FFCP PHASE1:Hg19::chr3:16555127..16555145,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23180 | |EntrezGene=23180 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30278 | |HGNC=30278 | ||
|TSSclassifier=strong | |||
|UniProt=Q14699 | |UniProt=Q14699 | ||
|association_with_transcript=67bp_to_ENST00000334133_5end | |association_with_transcript=67bp_to_ENST00000334133_5end | ||
|cluster_id=chr3:16555127..16555145,- | |||
|description=CAGE_peak_4_at_RFTN1_5end | |description=CAGE_peak_4_at_RFTN1_5end | ||
|id=chr3:16555127..16555145,- | |id=chr3:16555127..16555145,- | ||
|ontology_enrichment_celltype=CL:0000048!1.86e-19!430;CL:0000723!3.71e-18!436;CL:0000034!3.69e-17!444;CL:0000134!6.09e-15!358;CL:0002320!1.04e-14!365;CL:0002371!2.53e-11!591;CL:0000219!8.26e-11!390;CL:0000144!5.35e-10!625;CL:0000057!6.54e-09!75;CL:0000136!4.38e-08!15;CL:0000055!2.77e-07!180 | |ontology_enrichment_celltype=CL:0000048!1.86e-19!430;CL:0000723!3.71e-18!436;CL:0000034!3.69e-17!444;CL:0000134!6.09e-15!358;CL:0002320!1.04e-14!365;CL:0002371!2.53e-11!591;CL:0000219!8.26e-11!390;CL:0000144!5.35e-10!625;CL:0000057!6.54e-09!75;CL:0000136!4.38e-08!15;CL:0000055!2.77e-07!180 | ||
|ontology_enrichment_celltype_v019=CL:0000136;2.02e-08;13 | |ontology_enrichment_celltype_v019=CL:0000136;2.02e-08;13 | ||
|ontology_enrichment_celltype_v019_2=CL:0000048,8.71e-20,427;CL:0000723,1.69e-18,433;CL:0000034,7.05e-18,441;CL:0000134,2.66e-16,354;CL:0002320,6.03e-16,361;CL:0000219,1.14e-12,386;CL:0000057,3.32e-09,76;CL:0000136,1.04e-08,15 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002384!1.09e-12!375;UBERON:0003081!6.56e-09!216;UBERON:0004535!9.20e-08!110;UBERON:0001009!1.04e-07!113;UBERON:0002049!3.50e-07!79;UBERON:0007798!3.50e-07!79;UBERON:0000479!7.66e-07!787;UBERON:0000055!9.75e-07!69 | |ontology_enrichment_uberon=UBERON:0002384!1.09e-12!375;UBERON:0003081!6.56e-09!216;UBERON:0004535!9.20e-08!110;UBERON:0001009!1.04e-07!113;UBERON:0002049!3.50e-07!79;UBERON:0007798!3.50e-07!79;UBERON:0000479!7.66e-07!787;UBERON:0000055!9.75e-07!69 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,2.14e-14,371;UBERON:0003081,1.86e-08,203;UBERON:0001637,5.86e-07,42;UBERON:0003509,5.86e-07,42;UBERON:0004572,5.86e-07,42;UBERON:0000479,7.39e-07,773 | |||
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| ||
|short_description=p4@RFTN1 | |short_description=p4@RFTN1 | ||
}} | }} |
Latest revision as of 13:11, 16 September 2015
Short description: | p4@RFTN1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_RFTN1_5end |
Coexpression cluster: | NA |
Association with transcript: | 67bp_to_ENST00000334133_5end |
EntrezGene: | RFTN1 |
HGNC: | 30278 |
UniProt: | Q14699 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
multi fate stem cell | 8.71e-20 | 427 |
somatic stem cell | 1.69e-18 | 433 |
stem cell | 7.05e-18 | 441 |
mesenchymal cell | 2.66e-16 | 354 |
connective tissue cell | 6.03e-16 | 361 |
motile cell | 1.14e-12 | 386 |
fibroblast | 3.32e-09 | 76 |
fat cell | 1.04e-08 | 15 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 2.14e-14 | 371 |
lateral plate mesoderm | 1.86e-08 | 203 |
artery | 5.86e-07 | 42 |
arterial blood vessel | 5.86e-07 | 42 |
arterial system | 5.86e-07 | 42 |
tissue | 7.39e-07 | 773 |