FFCP PHASE1:Hg19::chr1:85742091..85742102,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr1:85742091..85742102,-
|short_description=p4@BCL10
|description=CAGE_peak_4_at_BCL10_5end
|association_with_transcript=36bp_to_ENST00000394761_5end
|EntrezG...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=8915 | |EntrezGene=8915 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=989 | |HGNC=989 | ||
|TSSclassifier=strong | |||
|UniProt=O95999 | |UniProt=O95999 | ||
|association_with_transcript=36bp_to_ENST00000394761_5end | |||
|cluster_id=chr1:85742091..85742102,- | |||
|description=CAGE_peak_4_at_BCL10_5end | |||
|id=chr1:85742091..85742102,- | |||
|ontology_enrichment_celltype=CL:0000548!2.23e-12!679;CL:0000004!2.23e-12!679;CL:0000255!2.23e-12!679;CL:0002139!6.14e-12!24;CL:0002371!6.56e-12!591;CL:0000012!1.05e-11!682;CL:0000222!3.80e-11!119;CL:0002321!5.92e-11!248;CL:0000220!7.11e-11!246;CL:0002078!1.83e-10!44;CL:0000144!2.04e-10!625;CL:0000115!9.28e-10!35;CL:0000071!1.38e-09!18;CL:0002546!1.38e-09!18;CL:0000213!4.46e-08!57;CL:0000215!4.46e-08!57;CL:1000413!1.87e-07!9;CL:0000076!3.18e-07!62;CL:0000063!5.32e-07!578 | |||
|ontology_enrichment_celltype_v019=CL:0002139;9.01e-27;24!CL:0000071;1.44e-23;18!CL:0000115;1.14e-19;36!CL:1000413;1.01e-15;9!CL:0002078;4.26e-15;45!CL:0002544;5.79e-11;6!CL:0000213;1.43e-09;58!CL:0000215;1.43e-09;58 | |||
|ontology_enrichment_celltype_v019_2=CL:0002139,3.79e-27,24;CL:0002078,2.56e-24,45;CL:0000071,6.61e-24,18;CL:0002546,6.61e-24,18;CL:0000115,7.03e-24,36;CL:1000413,4.82e-16,9;CL:0000213,2.31e-15,58;CL:0000215,2.31e-15,58;CL:0002321,9.17e-14,250;CL:0000222,3.44e-13,121;CL:0002544,2.75e-11,6;CL:0000066,2.06e-10,253;CL:0000076,1.15e-07,63;CL:0002144,9.01e-07,3 | |||
|ontology_enrichment_development_v019=CL:0002546;1.44e-23;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003914!3.98e-11!118;UBERON:0006914!9.39e-10!25;UBERON:0001986!1.38e-09!18;UBERON:0004638!1.38e-09!18;UBERON:0004852!1.38e-09!18;UBERON:0000487!1.69e-09!22;UBERON:0000490!9.65e-09!138;UBERON:0000926!1.03e-08!448;UBERON:0004120!1.03e-08!448;UBERON:0006603!1.03e-08!448;UBERON:0000055!2.34e-08!69;UBERON:0002049!2.44e-08!79;UBERON:0007798!2.44e-08!79;UBERON:0004535!2.90e-08!110;UBERON:0004872!3.63e-08!84;UBERON:0000480!8.23e-08!626;UBERON:0000467!8.42e-08!625;UBERON:0001009!9.68e-08!113;UBERON:0003915!1.87e-07!9;UBERON:0004700!1.87e-07!9;UBERON:0001917!1.87e-07!9;UBERON:0001981!1.90e-07!60;UBERON:0007500!1.90e-07!60;UBERON:0004537!1.90e-07!60;UBERON:0006965!1.90e-07!60;UBERON:0001637!2.99e-07!42;UBERON:0003509!2.99e-07!42;UBERON:0004572!2.99e-07!42;UBERON:0000468!7.63e-07!659 