FFCP PHASE1:Hg19::chr21:45627309..45627320,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-27bp_to_ENST00000423967_5end | |association_with_transcript=-27bp_to_ENST00000423967_5end | ||
|cluster_id=chr21:45627309..45627320,- | |||
|coexpression_cluster_id=C650 | |coexpression_cluster_id=C650 | ||
|description=CAGE_peak_1_at_ENST00000423967_5end | |description=CAGE_peak_1_at_ENST00000423967_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000945!2.29e-56!24;CL:0000826!2.29e-56!24;CL:0000542!2.31e-40!53;CL:0000051!2.31e-40!53;CL:0000838!6.41e-38!52;CL:0002087!8.54e-30!119;CL:0000738!9.83e-30!140;CL:0000236!5.50e-27!14;CL:0002031!2.06e-26!124;CL:0000037!3.76e-24!172;CL:0000566!3.76e-24!172;CL:0000988!2.43e-22!182;CL:0002032!2.89e-22!165;CL:0000837!2.89e-22!165;CL:0000784!5.57e-13!3;CL:0000785!6.73e-09!2;CL:0000955!6.73e-09!2;CL:0000818!6.73e-09!2;CL:0000954!6.73e-09!2;CL:0000816!6.73e-09!2;CL:0000134!9.75e-08!358;CL:0002320!2.00e-07!365 | |ontology_enrichment_celltype=CL:0000945!2.29e-56!24;CL:0000826!2.29e-56!24;CL:0000542!2.31e-40!53;CL:0000051!2.31e-40!53;CL:0000838!6.41e-38!52;CL:0002087!8.54e-30!119;CL:0000738!9.83e-30!140;CL:0000236!5.50e-27!14;CL:0002031!2.06e-26!124;CL:0000037!3.76e-24!172;CL:0000566!3.76e-24!172;CL:0000988!2.43e-22!182;CL:0002032!2.89e-22!165;CL:0000837!2.89e-22!165;CL:0000784!5.57e-13!3;CL:0000785!6.73e-09!2;CL:0000955!6.73e-09!2;CL:0000818!6.73e-09!2;CL:0000954!6.73e-09!2;CL:0000816!6.73e-09!2;CL:0000134!9.75e-08!358;CL:0002320!2.00e-07!365 | ||
|ontology_enrichment_celltype_v019=CL:0000945;6.69e-58;24!CL:0000784;7.49e-43;3!CL:0000236;1.04e-17;13!CL:0000946;5.98e-16;1!CL:0000786;5.98e-16;1!CL:0000542;2.22e-15;53!CL:0000451;3.31e-12;10!CL:0000771;2.07e-08;2 | |ontology_enrichment_celltype_v019=CL:0000945;6.69e-58;24!CL:0000784;7.49e-43;3!CL:0000236;1.04e-17;13!CL:0000946;5.98e-16;1!CL:0000786;5.98e-16;1!CL:0000542;2.22e-15;53!CL:0000451;3.31e-12;10!CL:0000771;2.07e-08;2 | ||
|ontology_enrichment_celltype_v019_2=CL:0000945,3.08e-58,24;CL:0000826,3.08e-58,24;CL:0000784,4.49e-42,3;CL:0000838,1.93e-26,52;CL:0000542,6.34e-26,53;CL:0000051,6.34e-26,53;CL:0000236,1.70e-25,14;CL:0000738,5.24e-19,136;CL:0000946,6.44e-16,1;CL:0000786,6.44e-16,1;CL:0000980,6.44e-16,1;CL:0000037,3.65e-15,168;CL:0000988,2.49e-14,177;CL:0002087,9.52e-14,115;CL:0002031,3.93e-13,120;CL:0000451,5.35e-12,10;CL:0002032,1.95e-11,161;CL:0000837,1.95e-11,161;CL:0000785,1.29e-08,2;CL:0000955,1.29e-08,2;CL:0000818,1.29e-08,2;CL:0000954,1.29e-08,2;CL:0000816,1.29e-08,2;CL:0000771,2.15e-08,2 | |||
|ontology_enrichment_development_v019=CL:0000051;2.22e-15;53!CL:0000954;1.24e-08;2 | |ontology_enrichment_development_v019=CL:0000051;2.22e-15;53!CL:0000954;1.24e-08;2 | ||
