FFCP PHASE1:Hg19::chr20:388000..388011,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr20:388000..388011,+
|short_description=p9@RBCK1
|description=CAGE_peak_9_at_RBCK1_5end
|association_with_transcript=-130bp_to_ENST00000411647_5end
|EntrezGe...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=10616 | |EntrezGene=10616 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15864 | |HGNC=15864 | ||
|TSSclassifier=strong | |||
|UniProt=Q5JWR1 | |UniProt=Q5JWR1 | ||
|association_with_transcript=-130bp_to_ENST00000411647_5end | |||
|cluster_id=chr20:388000..388011,+ | |||
|description=CAGE_peak_9_at_RBCK1_5end | |||
|id=chr20:388000..388011,+ | |||
|ontology_enrichment_celltype=CL:0000066!7.58e-09!254;CL:0000223!9.94e-09!59;CL:0002178!1.14e-08!3 | |||
|ontology_enrichment_celltype_v019=CL:0002178;2.18e-38;3!CL:0002076;7.50e-07;42 | |||
|ontology_enrichment_celltype_v019_2=CL:0002178,2.18e-38,3;CL:0002076,9.42e-07,42 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:0050687!4.60e-12!143;DOID:305!2.54e-11!106;DOID:162!4.75e-07!235 | |||
|ontology_enrichment_disease_v019=DOID:3119;7.54e-19;14!DOID:299;1.50e-18;25!DOID:3493;1.91e-15;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3119,8.27e-19,14;DOID:299,1.50e-18,25;DOID:3493,1.33e-15,2;DOID:305,7.30e-10,106;DOID:0050687,2.39e-07,143 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0000945;1.61e-23;5!UBERON:0010039;1.61e-23;5!UBERON:0005409;8.88e-12;22!UBERON:0001041;4.56e-09;14!UBERON:0001052;2.18e-08;4!UBERON:0004907;5.86e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000945,4.07e-15,8;UBERON:0010039,4.07e-15,8;UBERON:0005409,1.76e-10,25;UBERON:0001052,2.43e-08,4;UBERON:0004907,6.39e-07,5 | |||
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|short_description=p9@RBCK1 | |||
}} | }} |
Latest revision as of 04:50, 16 September 2015
Short description: | p9@RBCK1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_RBCK1_5end |
Coexpression cluster: | NA |
Association with transcript: | -130bp_to_ENST00000411647_5end |
EntrezGene: | RBCK1 |
HGNC: | 15864 |
UniProt: | Q5JWR1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of stomach | 2.18e-38 | 3 |
endo-epithelial cell | 9.42e-07 | 42 |
Ontology term | p-value | n |
---|---|---|
stomach | 4.07e-15 | 8 |
food storage organ | 4.07e-15 | 8 |
gastrointestinal system | 1.76e-10 | 25 |
rectum | 2.43e-08 | 4 |
lower digestive tract | 6.39e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
gastrointestinal system cancer | 8.27e-19 | 14 |
adenocarcinoma | 1.50e-18 | 25 |
signet ring cell adenocarcinoma | 1.33e-15 | 2 |
carcinoma | 7.30e-10 | 106 |
cell type cancer | 2.39e-07 | 143 |