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;1.44e-23;18!UBERON:0001986;1.44e-23;18!UBERON:0004852;1.44e-23;18!UBERON:0000487;1.33e-20;22!UBERON:0006914;1.50e-19;25!UBERON:0003915;1.01e-15;9!UBERON:0004700;1.01e-15;9!UBERON:0001917;1.01e-15;9!UBERON:0000490;1.50e-13;33!UBERON:0000055;1.87e-10;65!UBERON:0003914;2.06e-10;74!UBERON:0007500;4.29e-10;56!UBERON:0001981;4.29e-10;56!UBERON:0004537;4.29e-10;56!UBERON:0001637;7.12e-09;42!UBERON:0003509;7.12e-09;42!UBERON:0004572;7.12e-09;42!UBERON:0010260;1.66e-08;9!UBERON:0001708;1.71e-07;4!UBERON:0008895;1.71e-07;4!UBERON:0002049;2.54e-07;75!UBERON:0007798;2.54e-07;75 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004638,6.61e-24,18;UBERON:0001986,6.61e-24,18;UBERON:0004852,6.61e-24,18;UBERON:0000487,7.45e-21,22;UBERON:0006914,9.65e-20,25;UBERON:0000055,3.92e-18,68;UBERON:0007500,4.80e-16,59;UBERON:0001981,4.80e-16,59;UBERON:0004537,4.80e-16,59;UBERON:0006965,4.80e-16,59;UBERON:0003915,4.82e-16,9;UBERON:0004700,4.82e-16,9;UBERON:0001917,4.82e-16,9;UBERON:0002049,1.60e-15,78;UBERON:0007798,1.60e-15,78;UBERON:0003914,3.66e-14,117;UBERON:0004872,8.00e-14,83;UBERON:0004535,1.75e-12,109;UBERON:0001009,7.35e-12,112;UBERON:0001637,2.34e-11,42;UBERON:0003509,2.34e-11,42;UBERON:0004572,2.34e-11,42;UBERON:0010260,1.74e-08,9;UBERON:0000490,6.07e-08,148;UBERON:0001708,2.55e-07,4;UBERON:0008895,2.55e-07,4;UBERON:0000926,3.27e-07,315;UBERON:0004120,3.27e-07,315;UBERON:0006603,3.27e-07,315;UBERON:0010523,9.01e-07,3;UBERON:0001915,9.01e-07,3;UBERON:0001982,9.01e-07,3;UBERON:0000947,9.36e-07,21;UBERON:0010191,9.36e-07,21 | |||
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|phase1_expression=0.363356758541113,0.428201047781966,0.563817616383885,0,0.893922188854576,0,0,1.89515962028049,0.261185628199839,0.982935746006035,0.697801167972428,0.436882744260345,0.527533956456907,0.37129905888014,0,0,1.80808358407193,0,1.46379839637152,0,0,0.313454721478088,0.286235987131057,0.410623275218653,0.251085279189606,0,0.0821005894499457,0.157421562627358,0.393364276848904,0,0.619264493264304,0,0,1.10926203050036,0,0,0,0.553995408531877,0.601633342410425,1.08505435357926,0.671746422719773,0,0.515151135268373,0.581592955118259,1.51150377475524,1.4555043671269,0.929716147622738,0.411167888021826,0.929119112685311,0.28769239232215,0.768482119587302,1.18241114944293,0.344745680736619,0,0,0.752969358170419,0,0.449446968890169,0,0,0.639337125799041,0,0.199463657621632,0.852449501065388,0.290209238628584,0.56738522469114,0.622822248995575,0,0,0.434377689410233,0,0.736555271975129,0.632924774881769,0.845021145247767,0.637812899895131,1.04829322754188,0.112328631146495,0.450530678524519,0.64290234678832,0.570025487482497,0.99458338599545,0.182664153764634,0,0,0,0,0.400395987036012,0,0,0,0,0,0.382273228125229,0,0,0,0,0,0.205601498999509,0,0,0,0,0.111410456885174,0,0,0,0,0,0,0,0,0,0,0,0,0.383220493601921,0,0,0,0,0,0.150575119077773,0.127986611154418,1.24930726552346,0,0,0,0,0.144824403882799,0,0.670700859703636,0.767175371061182,0.722878304769133,0.50133791063589,0.434539556882471,2.3858578411533,0.973269740605272,0.472674085820339,0.221729397462564,0.351339142772504,0.196468613246