FFCP PHASE1:Hg19::chr11:26743598..26743612,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=159963 | |EntrezGene=159963 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28750 | |HGNC=28750 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-19bp_to_ENST00000528822_5end | |association_with_transcript=-19bp_to_ENST00000528822_5end | ||
|cluster_id=chr11:26743598..26743612,- | |||
|coexpression_cluster_id=C51 | |coexpression_cluster_id=C51 | ||
|description=CAGE_peak_2_at_SLC5A12_5end | |description=CAGE_peak_2_at_SLC5A12_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0007297;1.46e-13;2!UBERON:0003918;4.89e-11;10!UBERON:0007687;4.89e-11;10 | |ontology_enrichment_development_v019=UBERON:0007297;1.46e-13;2!UBERON:0003918;4.89e-11;10!UBERON:0007687;4.89e-11;10 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001301!1.41e-16!1;UBERON:0000160!9.77e-14!27;UBERON:0000059!3.95e-13!11;UBERON:0005409!1.09e-10!35;UBERON:0001155!9.20e-08!9 | |ontology_enrichment_uberon=UBERON:0001301!1.41e-16!1;UBERON:0000160!9.77e-14!27;UBERON:0000059!3.95e-13!11;UBERON:0005409!1.09e-10!35;UBERON:0001155!9.20e-08!9 | ||
|ontology_enrichment_uberon_v019=UBERON:0001301;1.11e-25;1!UBERON:0000160;2.61e-22;17!UBERON:0002108;8.98e-21;4!UBERON:0005409;1.39e-17;22!UBERON:0004921;6.05e-12;33!UBERON:0001155;6.69e-12;9!UBERON:0000059;6.48e-10;11!UBERON:0006947;1.74e-09;3!UBERON:0004054;1.74e-09;3!UBERON:0005904;1.98e-07;4 | |ontology_enrichment_uberon_v019=UBERON:0001301;1.11e-25;1!UBERON:0000160;2.61e-22;17!UBERON:0002108;8.98e-21;4!UBERON:0005409;1.39e-17;22!UBERON:0004921;6.05e-12;33!UBERON:0001155;6.69e-12;9!UBERON:0000059;6.48e-10;11!UBERON:0006947;1.74e-09;3!UBERON:0004054;1.74e-09;3!UBERON:0005904;1.98e-07;4 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001301,1.26e-25,1;UBERON:0000160,2.54e-22,17;UBERON:0002108,8.98e-21,4;UBERON:0005409,1.27e-15,25;UBERON:0001155,6.51e-12,9;UBERON:0000059,6.34e-10,11;UBERON:0006947,1.81e-09,3;UBERON:0004054,1.81e-09,3;UBERON:0002113,2.67e-09,26;UBERON:0003918,2.67e-09,26;UBERON:0011143,2.67e-09,26;UBERON:0005095,2.67e-09,26;UBERON:0007687,2.67e-09,26;UBERON:0000489,6.69e-08,31;UBERON:0005904,2.04e-07,4 | |||
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|short_description=p2@SLC5A12 | |short_description=p2@SLC5A12 | ||
}} | }} |
Latest revision as of 11:33, 17 September 2015
Short description: | p2@SLC5A12 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_SLC5A12_5end |
Coexpression cluster: | C51_kidney_mesothelioma_renal_signet_gall_lung_pancreas |
Association with transcript: | -19bp_to_ENST00000528822_5end |
EntrezGene: | SLC5A12 |
HGNC: | 28750 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epididymis | 1.26e-25 | 1 |
intestine | 2.54e-22 | 17 |
small intestine | 8.98e-21 | 4 |
gastrointestinal system | 1.27e-15 | 25 |
colon | 6.51e-12 | 9 |
large intestine | 6.34e-10 | 11 |
male genital duct | 1.81e-09 | 3 |
internal male genitalia | 1.81e-09 | 3 |
kidney | 2.67e-09 | 26 |
kidney mesenchyme | 2.67e-09 | 26 |
upper urinary tract | 2.67e-09 | 26 |
kidney rudiment | 2.67e-09 | 26 |
kidney field | 2.67e-09 | 26 |
cavitated compound organ | 6.69e-08 | 31 |
duct of male reproductive system | 2.04e-07 | 4 |