FFCP PHASE1:Hg19::chr1:155949472..155949503,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9181 | |EntrezGene=9181 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=682 | |HGNC=682 | ||
|TSSclassifier=strong | |||
|UniProt=F5H3H5 | |UniProt=F5H3H5 | ||
|association_with_transcript=-391bp_to_ENST00000543433,uc010pgt.1_5end | |association_with_transcript=-391bp_to_ENST00000543433,uc010pgt.1_5end | ||
|cluster_id=chr1:155949472..155949503,- | |||
|coexpression_cluster_id=C20 | |coexpression_cluster_id=C20 | ||
|description=CAGE_peak_18_at_ARHGEF2_5end | |description=CAGE_peak_18_at_ARHGEF2_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000945!3.13e-18!24;CL:0000826!3.13e-18!24;CL:0000236!4.83e-09!14;CL:0000542!3.30e-07!53;CL:0000051!3.30e-07!53 | |ontology_enrichment_celltype=CL:0000945!3.13e-18!24;CL:0000826!3.13e-18!24;CL:0000236!4.83e-09!14;CL:0000542!3.30e-07!53;CL:0000051!3.30e-07!53 | ||
|ontology_enrichment_celltype_v019=CL:0000945;5.92e-12;24!CL:0000236;2.01e-09;13 | |ontology_enrichment_celltype_v019=CL:0000945;5.92e-12;24!CL:0000236;2.01e-09;13 | ||
|ontology_enrichment_celltype_v019_2=CL:0000236,2.24e-12,14;CL:0000945,4.62e-12,24;CL:0000826,4.62e-12,24 | |||
|ontology_enrichment_development_v019=UBERON:0004872;1.83e-07;7!UBERON:0010227;8.80e-07;1!UBERON:0004140;8.80e-07;1 | |ontology_enrichment_development_v019=UBERON:0004872;1.83e-07;7!UBERON:0010227;8.80e-07;1!UBERON:0004140;8.80e-07;1 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:1287;2.44e-12;4!DOID:114;7.94e-12;2 | |ontology_enrichment_disease_v019=DOID:1287;2.44e-12;4!DOID:114;7.94e-12;2 | ||
|ontology_enrichment_disease_v019_2=DOID:1287,2.63e-12,4;DOID:114,8.61e-12,2 | |||
|ontology_enrichment_uberon=UBERON:0007023!8.54e-14!115 | |ontology_enrichment_uberon=UBERON:0007023!8.54e-14!115 | ||
|ontology_enrichment_uberon_v019=UBERON:0007100;2.75e-12;25!UBERON:0000341;5.53e-11;2!UBERON:0004151;5.25e-08;3!UBERON:0003978;9.54e-08;3!UBERON:0000946;9.54e-08;3!UBERON:0002079;8.80e-07;1 | |ontology_enrichment_uberon_v019=UBERON:0007100;2.75e-12;25!UBERON:0000341;5.53e-11;2!UBERON:0004151;5.25e-08;3!UBERON:0003978;9.54e-08;3!UBERON:0000946;9.54e-08;3!UBERON:0002079;8.80e-07;1 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0007100,2.62e-11,27;UBERON:0000341,6.78e-11,2;UBERON:0004151,5.17e-08,3;UBERON:0003978,8.34e-08,3;UBERON:0009751,8.34e-08,3;UBERON:0000946,8.34e-08,3;UBERON:0002523,8.34e-08,3;UBERON:0005983,8.34e-08,3;UBERON:0002165,8.34e-08,3;UBERON:0002062,8.34e-08,3;UBERON:0007280,8.34e-08,3;UBERON:0002079,9.81e-07,1 | |||
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|phase1_expression=0,0.642301571672949,0.422863212287913,0,0.446961094427288,0,0,0,0.261185628199839,0,0,0.218441372130172,0,0.123766352960047,0,0,0,0,0,0,0,0,0,0,0,0.764134057479513,0.985207073399349,0.708397031823113,0,0,0,0,0,0,1.16200800870452,0.568676929949686,0,0,0.200544447470142,0,0,0.32389366601898,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251248665256743,0,0,0,0,0,0,0,0,0,0,0,0,0.19891667719909,0,3.51992488922645,2.18455444504853,1.77901850772711,0.426730222566507,0.400395987036012,0.574752439954483,1.98313461835459,1.90810750907073,0,0,0.382273228125229,0,0,0,0.196709770113833,0,0,0,0,0,0,0,0,0,0,0.128091319725675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.795285947051099,0,0,0,0,0.327447688744282,0,0,0,0,0,0,0.571994910780128,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.397227542439656,0,0,0,0,0,0,0,0.163461903113459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300476117813194,0.113432183160021,0,0.213557388818567,0.211931901159562,0.300091096084402,0.103052529238439,0,0.37223371266318,0.675105328965065,0,0.252433774244115,0.0920498986422993,0,0.355009592516614,0.403008392910561,0,0,0,0,0,0.132529768321485,0,0,0,0,0,0.643240938192885,1.38134921352481,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0.702012795417713,0.445893486866185,0,0,0,0,0,0,0,0.176096868026452,0.414656231081544,0.144119953416961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26593811658487,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0.502257091432126,0,0.239624855491583,0,0,0,0,0,0,0,0.215627574859517,0.128343036279748,0,0,0,0,0,0,0,0,0,0,0,0.207970861530807,0.356857977594324,0.473107245101804,0,0,0,1.03473071292505,0,0,0.0868836144680828,0,1.02943027143257,0.413536052245775,0.215714200818617,0,0,0,0,0