FFCP PHASE1:Hg19::chr12:21284105..21284114,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10599 | |EntrezGene=10599 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10959 | |HGNC=10959 | ||
|TSSclassifier=strong | |||
|UniProt=Q05CV5,Q9Y6L6 | |UniProt=Q05CV5,Q9Y6L6 | ||
|association_with_transcript=-13bp_to_NM_006446,uc001req.3_5end | |association_with_transcript=-13bp_to_NM_006446,uc001req.3_5end | ||
|cluster_id=chr12:21284105..21284114,+ | |||
|coexpression_cluster_id=C5 | |coexpression_cluster_id=C5 | ||
|description=CAGE_peak_2_at_SLCO1B1_5end | |description=CAGE_peak_2_at_SLCO1B1_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000181!2.40e-14!12;CL:0000417!2.40e-14!12;CL:0000668!2.40e-14!12;CL:0000414!2.40e-14!12;CL:0000412!2.40e-14!12;CL:0000182!2.40e-14!12 | |ontology_enrichment_celltype=CL:0000181!2.40e-14!12;CL:0000417!2.40e-14!12;CL:0000668!2.40e-14!12;CL:0000414!2.40e-14!12;CL:0000412!2.40e-14!12;CL:0000182!2.40e-14!12 | ||
|ontology_enrichment_celltype_v019=CL:0000182;5.68e-22;12 | |ontology_enrichment_celltype_v019=CL:0000182;5.68e-22;12 | ||
|ontology_enrichment_celltype_v019_2=CL:0000182,5.89e-22,12 | |||
|ontology_enrichment_development_v019=UBERON:0004161;2.68e-11;11!UBERON:0009497;1.04e-09;13 | |ontology_enrichment_development_v019=UBERON:0004161;2.68e-11;11!UBERON:0009497;1.04e-09;13 | ||
|ontology_enrichment_disease=DOID:3493!3.58e-10!2 | |ontology_enrichment_disease=DOID:3493!3.58e-10!2 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!4.86e-24!19;UBERON:0006925!4.86e-24!19;UBERON:0008836!4.86e-24!19;UBERON:0008835!8.62e-21!22;UBERON:0003894!8.62e-21!22;UBERON:0009854!6.78e-20!23;UBERON:0007029!3.25e-19!1;UBERON:0007499!2.56e-18!25;UBERON:0009497!2.56e-18!25;UBERON:0000015!2.56e-18!25;UBERON:0002423!2.56e-18!25;UBERON:0006235!2.56e-18!25;UBERON:0004161!2.56e-18!25;UBERON:0005057!1.28e-17!26;UBERON:0009856!1.28e-17!26;UBERON:0002365!8.40e-15!31;UBERON:0002330!8.40e-15!31;UBERON:0002368!4.01e-13!35;UBERON:0000949!3.18e-10!45;UBERON:0003929!1.58e-08!54;UBERON:0005172!2.26e-08!55;UBERON:0005173!2.26e-08!55;UBERON:0005911!7.85e-08!82;UBERON:0002530!8.35e-08!59;UBERON:0002417!1.50e-07!61;UBERON:0000916!1.50e-07!61 | |ontology_enrichment_uberon=UBERON:0002107!4.86e-24!19;UBERON:0006925!4.86e-24!19;UBERON:0008836!4.86e-24!19;UBERON:0008835!8.62e-21!22;UBERON:0003894!8.62e-21!22;UBERON:0009854!6.78e-20!23;UBERON:0007029!3.25e-19!1;UBERON:0007499!2.56e-18!25;UBERON:0009497!2.56e-18!25;UBERON:0000015!2.56e-18!25;UBERON:0002423!2.56e-18!25;UBERON:0006235!2.56e-18!25;UBERON:0004161!2.56e-18!25;UBERON:0005057!1.28e-17!26;UBERON:0009856!1.28e-17!26;UBERON:0002365!8.40e-15!31;UBERON:0002330!8.40e-15!31;UBERON:0002368!4.01e-13!35;UBERON:0000949!3.18e-10!45;UBERON:0003929!1.58e-08!54;UBERON:0005172!2.26e-08!55;UBERON:0005173!2.26e-08!55;UBERON:0005911!7.85e-08!82;UBERON:0002530!8.35e-08!59;UBERON:0002417!1.50e-07!61;UBERON:0000916!1.50e-07!61 | ||
