p1@H19 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_H19_5end |
Coexpression cluster: | C227_chorionic_amniotic_Mesenchymal_Placental_gastric_diaphragm_tongue |
Association with transcript: | 0bp_to_ENST00000411754, ENST00000412788, ENST00000422826, ENST00000431095, uc001lvd.2, uc001lve.2_5end |
EntrezGene: | H19 |
HGNC: | 4713 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 5.76e-11 | 19 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 2.35e-12 | 14 |
membranous layer | 2.35e-12 | 14 |
larynx | 1.13e-10 | 9 |
extraembryonic structure | 1.52e-10 | 24 |
upper respiratory tract | 1.55e-09 | 19 |
chorion | 1.77e-09 | 7 |
endoderm-derived structure | 1.35e-08 | 160 |
endoderm | 1.35e-08 | 160 |
presumptive endoderm | 1.35e-08 | 160 |
foregut | 1.40e-08 | 87 |
mesenchyme | 1.43e-08 | 160 |
entire embryonic mesenchyme | 1.43e-08 | 160 |
subdivision of digestive tract | 1.91e-08 | 118 |
trunk mesenchyme | 1.51e-07 | 122 |
trunk | 2.37e-07 | 199 |