FFCP PHASE1:Hg19::chr17:41006104..41006119,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8639 | |EntrezGene=8639 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=550 | |HGNC=550 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=9bp_to_AK025727_5end | |association_with_transcript=9bp_to_AK025727_5end | ||
|cluster_id=chr17:41006104..41006119,+ | |||
|coexpression_cluster_id=C55 | |coexpression_cluster_id=C55 | ||
|description=CAGE_peak_4_at_AOC3_5end | |description=CAGE_peak_4_at_AOC3_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000181!7.69e-07!12;CL:0000417!7.69e-07!12;CL:0000668!7.69e-07!12;CL:0000414!7.69e-07!12;CL:0000412!7.69e-07!12;CL:0000182!7.69e-07!12 | |ontology_enrichment_celltype=CL:0000181!7.69e-07!12;CL:0000417!7.69e-07!12;CL:0000668!7.69e-07!12;CL:0000414!7.69e-07!12;CL:0000412!7.69e-07!12;CL:0000182!7.69e-07!12 | ||
|ontology_enrichment_celltype_v019=CL:0000182;8.61e-38;12 | |ontology_enrichment_celltype_v019=CL:0000182;8.61e-38;12 | ||
|ontology_enrichment_celltype_v019_2=CL:0000182,8.61e-38,12;CL:0000223,1.35e-08,58 | |||
|ontology_enrichment_development_v019=UBERON:0004161;4.07e-41;11!UBERON:0009497;5.63e-35;13!UBERON:0001041;9.12e-16;30!UBERON:0003104;5.87e-15;31 | |ontology_enrichment_development_v019=UBERON:0004161;4.07e-41;11!UBERON:0009497;5.63e-35;13!UBERON:0001041;9.12e-16;30!UBERON:0003104;5.87e-15;31 | ||
|ontology_enrichment_disease=DOID:9119!1.03e-09!1 | |ontology_enrichment_disease=DOID:9119!1.03e-09!1 | ||
|ontology_enrichment_disease_v019=DOID:9119;6.58e-50;1!DOID:7;7.45e-13;39 | |ontology_enrichment_disease_v019=DOID:9119;6.58e-50;1!DOID:7;7.45e-13;39 | ||
|ontology_enrichment_disease_v019_2=DOID:9119,6.58e-50,1;DOID:7,2.38e-12,39 | |||
|ontology_enrichment_uberon=UBERON:0000989!1.12e-09!1;UBERON:0008811!1.12e-09!1;UBERON:0006258!1.12e-09!1;UBERON:0005876!1.12e-09!1;UBERON:0004874!1.12e-09!1;UBERON:0009569!1.12e-09!113;UBERON:0007029!1.21e-09!1;UBERON:0006834!1.43e-09!1;UBERON:0001301!2.16e-09!1;UBERON:0002363!5.28e-09!1;UBERON:0007647!5.28e-09!1;UBERON:0010115!5.28e-09!1;UBERON:0002417!2.13e-07!61;UBERON:0000916!2.13e-07!61;UBERON:0005177!3.26e-07!107 | |ontology_enrichment_uberon=UBERON:0000989!1.12e-09!1;UBERON:0008811!1.12e-09!1;UBERON:0006258!1.12e-09!1;UBERON:0005876!1.12e-09!1;UBERON:0004874!1.12e-09!1;UBERON:0009569!1.12e-09!113;UBERON:0007029!1.21e-09!1;UBERON:0006834!1.43e-09!1;UBERON:0001301!2.16e-09!1;UBERON:0002363!5.28e-09!1;UBERON:0007647!5.28e-09!1;UBERON:0010115!5.28e-09!1;UBERON:0002417!2.13e-07!61;UBERON:0000916!2.13e-07!61;UBERON:0005177!3.26e-07!107 | ||
|ontology_enrichment_uberon_v019=UBERON:0002107;2.73e-24;19!UBERON:0006925;2.73e-24;19!UBERON:0002423;1.02e-18;25!UBERON:0002365;3.82e-14;31!UBERON:0002330;3.82e-14;31!UBERON:0002368;2.43e-13;33!UBERON:0000949;2.01e-10;43 | |ontology_enrichment_uberon_v019=UBERON:0002107;2.73e-24;19!UBERON:0006925;2.73e-24;19!UBERON:0002423;1.02e-18;25!UBERON:0002365;3.82e-14;31!UBERON:0002330;3.82e-14;31!UBERON:0002368;2.43e-13;33!UBERON:0000949;2.01e-10;43 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,2.73e-24,19;UBERON:0006925,2.73e-24,19;UBERON:0008836,2.73e-24,19;UBERON:0008835,3.99e-21,22;UBERON:0003894,3.99e-21,22;UBERON:0009854,2.97e-20,23;UBERON:0007499,1.02e-18,25;UBERON:0009497,1.02e-18,25;UBERON:0000015,1.02e-18,25;UBERON:0002423,1.02e-18,25;UBERON:0006235,1.02e-18,25;UBERON:0004161,1.02e-18,25;UBERON:0009856,4.90e-18,26;UBERON:0002365,2.73e-15,31;UBERON:0002330,2.73e-15,31;UBERON:0002368,1.18e-13,35;UBERON:0000949,7.94e-11,45;UBERON:0003929,3.61e-09,54;UBERON:0005172,3.61e-09,54;UBERON:0005173,3.61e-09,54;UBERON:0002530,1.83e-08,59;UBERON:0002417,2.45e-08,60;UBERON:0000916,2.45e-08,60 | |||
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|short_description=p4@AOC3 | |short_description=p4@AOC3 | ||
}} | }} |
Latest revision as of 16:41, 24 September 2015
Short description: | p4@AOC3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_AOC3_5end |
Coexpression cluster: | C55_hepatocellular_Intestinal_liver_Prostate_fibrosarcoma_Hepatocyte_hepatoblastoma |
Association with transcript: | 9bp_to_AK025727_5end |
EntrezGene: | AOC3 |
HGNC: | 550 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 8.61e-38 | 12 |
endodermal cell | 1.35e-08 | 58 |
Ontology term | p-value | n |
---|---|---|
liver | 2.73e-24 | 19 |
digestive gland | 2.73e-24 | 19 |
liver bud | 2.73e-24 | 19 |
hepatic diverticulum | 3.99e-21 | 22 |
liver primordium | 3.99e-21 | 22 |
digestive tract diverticulum | 2.97e-20 | 23 |
epithelial sac | 1.02e-18 | 25 |
epithelium of foregut-midgut junction | 1.02e-18 | 25 |
anatomical boundary | 1.02e-18 | 25 |
hepatobiliary system | 1.02e-18 | 25 |
foregut-midgut junction | 1.02e-18 | 25 |
septum transversum | 1.02e-18 | 25 |
sac | 4.90e-18 | 26 |
exocrine gland | 2.73e-15 | 31 |
exocrine system | 2.73e-15 | 31 |
endocrine gland | 1.18e-13 | 35 |
endocrine system | 7.94e-11 | 45 |
gut epithelium | 3.61e-09 | 54 |
abdomen element | 3.61e-09 | 54 |
abdominal segment element | 3.61e-09 | 54 |
gland | 1.83e-08 | 59 |
abdominal segment of trunk | 2.45e-08 | 60 |
abdomen | 2.45e-08 | 60 |
Ontology term | p-value | n |
---|---|---|
acute myeloid leukemia | 6.58e-50 | 1 |
disease of anatomical entity | 2.38e-12 | 39 |