569,0,0.370784442784429,0.97364218096405,0.522389211897802,0.664789802594326,0,1.14398982156026,0.371457501329565,2.98143611050058,5.16140757063675,1.73570250803797,2.82653970962005,2.09749718104953,4.40188867104108,2.92592953151535,4.39308490587859,4.26919515224052,4.01664735317604,4.83395180530976,7.60272105718513,2.92874469057803,3.67663080345869,4.0507097394088,3.48268940307911,2.69435247151404,2.13961812918312,0,0,4.39684185432977,2.63560834872127,11.6334079244498,0.436094052142534,1.49091585508596,0.379891534993739,5.82600395578163,0,0.709336764396714,0.560677600142307,1.06748995729705,1.97334038733728,0.933633106199299,0.538842688278752,0.980771418680752,0.151357427644931,0.576175924479999,0,2.49728061464256,0.570471821544449,3.73621701379503,0.117434498643765,0.161872944368132,0.421352420106746,0.204154171254893,0.61417158655884,0.413303124703062,1.18800285728205,0.247266929278557,0,0,0.168336113954066,0.250237039743928,2.49357703935765,0,0,0.901428353439581,0.907457465280168,0.179389635688862,0,0.635795703478686,0.300091096084402,0.92747276314595,0,0.37223371266318,0.506328996723799,0.194874010322397,0,0.644349290496095,0.484938170456436,0,0.201504196455281,0.339121184620975,0.386521706326594,2.18196896472668,2.00763216772303,0.365921118388786,0.265059536642971,0.232387885739037,0.207322110030741,0,0.36497735907583,1.56449532329816,0,0,0.464367928031979,0.721879481669586,0,0,0,0,0,0.237270619111097,0,0,0,4.42893272774789,0,0,0,0,0,0,0,0.122988438543114,1.02940686179115,0.768251997860379,0,0.804231779293047,1.11106134190236,0.651616610620649,0,2.88662684050547,0.231860809950154,0.821860859650752,1.58803092537181,0.462985512576611,0.380508304469197,0.790204397959275,0,0.984868024349589,0,0.743155811443641,2.81201501960331,3.69560682037491,2.55195175036296,0.895585227028483,0.871901815541886,1.53353071666084,0,0.088048434013226,0.414656231081544,0.144119953416961,0,0.444485260045183,0,1.17217447210047,1.71072446022705,0.102827492703324,0,0,0.336393253036082,0.43596006883328,0.51336800074665,0.517086863031111,0,0,0.531876233169741,0,0.257207374262142,0,0,0.428933980974443,0.542621605391443,0,0.65147236858747,0.355391948742546,0,0,0.871533458600294,0.199945982364114,0,0.502257091432126,0,1.67737398844108,0,0,1.30303176000821,0.205476322550383,0.179060963239896,0,0.197030760201927,0,0.128343036279748,0.508189248444927,1.30139853857622,0,0,0,2.24702107184155,0,1.65766205374414,0.49076596687656,0,0.271265023699736,0.207970861530807,0.713715955188647,0,0.468565659970853,0.902838299183157,0,0,0,1.10621501125022,0.868836144680828,0,0,0.620304078368662,0,0,0,0,0,0.496215615637554,0.153461973288062,0,0.256278298511402,0,0.965123526861645,0,0.925258162815933,0.710246901252508,0.739144404124282,1.03850885836724,0.464841513839837,0.362578348774867,2.80709058424599,0.184161977871793,0.803701137152247,1.45672934405374,0.262248829918848,0.451199612907