FFCP PHASE1:Hg19::chr8:124955722..124955732,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr8:124955722..124955732,+ | |||
|coexpression_cluster_id=C238 | |coexpression_cluster_id=C238 | ||
|description=CAGE_peak_at_chr8:124955722..124955732,+ | |description=CAGE_peak_at_chr8:124955722..124955732,+ | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0002253!3.02e-11!2 | |ontology_enrichment_celltype=CL:0002253!3.02e-11!2 | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006242;2.70e-40;1!UBERON:0004161;2.09e-15;11!UBERON:0009497;3.32e-13;13 | |ontology_enrichment_development_v019=UBERON:0006242;2.70e-40;1!UBERON:0004161;2.09e-15;11!UBERON:0009497;3.32e-13;13 | ||
|ontology_enrichment_disease=DOID:3493!3.70e-11!2 | |ontology_enrichment_disease=DOID:3493!3.70e-11!2 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002146!5.16e-21!1;UBERON:0005623!5.16e-21!1;UBERON:0002110!5.54e-08!3;UBERON:0006242!5.54e-08!3;UBERON:0003978!6.78e-08!3;UBERON:0009751!6.78e-08!3;UBERON:0000946!6.78e-08!3;UBERON:0002523!6.78e-08!3;UBERON:0005983!6.78e-08!3;UBERON:0002165!6.78e-08!3;UBERON:0002062!6.78e-08!3;UBERON:0007280!6.78e-08!3 | |ontology_enrichment_uberon=UBERON:0002146!5.16e-21!1;UBERON:0005623!5.16e-21!1;UBERON:0002110!5.54e-08!3;UBERON:0006242!5.54e-08!3;UBERON:0003978!6.78e-08!3;UBERON:0009751!6.78e-08!3;UBERON:0000946!6.78e-08!3;UBERON:0002523!6.78e-08!3;UBERON:0005983!6.78e-08!3;UBERON:0002165!6.78e-08!3;UBERON:0002062!6.78e-08!3;UBERON:0007280!6.78e-08!3 | ||
|ontology_enrichment_uberon_v019=UBERON:0002114;1.60e-14;2!UBERON:0002110;1.96e-14;3!UBERON:0000945;2.53e-09;5!UBERON:0010039;2.53e-09;5!UBERON:0002108;2.97e-09;4!UBERON:0005409;6.08e-08;22!UBERON:0002423;2.39e-07;25!UBERON:0001871;6.21e-07;6!UBERON:0002294;6.21e-07;7!UBERON:0001173;6.21e-07;7!UBERON:0000922;8.48e-07;49 | |ontology_enrichment_uberon_v019=UBERON:0002114;1.60e-14;2!UBERON:0002110;1.96e-14;3!UBERON:0000945;2.53e-09;5!UBERON:0010039;2.53e-09;5!UBERON:0002108;2.97e-09;4!UBERON:0005409;6.08e-08;22!UBERON:0002423;2.39e-07;25!UBERON:0001871;6.21e-07;6!UBERON:0002294;6.21e-07;7!UBERON:0001173;6.21e-07;7!UBERON:0000922;8.48e-07;49 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002114,1.60e-14,2;UBERON:0002110,1.83e-14,3;UBERON:0006242,1.83e-14,3;UBERON:0002108,2.97e-09,4;UBERON:0009497,2.35e-07,25;UBERON:0000015,2.35e-07,25;UBERON:0002423,2.35e-07,25;UBERON:0006235,2.35e-07,25;UBERON:0004161,2.35e-07,25;UBERON:0005409,3.90e-07,25;UBERON:0001871,6.39e-07,6 | |||
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|short_description=p@chr8:124955722..124955732,+ | |short_description=p@chr8:124955722..124955732,+ | ||
}} | }} |
Latest revision as of 14:37, 31 July 2015
Short description: | p@chr8:124955722..124955732, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr8:124955722..124955732, + |
Coexpression cluster: | C238_stomach_gall_breast_duodenum_temporal_MCF7_smallcell |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
duodenum | 1.60e-14 | 2 |
gallbladder | 1.83e-14 | 3 |
gall bladder primordium | 1.83e-14 | 3 |
small intestine | 2.97e-09 | 4 |
epithelium of foregut-midgut junction | 2.35e-07 | 25 |
anatomical boundary | 2.35e-07 | 25 |
hepatobiliary system | 2.35e-07 | 25 |
foregut-midgut junction | 2.35e-07 | 25 |
septum transversum | 2.35e-07 | 25 |
gastrointestinal system | 3.90e-07 | 25 |
temporal lobe | 6.39e-07 | 6 |