FFCP PHASE1:Hg19::chr8:47529241..47529249,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr8:47529241..47529249,- | |||
|coexpression_cluster_id=C4758 | |coexpression_cluster_id=C4758 | ||
|description=CAGE_peak_at_chr8:47529241..47529249,- | |description=CAGE_peak_at_chr8:47529241..47529249,- | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000039!8.55e-13!7;CL:0000586!8.55e-13!7;CL:0002579!4.88e-10!3 | |ontology_enrichment_celltype=CL:0000039!8.55e-13!7;CL:0000586!8.55e-13!7;CL:0002579!4.88e-10!3 | ||
|ontology_enrichment_celltype_v019=CL:0000039;9.18e-16;7!CL:0000586;9.18e-16;7!CL:1000415;3.92e-07;2 | |ontology_enrichment_celltype_v019=CL:0000039;9.18e-16;7!CL:0000586;9.18e-16;7!CL:1000415;3.92e-07;2 | ||
|ontology_enrichment_celltype_v019_2=CL:0000039,1.07e-15,7;CL:0000586,1.07e-15,7;CL:1000415,5.28e-07,2 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:162!1.06e-17!235;DOID:14566!4.10e-17!239;DOID:0050687!3.33e-15!143;DOID:3095!3.73e-14!22;DOID:2994!3.73e-14!22;DOID:1036!1.75e-10!8;DOID:305!5.05e-09!106;DOID:5409!8.60e-09!4;DOID:1909!6.64e-08!2;DOID:4468!7.88e-08!2 | |ontology_enrichment_disease=DOID:162!1.06e-17!235;DOID:14566!4.10e-17!239;DOID:0050687!3.33e-15!143;DOID:3095!3.73e-14!22;DOID:2994!3.73e-14!22;DOID:1036!1.75e-10!8;DOID:305!5.05e-09!106;DOID:5409!8.60e-09!4;DOID:1909!6.64e-08!2;DOID:4468!7.88e-08!2 | ||
|ontology_enrichment_disease_v019=DOID:3095;2.17e-13;22!DOID:2994;2.17e-13;22!DOID:0050619;2.18e-13;1!DOID:1357;2.18e-13;1!DOID:4960;5.37e-13;1!DOID:0070004;5.37e-13;1!DOID:5409;1.31e-12;4!DOID:1325;1.38e-07;7!DOID:3904;1.38e-07;7!DOID:0050615;3.46e-07;16!DOID:1036;9.65e-07;8 | |ontology_enrichment_disease_v019=DOID:3095;2.17e-13;22!DOID:2994;2.17e-13;22!DOID:0050619;2.18e-13;1!DOID:1357;2.18e-13;1!DOID:4960;5.37e-13;1!DOID:0070004;5.37e-13;1!DOID:5409;1.31e-12;4!DOID:1325;1.38e-07;7!DOID:3904;1.38e-07;7!DOID:0050615;3.46e-07;16!DOID:1036;9.65e-07;8 | ||
|ontology_enrichment_disease_v019_2=DOID:3095,2.29e-13,22;DOID:2994,2.29e-13,22;DOID:0050619,2.32e-13,1;DOID:1357,2.32e-13,1;DOID:4960,3.76e-13,1;DOID:0070004,3.76e-13,1;DOID:5409,7.70e-13,4;DOID:162,9.56e-11,235;DOID:14566,1.77e-10,239;DOID:0050687,3.32e-10,143;DOID:305,7.82e-08,106;DOID:1325,1.02e-07,7;DOID:3904,1.02e-07,7;DOID:0050615,2.88e-07,16 | |||
|ontology_enrichment_uberon=UBERON:0003688!1.66e-08!6;UBERON:0002358!1.66e-08!6;UBERON:0003684!1.66e-08!6;UBERON:0001178!1.66e-08!6;UBERON:0000013!5.98e-07!5;UBERON:0002410!5.98e-07!5 | |ontology_enrichment_uberon=UBERON:0003688!1.66e-08!6;UBERON:0002358!1.66e-08!6;UBERON:0003684!1.66e-08!6;UBERON:0001178!1.66e-08!6;UBERON:0000013!5.98e-07!5;UBERON:0002410!5.98e-07!5 | ||
|ontology_enrichment_uberon_v019=UBERON:0001764;2.18e-13;1!UBERON:0001825;2.18e-13;1!UBERON:0001282;5.37e-13;1!UBERON:0009842;5.37e-13;1!UBERON:0003704;5.37e-13;1!UBERON:0001171;5.37e-13;1!UBERON:0001172;5.37e-13;1!UBERON:0002294;1.38e-07;7!UBERON:0001173;1.38e-07;7!UBERON:0000473;9.65e-07;8 | |ontology_enrichment_uberon_v019=UBERON:0001764;2.18e-13;1!UBERON:0001825;2.18e-13;1!UBERON:0001282;5.37e-13;1!UBERON:0009842;5.37e-13;1!UBERON:0003704;5.37e-13;1!UBERON:0001171;5.37e-13;1!UBERON:0001172;5.37e-13;1!UBERON:0002294;1.38e-07;7!UBERON:0001173;1.38e-07;7!UBERON:0000473;9.65e-07;8 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001764,2.32e-13,1;UBERON:0001825,2.32e-13,1;UBERON:0001282,2.62e-13,1;UBERON:0009842,2.62e-13,1;UBERON:0003704,2.62e-13,1;UBERON:0001171,2.62e-13,1;UBERON:0001172,2.62e-13,1 | |||
