FFCP PHASE1:Hg19::chr4:106815585..106815594,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=255743 | |EntrezGene=255743 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=27405 | |HGNC=27405 | ||
|TSSclassifier=strong | |||
|UniProt=D6RE63 | |UniProt=D6RE63 | ||
|association_with_transcript=-337bp_to_ENST00000504304_5end | |association_with_transcript=-337bp_to_ENST00000504304_5end | ||
|cluster_id=chr4:106815585..106815594,+ | |||
|description=CAGE_peak_19_at_NPNT_5end | |description=CAGE_peak_19_at_NPNT_5end | ||
|id=chr4:106815585..106815594,+ | |id=chr4:106815585..106815594,+ | ||
|ontology_enrichment_celltype=CL:0000575!3.35e-12!2 | |ontology_enrichment_celltype=CL:0000575!3.35e-12!2 | ||
|ontology_enrichment_celltype_v019=CL:0002327;8.81e-14;4 | |ontology_enrichment_celltype_v019=CL:0002327;8.81e-14;4 | ||
|ontology_enrichment_celltype_v019_2=CL:0002327,8.82e-14,4 | |||
|ontology_enrichment_development_v019=UBERON:0008425;1.46e-50;1!UBERON:0008947;7.15e-08;29 | |ontology_enrichment_development_v019=UBERON:0008425;1.46e-50;1!UBERON:0008947;7.15e-08;29 | ||
|ontology_enrichment_disease=DOID:5093!1.52e-13!4;DOID:1612!1.52e-13!4;DOID:305!6.08e-13!106;DOID:0050687!9.70e-10!143;DOID:630!3.73e-07!1;DOID:0050177!3.73e-07!1;DOID:0050427!3.73e-07!1 | |ontology_enrichment_disease=DOID:5093!1.52e-13!4;DOID:1612!1.52e-13!4;DOID:305!6.08e-13!106;DOID:0050687!9.70e-10!143;DOID:630!3.73e-07!1;DOID:0050177!3.73e-07!1;DOID:0050427!3.73e-07!1 | ||
|ontology_enrichment_disease_v019=DOID:5093;4.00e-50;4!DOID:1612;4.00e-50;4 | |ontology_enrichment_disease_v019=DOID:5093;4.00e-50;4!DOID:1612;4.00e-50;4 | ||
|ontology_enrichment_disease_v019_2=DOID:5093,3.11e-50,4;DOID:1612,3.11e-50,4;DOID:305,2.62e-08,106 | |||
|ontology_enrichment_uberon=UBERON:0001737!5.61e-49!9;UBERON:0001557!2.10e-22!19;UBERON:0008947!6.79e-13!38;UBERON:0003258!6.79e-13!38;UBERON:0000065!9.93e-09!53;UBERON:0000072!2.38e-08!46;UBERON:0000063!3.00e-08!97;UBERON:0001154!8.27e-07!1;UBERON:0001153!8.27e-07!1 | |ontology_enrichment_uberon=UBERON:0001737!5.61e-49!9;UBERON:0001557!2.10e-22!19;UBERON:0008947!6.79e-13!38;UBERON:0003258!6.79e-13!38;UBERON:0000065!9.93e-09!53;UBERON:0000072!2.38e-08!46;UBERON:0000063!3.00e-08!97;UBERON:0001154!8.27e-07!1;UBERON:0001153!8.27e-07!1 | ||
|ontology_enrichment_uberon_v019=UBERON:0001737;6.41e-23;9!UBERON:0001557;6.41e-23;9!UBERON:0000310;7.72e-21;10!UBERON:0001443;4.69e-19;11!UBERON:0001911;8.81e-14;4 | |ontology_enrichment_uberon_v019=UBERON:0001737;6.41e-23;9!UBERON:0001557;6.41e-23;9!UBERON:0000310;7.72e-21;10!UBERON:0001443;4.69e-19;11!UBERON:0001911;8.81e-14;4 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,7.17e-23,9;UBERON:0000310,6.99e-21,10;UBERON:0001443,4.28e-19,11;UBERON:0001911,8.82e-14,4;UBERON:0005333,8.82e-14,4;UBERON:0008425,8.82e-14,4;UBERON:0005311,8.82e-14,4;UBERON:0001557,1.91e-11,19;UBERON:0000076,1.49e-07,8 | |||
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|short_description=p19@NPNT | |short_description=p19@NPNT | ||
}} | }} |
Latest revision as of 06:45, 20 September 2015
Short description: | p19@NPNT |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_19_at_NPNT_5end |
Coexpression cluster: | NA |
Association with transcript: | -337bp_to_ENST00000504304_5end |
EntrezGene: | NPNT |
HGNC: | 27405 |
UniProt: | D6RE63 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mammary gland epithelial cell | 8.82e-14 | 4 |
Ontology term | p-value | n |
---|---|---|
larynx | 7.17e-23 | 9 |
breast | 6.99e-21 | 10 |
chest | 4.28e-19 | 11 |
mammary gland | 8.82e-14 | 4 |
mammary bud | 8.82e-14 | 4 |
mammary ridge | 8.82e-14 | 4 |
mammary placode | 8.82e-14 | 4 |
upper respiratory tract | 1.91e-11 | 19 |
external ectoderm | 1.49e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
thoracic cancer | 3.11e-50 | 4 |
breast cancer | 3.11e-50 | 4 |
carcinoma | 2.62e-08 | 106 |