FFCP PHASE1:Hg19::chr19:37808831..37808843,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=284459 | |EntrezGene=284459 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4928 | |HGNC=4928 | ||
|TSSclassifier=strong | |||
|UniProt=F5H6A5 | |UniProt=F5H6A5 | ||
|association_with_transcript=18bp_to_ENST00000544914,uc002ofy.2_5end | |association_with_transcript=18bp_to_ENST00000544914,uc002ofy.2_5end | ||
|cluster_id=chr19:37808831..37808843,+ | |||
|coexpression_cluster_id=C128 | |coexpression_cluster_id=C128 | ||
|description=CAGE_peak_6_at_HKR1_5end | |description=CAGE_peak_6_at_HKR1_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0002322!6.21e-07!5 | |ontology_enrichment_celltype=CL:0002322!6.21e-07!5 | ||
|ontology_enrichment_celltype_v019=CL:0000039;2.58e-22;7!CL:0000586;2.58e-22;7!CL:0002521;7.08e-07;3 | |ontology_enrichment_celltype_v019=CL:0000039;2.58e-22;7!CL:0000586;2.58e-22;7!CL:0002521;7.08e-07;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0000039,2.59e-22,7;CL:0000586,2.59e-22,7;CL:0002521,6.88e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0009117;7.83e-16;10!UBERON:0005564;7.83e-16;10 | |ontology_enrichment_development_v019=UBERON:0009117;7.83e-16;10!UBERON:0005564;7.83e-16;10 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3095;1.41e-12;22!DOID:2994;1.41e-12;22!DOID:0060084;9.11e-07;3!DOID:127;9.11e-07;3 | |ontology_enrichment_disease_v019=DOID:3095;1.41e-12;22!DOID:2994;1.41e-12;22!DOID:0060084;9.11e-07;3!DOID:127;9.11e-07;3 | ||
|ontology_enrichment_disease_v019_2=DOID:3095,1.43e-12,22;DOID:2994,1.43e-12,22;DOID:0060084,9.64e-07,3;DOID:127,9.64e-07,3 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0000473;1.29e-19;8!UBERON:0003135;1.87e-14;11!UBERON:0000991;7.53e-08;21!UBERON:0003101;1.62e-07;22!UBERON:0000079;1.62e-07;22!UBERON:0000922;3.20e-07;49!UBERON:0002190;7.08e-07;3 | |ontology_enrichment_uberon_v019=UBERON:0000473;1.29e-19;8!UBERON:0003135;1.87e-14;11!UBERON:0000991;7.53e-08;21!UBERON:0003101;1.62e-07;22!UBERON:0000079;1.62e-07;22!UBERON:0000922;3.20e-07;49!UBERON:0002190;7.08e-07;3 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,1.29e-19,8;UBERON:0003135,1.87e-14,11;UBERON:0000991,7.53e-08,21;UBERON:0009196,7.53e-08,21;UBERON:0009117,7.53e-08,21;UBERON:0005564,7.53e-08,21;UBERON:0004176,1.62e-07,22;UBERON:0003101,1.62e-07,22;UBERON:0000079,1.62e-07,22;UBERON:0002190,6.88e-07,3 | |||
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| ||
|short_description=p6@HKR1 | |short_description=p6@HKR1 | ||
}} | }} |
Latest revision as of 17:51, 17 September 2015
Short description: | p6@HKR1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_HKR1_5end |
Coexpression cluster: | C128_testicular_choriocarcinoma_H9_teratocarcinoma_pancreatic_iPS_HES3GFP |
Association with transcript: | 18bp_to_ENST00000544914, uc002ofy.2_5end |
EntrezGene: | HKR1 |
HGNC: | 4928 |
UniProt: | F5H6A5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 2.59e-22 | 7 |
germ cell | 2.59e-22 | 7 |
subcutaneous fat cell | 6.88e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
testis | 1.29e-19 | 8 |
male reproductive organ | 1.87e-14 | 11 |
gonad | 7.53e-08 | 21 |
indifferent external genitalia | 7.53e-08 | 21 |
indifferent gonad | 7.53e-08 | 21 |
gonad primordium | 7.53e-08 | 21 |
external genitalia | 1.62e-07 | 22 |
male organism | 1.62e-07 | 22 |
male reproductive system | 1.62e-07 | 22 |
subcutaneous adipose tissue | 6.88e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 1.43e-12 | 22 |
germ cell cancer | 1.43e-12 | 22 |
cell type benign neoplasm | 9.64e-07 | 3 |
leiomyoma | 9.64e-07 | 3 |