FFCP PHASE1:Hg19::chr20:30433431..30433442,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr20:30433431..30433442,-
|short_description=p2@FOXS1
|description=CAGE_peak_2_at_FOXS1_5end
|association_with_transcript=-11bp_to_ENST00000375978,NM_004118,uc...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=2307 | |EntrezGene=2307 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3735 | |HGNC=3735 | ||
|TSSclassifier=strong | |||
|UniProt=O43638 | |UniProt=O43638 | ||
|association_with_transcript=-11bp_to_ENST00000375978,NM_004118,uc002wwt.1_5end | |||
|cluster_id=chr20:30433431..30433442,- | |||
|description=CAGE_peak_2_at_FOXS1_5end | |||
|id=chr20:30433431..30433442,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000064;2.46e-14;3!CL:0000067;2.46e-14;3!CL:0005012;2.46e-14;3!CL:0002304;2.46e-14;3!CL:0002549;1.14e-09;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000064,3.45e-14,3;CL:0000067,3.45e-14,3;CL:0005012,3.45e-14,3;CL:0002304,3.45e-14,3;CL:0002549,1.93e-09,2;CL:0002603,8.27e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0006965;6.89e-10;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:1192,6.74e-07,3 | |||
|ontology_enrichment_uberon=UBERON:0003075!3.67e-11!86;UBERON:0007284!3.67e-11!86;UBERON:0002346!3.32e-10!90;UBERON:0003103!5.44e-10!69;UBERON:0000025!6.21e-09!194;UBERON:0000119!7.71e-09!312;UBERON:0007100!8.32e-09!27;UBERON:0000153!2.76e-08!129;UBERON:0007811!2.76e-08!129;UBERON:0005743!3.36e-08!86;UBERON:0007023!3.76e-08!115;UBERON:0000073!4.85e-08!94;UBERON:0001016!4.85e-08!94;UBERON:0000483!8.36e-08!309;UBERON:0001017!1.44e-07!82;UBERON:0000955!1.66e-07!69;UBERON:0006238!1.66e-07!69;UBERON:0002616!2.53e-07!59;UBERON:0000481!3.79e-07!347;UBERON:0000477!4.02e-07!286;UBERON:0000488!5.81e-07!4;UBERON:0001009!6.88e-07!113;UBERON:0000033!7.09e-07!123 | |||
|ontology_enrichment_uberon_v019=UBERON:0000488;4.09e-18;4!UBERON:0001778;2.46e-14;3!UBERON:0001775;2.46e-14;3!UBERON:0006876;6.34e-14;11!UBERON:0002203;4.13e-12;6!UBERON:0001768;4.13e-12;6!UBERON:0002200;4.13e-12;6!UBERON:0007625;8.32e-10;11!UBERON:0005629;1.14e-09;2!UBERON:0005358;1.14e-09;2!UBERON:0001886;1.14e-09;2!UBERON:0004086;1.14e-09;2!UBERON:0005282;1.14e-09;2!UBERON:0005281;1.14e-09;2!UBERON:0001032;6.37e-08;24!UBERON:0004456;6.37e-08;24!UBERON:0001801;1.23e-07;14!UBERON:0002104;6.83e-07;21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000488,7.76e-18,4;UBERON:0001778,3.45e-14,3;UBERON:0001775,3.45e-14,3;UBERON:0006876,1.17e-13,11;UBERON:0002203,6.28e-12,6;UBERON:0001768,6.28e-12,6;UBERON:0002200,6.28e-12,6;UBERON:0007625,1.27e-09,11;UBERON:0005629,1.93e-09,2;UBERON:0005358,1.93e-09,2;UBERON:0001886,1.93e-09,2;UBERON:0004086,1.93e-09,2;UBERON:0005282,1.93e-09,2;UBERON:0005281,1.93e-09,2;UBERON:0001009,2.01e-09,112;UBERON:0002049,4.58e-09,78;UBERON:0007798,4.58e-09,78;UBERON:0004535,1.18e-08,109;UBERON:0003498,4.22e-08,5;UBERON:0005985,4.22e-08,5;UBERON:0000020,7.45e-08,24;UBERON:0001032,7.45e-08,24;UBERON:0004456,7.45e-08,24;UBERON:0001801,1.70e-07,14;UBERON:0000019,3.74e-07,20;UBERON:0000047,3.74e-07,20;UBERON:0010312,3.74e-07,20;UBERON:0004088,3.74e-07,20;UBERON:0010230,3.74e-07,20;UBERON:0003072,3.74e-07,20;UBERON:0004128,3.74e-07,20;UBERON:0003071,3.74e-07,20;UBERON:0007100,8.25e-07,27;UBERON:0000970,8.78e-07,21;UBERON:0002104,8.78e-07,21 | |||
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| ||
|short_description=p2@FOXS1 | |||
}} | }} |
Latest revision as of 01:31, 25 September 2015
Short description: | p2@FOXS1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_FOXS1_5end |
Coexpression cluster: | NA |
Association with transcript: | -11bp_to_ENST00000375978, NM_004118, uc002wwt.1_5end |
EntrezGene: | FOXS1 |
HGNC: | 3735 |
UniProt: | O43638 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ciliated cell | 3.45e-14 | 3 |
ciliated epithelial cell | 3.45e-14 | 3 |
multi-ciliated epithelial cell | 3.45e-14 | 3 |
non-pigmented ciliary epithelial cell | 3.45e-14 | 3 |
fibroblast of choroid plexus | 1.93e-09 | 2 |
astrocyte of the cerebellum | 8.27e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
atypical epithelium | 7.76e-18 | 4 |
ciliary epithelium | 3.45e-14 | 3 |
ciliary body | 3.45e-14 | 3 |
vasculature of organ | 1.17e-13 | 11 |
vasculature of eye | 6.28e-12 | 6 |
uvea | 6.28e-12 | 6 |
vasculature of head | 6.28e-12 | 6 |
pigment epithelium of eye | 1.27e-09 | 11 |
vascular plexus | 1.93e-09 | 2 |
ventricle of nervous system | 1.93e-09 | 2 |
choroid plexus | 1.93e-09 | 2 |
brain ventricle | 1.93e-09 | 2 |
ventricular system of brain | 1.93e-09 | 2 |
ventricular system of central nervous system | 1.93e-09 | 2 |
circulatory system | 2.01e-09 | 112 |
vasculature | 4.58e-09 | 78 |
vascular system | 4.58e-09 | 78 |
cardiovascular system | 1.18e-08 | 109 |
heart blood vessel | 4.22e-08 | 5 |
coronary vessel | 4.22e-08 | 5 |
sense organ | 7.45e-08 | 24 |
sensory system | 7.45e-08 | 24 |
entire sense organ system | 7.45e-08 | 24 |
anterior segment of eyeball | 1.70e-07 | 14 |
camera-type eye | 3.74e-07 | 20 |
simple eye | 3.74e-07 | 20 |
immature eye | 3.74e-07 | 20 |
ocular region | 3.74e-07 | 20 |
eyeball of camera-type eye | 3.74e-07 | 20 |
optic cup | 3.74e-07 | 20 |
optic vesicle | 3.74e-07 | 20 |
eye primordium | 3.74e-07 | 20 |
primary circulatory organ | 8.25e-07 | 27 |
eye | 8.78e-07 | 21 |
visual system | 8.78e-07 | 21 |
Ontology term | p-value | n |
---|---|---|
peripheral nervous system neoplasm | 6.74e-07 | 3 |