|ontology_enrichment_uberon_v019=UBERON:0002107;1.99e-37;19!UBERON:0006925;1.99e-37;19!UBERON:0002423;1.39e-28;25!UBERON:0002365;4.38e-23;31!UBERON:0002330;4.38e-23;31!UBERON:0002368;6.11e-20;33!UBERON:0000949;1.83e-14;43!UBERON:0005172;1.97e-10;52!UBERON:0005173;1.97e-10;52!UBERON:0002417;4.64e-08;58!UBERON:0000916;4.64e-08;58!UBERON:0002530;1.30e-07;57!UBERON:0001007;1.72e-07;81 | |ontology_enrichment_uberon_v019=UBERON:0002107;1.99e-37;19!UBERON:0006925;1.99e-37;19!UBERON:0002423;1.39e-28;25!UBERON:0002365;4.38e-23;31!UBERON:0002330;4.38e-23;31!UBERON:0002368;6.11e-20;33!UBERON:0000949;1.83e-14;43!UBERON:0005172;1.97e-10;52!UBERON:0005173;1.97e-10;52!UBERON:0002417;4.64e-08;58!UBERON:0000916;4.64e-08;58!UBERON:0002530;1.30e-07;57!UBERON:0001007;1.72e-07;81 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,2.06e-37,19;UBERON:0006925,2.06e-37,19;UBERON:0008836,2.06e-37,19;UBERON:0008835,2.17e-32,22;UBERON:0003894,2.17e-32,22;UBERON:0009854,5.24e-31,23;UBERON:0007499,1.43e-28,25;UBERON:0009497,1.43e-28,25;UBERON:0000015,1.43e-28,25;UBERON:0002423,1.43e-28,25;UBERON:0006235,1.43e-28,25;UBERON:0004161,1.43e-28,25;UBERON:0009856,1.71e-27,26;UBERON:0002365,3.84e-23,31;UBERON:0002330,3.84e-23,31;UBERON:0002368,1.49e-20,35;UBERON:0000949,4.39e-16,45;UBERON:0003929,1.81e-13,54;UBERON:0005172,1.81e-13,54;UBERON:0005173,1.81e-13,54;UBERON:0002530,2.34e-12,59;UBERON:0002417,3.71e-12,60;UBERON:0000916,3.71e-12,60;UBERON:0005911,5.61e-09,82;UBERON:0001041,1.78e-08,87;UBERON:0005177,2.47e-07,101 | |||
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|short_description=p2@SLCO1B1 | |short_description=p2@SLCO1B1 | ||
}} | }} |
Latest revision as of 19:16, 17 September 2015
Short description: | p2@SLCO1B1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_SLCO1B1_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | -13bp_to_NM_006446, uc001req.3_5end |
EntrezGene: | SLCO1B1 |
HGNC: | 10959 |
UniProt: | Q05CV5Q9Y6L6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 5.89e-22 | 12 |
Ontology term | p-value | n |
---|---|---|
liver | 2.06e-37 | 19 |
digestive gland | 2.06e-37 | 19 |
liver bud | 2.06e-37 | 19 |
hepatic diverticulum | 2.17e-32 | 22 |
liver primordium | 2.17e-32 | 22 |
digestive tract diverticulum | 5.24e-31 | 23 |
epithelial sac | 1.43e-28 | 25 |
epithelium of foregut-midgut junction | 1.43e-28 | 25 |
anatomical boundary | 1.43e-28 | 25 |
hepatobiliary system | 1.43e-28 | 25 |
foregut-midgut junction | 1.43e-28 | 25 |
septum transversum | 1.43e-28 | 25 |
sac | 1.71e-27 | 26 |
exocrine gland | 3.84e-23 | 31 |
exocrine system | 3.84e-23 | 31 |
endocrine gland | 1.49e-20 | 35 |
endocrine system | 4.39e-16 | 45 |
gut epithelium | 1.81e-13 | 54 |
abdomen element | 1.81e-13 | 54 |
abdominal segment element | 1.81e-13 | 54 |
gland | 2.34e-12 | 59 |
abdominal segment of trunk | 3.71e-12 | 60 |
abdomen | 3.71e-12 | 60 |
endo-epithelium | 5.61e-09 | 82 |
foregut | 1.78e-08 | 87 |
trunk region element | 2.47e-07 | 101 |