412,0.616122696835318,0.784349769176855,1.46139224653261,1.68882606228601,0,3.40187410553031,1.72732732881711,1.54227252690289,0.270946437543853,0,1.52925763827023,0,1.79099803777743,0,0,0.256450125116389,0.328014645699706,0,0.721287081534056,0.54941678891006,0.247528499761764,1.14853107599234,0,0,0.290012154876366,0.308097234229289,0.15350367472613,0.137836572484531,0.214840489736547,0.435050081742686,0.255679882248303,0.356128142586949,0.330569830721956,0.192190067365106,1.78657797492418,0.6069466851333,0.464845549297286,1.88887408098384,0,0.308033580176089,0.532306030317022,0.86993299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| ||
|short_description=p4@BCL10 | |||
}} | }} |
Latest revision as of 12:57, 19 September 2015
Short description: | p4@BCL10 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_BCL10_5end |
Coexpression cluster: | NA |
Association with transcript: | 36bp_to_ENST00000394761_5end |
EntrezGene: | BCL10 |
HGNC: | 989 |
UniProt: | O95999 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 3.79e-27 | 24 |
meso-epithelial cell | 2.56e-24 | 45 |
blood vessel endothelial cell | 6.61e-24 | 18 |
embryonic blood vessel endothelial progenitor cell | 6.61e-24 | 18 |
endothelial cell | 7.03e-24 | 36 |
endothelial cell of artery | 4.82e-16 | 9 |
lining cell | 2.31e-15 | 58 |
barrier cell | 2.31e-15 | 58 |
embryonic cell | 9.17e-14 | 250 |
mesodermal cell | 3.44e-13 | 121 |
aortic endothelial cell | 2.75e-11 | 6 |
epithelial cell | 2.06e-10 | 253 |
squamous epithelial cell | 1.15e-07 | 63 |
capillary endothelial cell | 9.01e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
blood vessel endothelium | 6.61e-24 | 18 |
endothelium | 6.61e-24 | 18 |
cardiovascular system endothelium | 6.61e-24 | 18 |
simple squamous epithelium | 7.45e-21 | 22 |
squamous epithelium | 9.65e-20 | 25 |
vessel | 3.92e-18 | 68 |
epithelial tube open at both ends | 4.80e-16 | 59 |
blood vessel | 4.80e-16 | 59 |
blood vasculature | 4.80e-16 | 59 |
vascular cord | 4.80e-16 | 59 |
endothelial tube | 4.82e-16 | 9 |
arterial system endothelium | 4.82e-16 | 9 |
endothelium of artery | 4.82e-16 | 9 |
vasculature | 1.60e-15 | 78 |
vascular system | 1.60e-15 | 78 |
epithelial tube | 3.66e-14 | 117 |
splanchnic layer of lateral plate mesoderm | 8.00e-14 | 83 |
cardiovascular system | 1.75e-12 | 109 |
circulatory system | 7.35e-12 | 112 |
artery | 2.34e-11 | 42 |
arterial blood vessel | 2.34e-11 | 42 |
arterial system | 2.34e-11 | 42 |
umbilical blood vessel | 1.74e-08 | 9 |
unilaminar epithelium | 6.07e-08 | 148 |
jaw skeleton | 2.55e-07 | 4 |
splanchnocranium | 2.55e-07 | 4 |
mesoderm | 3.27e-07 | 315 |
mesoderm-derived structure | 3.27e-07 | 315 |
presumptive mesoderm | 3.27e-07 | 315 |
microcirculatory vessel | 9.01e-07 | 3 |
endothelium of capillary | 9.01e-07 | 3 |
capillary | 9.01e-07 | 3 |
aorta | 9.36e-07 | 21 |
aortic system | 9.36e-07 | 21 |