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|phase1_expression=0,0.214100523890983,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300091096084402,0,0,0.18611685633159,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.767309866440312,0,0.128139149255701,0.511707249066704,0.160853921143607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.457847324091717,0.41254749960294,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.282810863907425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270455678475983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.520855522170466,0,0,0,0,0,0,0.291604613383254,0,0,0,0,0,0,0,0,0,0,1.93701494939902,3.22789466143284,0,0.869178975376065,0,0.0915975934018623,0,0,0,0,0.225595660617181,0.392125068635479,0.503464760927528,1.13852239634511,0,0.421996129056054,0.979396848954886,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.56148591426813,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12222348352147,0,1.19885765749278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.39557285273876,0,0.113312091520126,0,0,0,0,0,0,0,0,0,0,0.197611631897944,0,0,0,0.2506898940227,0,0,2.51286554000375,0,0,0,0,0,0,0,0,0.606596470166591,0.856396000634902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.643324774124777,0.260994291965212,0,0,0.97894681802587,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.54993481694734,0,0,0,0,4.47630299562781,0.431299245586727,0,0.982886743728125,0,0,1.36329340684902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11796972334774,0,0,0.381382095467167,0,0.795664888465099,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.559277158988962,0,0,0,0.102662806856247,0,0,0.701818390386317,0,1.78380136166353,0,0.769583617218004,1.66059127923341,0,0,0,0,0,0,0,0,0.169927114687817,0,0,0,0.535661815816973,1.05868461514708,0,0,0,0,0,0,0,0,0,0,0,0,0.218531143927391,0,1.32585478664576,0.801652215796681,0,1.25353769646188,0,0,0,0,0,0,0,0,1.34558235096736,0,0,0,0,0,0,0,0,0.213454691755431,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr8:47529241..47529249,- | |short_description=p@chr8:47529241..47529249,- | ||
}} | }} |
Latest revision as of 18:38, 31 July 2015
Short description: | p@chr8:47529241..47529249, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr8:47529241..47529249, - |
Coexpression cluster: | C4758_small_neuroblastoma_testicular_endometrial_maxillary_choriocarcinoma_cholangiocellular |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 1.07e-15 | 7 |
germ cell | 1.07e-15 | 7 |
epithelial cell of gall bladder | 5.28e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
maxillary sinus | 2.32e-13 | 1 |
paranasal sinus | 2.32e-13 | 1 |
intralobular bile duct | 2.62e-13 | 1 |
acinus | 2.62e-13 | 1 |
intrahepatic bile duct | 2.62e-13 | 1 |
portal lobule | 2.62e-13 | 1 |
hepatic acinus | 2.62e-13 | 1 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 2.29e-13 | 22 |
germ cell cancer | 2.29e-13 | 22 |
paranasal sinus cancer | 2.32e-13 | 1 |
maxillary sinus cancer | 2.32e-13 | 1 |
bone marrow cancer | 3.76e-13 | 1 |
myeloma | 3.76e-13 | 1 |
lung small cell carcinoma | 7.70e-13 | 4 |
cancer | 9.56e-11 | 235 |
disease of cellular proliferation | 1.77e-10 | 239 |
cell type cancer | 3.32e-10 | 143 |
carcinoma | 7.82e-08 | 106 |
bronchus cancer | 1.02e-07 | 7 |
bronchogenic carcinoma | 1.02e-07 | 7 |
respiratory system cancer | 2.88e-07 | 16 |