|ontology_enrichment_disease=DOID:0060058!7.77e-18!10 | |ontology_enrichment_disease=DOID:0060058!7.77e-18!10 | ||
|ontology_enrichment_disease_v019=DOID:630;5.98e-16;1!DOID:0050177;5.98e-16;1!DOID:0050427;5.98e-16;1 | |ontology_enrichment_disease_v019=DOID:630;5.98e-16;1!DOID:0050177;5.98e-16;1!DOID:0050427;5.98e-16;1 | ||
|ontology_enrichment_disease_v019_2=DOID:630,5.56e-16,1;DOID:0050177,5.56e-16,1;DOID:0050427,5.56e-16,1 | |||
|ontology_enrichment_uberon=UBERON:0002106!2.48e-11!3;UBERON:0004854!2.48e-11!3;UBERON:0009034!2.48e-11!3;UBERON:0002095!2.48e-11!3;UBERON:0004782!2.48e-11!3;UBERON:0003281!2.48e-11!3;UBERON:0009664!2.48e-11!3;UBERON:0002296!2.48e-11!3;UBERON:0005602!2.48e-11!3;UBERON:0001179!2.48e-11!3;UBERON:0006293!2.48e-11!3;UBERON:0004177!2.54e-08!7;UBERON:0002384!5.35e-07!375 | |ontology_enrichment_uberon=UBERON:0002106!2.48e-11!3;UBERON:0004854!2.48e-11!3;UBERON:0009034!2.48e-11!3;UBERON:0002095!2.48e-11!3;UBERON:0004782!2.48e-11!3;UBERON:0003281!2.48e-11!3;UBERON:0009664!2.48e-11!3;UBERON:0002296!2.48e-11!3;UBERON:0005602!2.48e-11!3;UBERON:0001179!2.48e-11!3;UBERON:0006293!2.48e-11!3;UBERON:0004177!2.54e-08!7;UBERON:0002384!5.35e-07!375 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p1@ENST00000423967 | |short_description=p1@ENST00000423967 | ||
}} | }} |
Latest revision as of 18:26, 28 July 2015
Short description: | p1@ENST00000423967 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000423967_5end |
Coexpression cluster: | C650_CD19_B_lymphoma_xeroderma_splenic_Burkitt_plasma |
Association with transcript: | -27bp_to_ENST00000423967_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 3.08e-58 | 24 |
pro-B cell | 3.08e-58 | 24 |
plasmacytoid dendritic cell | 4.49e-42 | 3 |
lymphoid lineage restricted progenitor cell | 1.93e-26 | 52 |
lymphocyte | 6.34e-26 | 53 |
common lymphoid progenitor | 6.34e-26 | 53 |
B cell | 1.70e-25 | 14 |
leukocyte | 5.24e-19 | 136 |
antibody secreting cell | 6.44e-16 | 1 |
plasma cell | 6.44e-16 | 1 |
plasmablast | 6.44e-16 | 1 |
hematopoietic stem cell | 3.65e-15 | 168 |
hematopoietic cell | 2.49e-14 | 177 |
nongranular leukocyte | 9.52e-14 | 115 |
hematopoietic lineage restricted progenitor cell | 3.93e-13 | 120 |
dendritic cell | 5.35e-12 | 10 |
hematopoietic oligopotent progenitor cell | 1.95e-11 | 161 |
hematopoietic multipotent progenitor cell | 1.95e-11 | 161 |
mature B cell | 1.29e-08 | 2 |
pre-B-II cell | 1.29e-08 | 2 |
transitional stage B cell | 1.29e-08 | 2 |
small pre-B-II cell | 1.29e-08 | 2 |
immature B cell | 1.29e-08 | 2 |
eosinophil | 2.15e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
genetic disease | 5.56e-16 | 1 |
monogenic disease | 5.56e-16 | 1 |
xeroderma pigmentosum | 5.56e-16 | 1 |