FFCP PHASE1:Hg19::chr12:12654228..12654244,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(4 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:12654228..12654244,- | |||
|coexpression_cluster_id=C343 | |coexpression_cluster_id=C343 | ||
|description=CAGE_peak_at_chr12:12654228..12654244,- | |description=CAGE_peak_at_chr12:12654228..12654244,- | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000624!2.28e-35!6;CL:0000791!6.45e-25!18;CL:0000789!6.45e-25!18;CL:0002420!6.45e-25!18;CL:0002419!6.45e-25!18;CL:0000790!6.45e-25!18;CL:0000898!8.15e-19!3;CL:0000084!1.61e-17!25;CL:0000827!1.61e-17!25;CL:0000815!3.48e-13!2;CL:0000792!3.48e-13!2;CL:0002677!3.48e-13!2;CL:0000838!1.93e-09!52;CL:0000542!3.14e-09!53;CL:0000051!3.14e-09!53;CL:0000080!7.24e-09!6;CL:0002619!1.29e-08!3;CL:0000842!2.28e-08!3;CL:0000810!2.37e-07!1;CL:0000895!2.37e-07!1;CL:0002436!2.37e-07!1;CL:0002427!2.37e-07!1;CL:0002428!2.37e-07!1;CL:0002429!2.37e-07!1;CL:0002433!2.37e-07!1;CL:0002431!2.37e-07!1;CL:0002432!2.37e-07!1 | |ontology_enrichment_celltype=CL:0000624!2.28e-35!6;CL:0000791!6.45e-25!18;CL:0000789!6.45e-25!18;CL:0002420!6.45e-25!18;CL:0002419!6.45e-25!18;CL:0000790!6.45e-25!18;CL:0000898!8.15e-19!3;CL:0000084!1.61e-17!25;CL:0000827!1.61e-17!25;CL:0000815!3.48e-13!2;CL:0000792!3.48e-13!2;CL:0002677!3.48e-13!2;CL:0000838!1.93e-09!52;CL:0000542!3.14e-09!53;CL:0000051!3.14e-09!53;CL:0000080!7.24e-09!6;CL:0002619!1.29e-08!3;CL:0000842!2.28e-08!3;CL:0000810!2.37e-07!1;CL:0000895!2.37e-07!1;CL:0002436!2.37e-07!1;CL:0002427!2.37e-07!1;CL:0002428!2.37e-07!1;CL:0002429!2.37e-07!1;CL:0002433!2.37e-07!1;CL:0002431!2.37e-07!1;CL:0002432!2.37e-07!1 | ||
|ontology_enrichment_celltype_v019=CL:0000815;1.91e-15;2!CL:0000792;1.91e-15;2!CL:0002677;1.91e-15;2!CL:0000898;9.43e-11;3 | |ontology_enrichment_celltype_v019=CL:0000815;1.91e-15;2!CL:0000792;1.91e-15;2!CL:0002677;1.91e-15;2!CL:0000898;9.43e-11;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0000815,1.78e-15,2;CL:0000792,1.78e-15,2;CL:0002677,1.78e-15,2;CL:0000898,8.99e-11,3 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001042!3.20e-09!10;UBERON:0009145!3.20e-09!10;UBERON:0006562!2.16e-08!11;UBERON:0004177!9.75e-08!7;UBERON:0000029!3.20e-07!1;UBERON:0001736!3.40e-07!1;UBERON:0006298!3.40e-07!1;UBERON:0002372!7.73e-07!1;UBERON:0001961!7.73e-07!1;UBERON:0001744!7.73e-07!1;UBERON:0001735!7.73e-07!1 | |ontology_enrichment_uberon=UBERON:0001042!3.20e-09!10;UBERON:0009145!3.20e-09!10;UBERON:0006562!2.16e-08!11;UBERON:0004177!9.75e-08!7;UBERON:0000029!3.20e-07!1;UBERON:0001736!3.40e-07!1;UBERON:0006298!3.40e-07!1;UBERON:0002372!7.73e-07!1;UBERON:0001961!7.73e-07!1;UBERON:0001744!7.73e-07!1;UBERON:0001735!7.73e-07!1 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223915474239924,0.32389366601898,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590129310341499,0.393010762749165,0.616804496998528,0.334372990781356,0.977766799900771,0,0,8.80142609392871,2.94605907474837,2.43687284041983,1.35401931882508,6.78883994546078,5.07231455483525,0,0,0,0,0,0,0.679856056185397,0.766440987203842,0,1.01207876807801,0,0,0,0.301150238155546,0.255973222308837,0,0,0,0,0,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215627574859517,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.540031437238115,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.104421949505455,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157204305099666,0,0.496166021811951,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,0,0.0644578879735772,0,0,0,0,0,0.458729283404541,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0918948995348449,0,0,0,0,0,0,0,0,0.0620747142958579,0,0,0,0.217716747896961,0,0.134704106029175,0,0,0,0,0,0,0,0,0,0,0.201273793591026,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223915474239924,0.32389366601898,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590129310341499,0.393010762749165,0.616804496998528,0.334372990781356,0.977766799900771,0,0,8.80142609392871,2.94605907474837,2.43687284041983,1.35401931882508,6.78883994546078,5.07231455483525,0,0,0,0,0,0,0.679856056185397,0.766440987203842,0,1.01207876807801,0,0,0,0.301150238155546,0.255973222308837,0,0,0,0,0,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215627574859517,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.540031437238115,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.104421949505455,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157204305099666,0,0.496166021811951,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,0,0.0644578879735772,0,0,0,0,0,0.458729283404541,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0918948995348449,0,0,0,0,0,0,0,0,0.0620747142958579,0,0,0,0.217716747896961,0,0.134704106029175,0,0,0,0,0,0,0,0,0,0,0.201273793591026,0 | ||
|short_description=p@chr12:12654228..12654244,- | |short_description=p@chr12:12654228..12654244,- | ||
}} | }} |
Latest revision as of 06:33, 24 July 2015
Short description: | p@chr12:12654228..12654244, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:12654228..12654244, - |
Coexpression cluster: | C343_CD4_mycosis_kidney_signet_hairy_b_Mast |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
regulatory T cell | 1.78e-15 | 2 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 1.78e-15 | 2 |
naive regulatory T cell | 1.78e-15 | 2 |
naive T cell | 8.99e-11 | 3 |