.248107807818777,0.306923946576125,0,0,0,0.160853921143607,0,0,0,0.0821271560138091,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0.183138929636687,0.165018999841176,0,0,0,0.193341436584244,0,0,0.137836572484531,0,0,0.0852266274161009,2.49289699810865,0,0,0,0,0.464845549297286,0,0,0.616067160352178,0,0,0,0,0,0,0,0.511795582622668,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0.569647187174163,0,0,0,0,0,0,0,0,2.41544127663434,0,0,0,0,0,0.211673582723883,0,0,2.73881614839831,0.156679895773023,0,0,0,0,0.425846237690326,0.343505344755765,1.22896305723383,2.46043718681657,1.83534055883099,0,0,0,0,0,0,0,0.439524537815682,0,0,0,0,0,0,0,0.140669416410513,0,0,0,5.37969568277888,0.828851746593443,0,0,0.861593638227486,0,0,0.179021174675609,0,0.295930216910801,0,0,0,0.185536196323703,0,0,0.349839999984783,0,0,0,0,0,0,0,0,0,0,0.331737779793674,0.295547618953547,0.219385397153973,0,0.139423744278603,0.153900517007594,0.113942055847001,0,0,0,0,0,0,0,0.31396051279005,0,0,0,0,0,0.158936578980379,0,0,0,0,0,0.176915129006678,0,0,0,0,0.202203398942031,4.01288823649394,0,0.364909578431332,0,0,0.394584402849391,0,0,0.063186579628488,0,0,0,0,0,0,0,0.138674673013139,0,0,0,0.17472666824203,0.859930162358083,0,0,0,0.290967049465258,0.0882561266915003,0.451961481561065,0,0,0.379864775735272,0,0.0801588202515337,0.213452994739353,0,0,0,0,1.4405479798815,0,0.235694034616795,0,0,0,0,0,0,0,0,0,1.67569440763353,4.81236890424536,0,3.39454300848285,7.72606886645828,3.57074331906996,5.57622821639828,0,0,0,0,0,0,0.677386656526276,0,0,0,0,0,0,0.77380195455795,0.182248669974074,0,0.157611414598396,0.0524545881349981,0,0,0,5.00286728461357,2.64836788146173,0,0,0.864221491201268,0.326587360109409,0,0,0,0,0,0,0,0,0,0,0,0.157204305099666,0,0,2.37133958277533,0.121792598380896,0.638341257770182,0.544017803369474,0.5013797880454,0.306345576763462,0.655745261419609,0,0,0,0.3755727921195,0,0,0,0,0,0.303298235083296,0,0,0,0,0,0,0,0.378806010550178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168942440653073,0,0.345430341731199,0,0.138258436151731,0,0,0,0,0,0,0,1.38699248602383,1.89436477626897,0.567515953566836,0,0,0,0,0,0,0,0,0,0,0,0,0,1.60114149657094,0,0,0.256916900385838,0,0.319267718114302,0.82046545696302,0,0.691572524642179,0,0,0.0981477185010256,0,0,0,0.381382095467167,0,0.198916222116275,0.150420656698515,0,0,0,0,0,0.202612753855184,0,0.206686796501184,0.126831620387814,0,0,2.48105589194647,0,0,0,0,0,0,0.0887023701626388,1.38280785066935,0,0.0679697329768317,0.591954962065642,0,0,0.156986185701028,0,0,0,0.215927591218621,0,0.643288897589907,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.64260490969995,5.799072156691,2.91426595835484,0,0,0,0,0,0,0,0,0,0,0.235676547101626,0,0,0,0,0.0939839179798536,0.128915775947154,3.69782276922237,0,0,0.0802413666891683,0,0,0,0,0.271965960763659,0,0,0.371995018166751,0,0,0,0,0,0,0,0,0,0.0757786982182394,0.267964130156178,0,0.103432995861895,1.0661699095049,2.61870874610114,0,0.0620747142958579,0.224263725161227,0,0.202117188958219,0.653150243690884,5.4757328173645,1.01028079521881,0.0717222053926763,0,0,0.106727345877715,0,0,0,0.611207220914332,0,0.665756774185513,0.201273793591026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| ||
|short_description=p18@ARHGEF2 | |short_description=p18@ARHGEF2 | ||
}} | }} |
Latest revision as of 14:04, 17 September 2015
Short description: | p18@ARHGEF2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_18_at_ARHGEF2_5end |
Coexpression cluster: | C20_heart_left_skeletal_diaphragm_tongue_umbilical_throat |
Association with transcript: | -391bp_to_ENST00000543433, uc010pgt.1_5end |
EntrezGene: | ARHGEF2 |
HGNC: | 682 |
UniProt: | F5H3H5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
B cell | 2.24e-12 | 14 |
lymphocyte of B lineage | 4.62e-12 | 24 |
pro-B cell | 4.62e-12 | 24 |
Ontology term | p-value | n |
---|---|---|
primary circulatory organ | 2.62e-11 | 27 |
throat | 6.78e-11 | 2 |
cardiac chamber | 5.17e-08 | 3 |
valve | 8.34e-08 | 3 |
cardiac mesenchyme | 8.34e-08 | 3 |
cardial valve | 8.34e-08 | 3 |
tunica intima | 8.34e-08 | 3 |
heart layer | 8.34e-08 | 3 |
endocardium | 8.34e-08 | 3 |
endocardial cushion | 8.34e-08 | 3 |
presumptive endocardium | 8.34e-08 | 3 |
left cardiac atrium | 9.81e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
cardiovascular system disease | 2.63e-12 | 4 |
heart disease | 8.61e-12 | 2 |