FFCP PHASE1:Hg19::chr9:120162674..120162685,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr9:120162674..120162685,- | |||
|coexpression_cluster_id=C86 | |coexpression_cluster_id=C86 | ||
|description=CAGE_peak_at_chr9:120162674..120162685,- | |description=CAGE_peak_at_chr9:120162674..120162685,- | ||
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|ontology_enrichment_celltype=CL:0000242!2.16e-26!2;CL:0000312!3.72e-11!5;CL:0000240!1.91e-09!6;CL:0000311!1.91e-09!6;CL:0000079!1.91e-09!6;CL:0000237!1.91e-09!6;CL:0000036!1.91e-09!6;CL:0000357!1.91e-09!6;CL:0000114!1.91e-09!6;CL:0002253!9.25e-08!2;CL:0000362!2.69e-07!8 | |ontology_enrichment_celltype=CL:0000242!2.16e-26!2;CL:0000312!3.72e-11!5;CL:0000240!1.91e-09!6;CL:0000311!1.91e-09!6;CL:0000079!1.91e-09!6;CL:0000237!1.91e-09!6;CL:0000036!1.91e-09!6;CL:0000357!1.91e-09!6;CL:0000114!1.91e-09!6;CL:0002253!9.25e-08!2;CL:0000362!2.69e-07!8 | ||
|ontology_enrichment_celltype_v019=CL:0002253;2.74e-50;2!CL:0000123;4.52e-50;2!CL:0000242;4.52e-50;2!CL:0002563;5.56e-26;4!CL:0000312;5.15e-21;5!CL:0000240;9.07e-18;6!CL:0000311;9.07e-18;6!CL:0000079;9.07e-18;6!CL:0000237;9.07e-18;6!CL:0000362;2.45e-12;9!CL:0002159;2.00e-08;14 | |ontology_enrichment_celltype_v019=CL:0002253;2.74e-50;2!CL:0000123;4.52e-50;2!CL:0000242;4.52e-50;2!CL:0002563;5.56e-26;4!CL:0000312;5.15e-21;5!CL:0000240;9.07e-18;6!CL:0000311;9.07e-18;6!CL:0000079;9.07e-18;6!CL:0000237;9.07e-18;6!CL:0000362;2.45e-12;9!CL:0002159;2.00e-08;14 | ||
|ontology_enrichment_celltype_v019_2=CL:0002253,2.74e-50,2;CL:0000242,4.52e-50,2;CL:0002563,5.56e-26,4;CL:0000312,5.15e-21,5;CL:0000240,9.07e-18,6;CL:0000311,9.07e-18,6;CL:0000079,9.07e-18,6;CL:0000237,9.07e-18,6;CL:0000036,9.07e-18,6;CL:0000357,9.07e-18,6;CL:0000114,9.07e-18,6;CL:0000362,2.45e-12,9;CL:0002159,2.00e-08,14 | |||
|ontology_enrichment_development_v019=CL:0000357;9.07e-18;6!CL:0000114;9.07e-18;6 | |ontology_enrichment_development_v019=CL:0000357;9.07e-18;6!CL:0000114;9.07e-18;6 | ||
|ontology_enrichment_disease=DOID:0050619!1.10e-13!1;DOID:1357!1.10e-13!1;DOID:5093!1.34e-13!4;DOID:1612!1.34e-13!4;DOID:5409!3.64e-13!4;DOID:1325!6.52e-08!7;DOID:3904!6.52e-08!7;DOID:0050615!1.81e-07!16 | |ontology_enrichment_disease=DOID:0050619!1.10e-13!1;DOID:1357!1.10e-13!1;DOID:5093!1.34e-13!4;DOID:1612!1.34e-13!4;DOID:5409!3.64e-13!4;DOID:1325!6.52e-08!7;DOID:3904!6.52e-08!7;DOID:0050615!1.81e-07!16 | ||
|ontology_enrichment_disease_v019=DOID:3119;1.86e-08;14 | |ontology_enrichment_disease_v019=DOID:3119;1.86e-08;14 | ||
|ontology_enrichment_disease_v019_2=DOID:3119,1.86e-08,14 | |||
|ontology_enrichment_uberon=UBERON:0001829!3.16e-26!2;UBERON:0001831!4.53e-14!1;UBERON:0001567!4.53e-14!1;UBERON:0008801!4.53e-14!1;UBERON:0001736!5.85e-14!1;UBERON:0006298!5.85e-14!1;UBERON:0001764!1.10e-13!1;UBERON:0001825!1.10e-13!1;UBERON:0001044!2.16e-09!6;UBERON:0003293!2.16e-09!6;UBERON:0003294!2.16e-09!6;UBERON:0010047!2.16e-09!6;UBERON:0000167!2.16e-09!6;UBERON:0004089!1.12e-07!2;UBERON:0000473!3.90e-07!8 | |ontology_enrichment_uberon=UBERON:0001829!3.16e-26!2;UBERON:0001831!4.53e-14!1;UBERON:0001567!4.53e-14!1;UBERON:0008801!4.53e-14!1;UBERON:0001736!5.85e-14!1;UBERON:0006298!5.85e-14!1;UBERON:0001764!1.10e-13!1;UBERON:0001825!1.10e-13!1;UBERON:0001044!2.16e-09!6;UBERON:0003293!2.16e-09!6;UBERON:0003294!2.16e-09!6;UBERON:0010047!2.16e-09!6;UBERON:0000167!2.16e-09!6;UBERON:0004089!1.12e-07!2;UBERON:0000473!3.90e-07!8 | ||
|ontology_enrichment_uberon_v019=UBERON:0001052;5.56e-26;4!UBERON:0001242;5.56e-26;4!UBERON:0001262;5.56e-26;4!UBERON:0004786;5.56e-26;4!UBERON:0004808;5.56e-26;4!UBERON:0001277;5.56e-26;4!UBERON:0004907;4.21e-21;5!UBERON:0000485;1.65e-15;7!UBERON:0003929;1.65e-15;7!UBERON:0003350;9.39e-14;8!UBERON:0001155;2.19e-12;9!UBERON:0000059;2.16e-10;11!UBERON:0001003;5.93e-08;15!UBERON:0007376;5.93e-08;15!UBERON:0000160;7.18e-07;17 | |ontology_enrichment_uberon_v019=UBERON:0001052;5.56e-26;4!UBERON:0001242;5.56e-26;4!UBERON:0001262;5.56e-26;4!UBERON:0004786;5.56e-26;4!UBERON:0004808;5.56e-26;4!UBERON:0001277;5.56e-26;4!UBERON:0004907;4.21e-21;5!UBERON:0000485;1.65e-15;7!UBERON:0003929;1.65e-15;7!UBERON:0003350;9.39e-14;8!UBERON:0001155;2.19e-12;9!UBERON:0000059;2.16e-10;11!UBERON:0001003;5.93e-08;15!UBERON:0007376;5.93e-08;15!UBERON:0000160;7.18e-07;17 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001052,5.56e-26,4;UBERON:0001242,5.56e-26,4;UBERON:0001262,5.56e-26,4;UBERON:0004786,5.56e-26,4;UBERON:0004808,5.56e-26,4;UBERON:0001277,5.56e-26,4;UBERON:0004907,4.21e-21,5;UBERON:0003350,9.39e-14,8;UBERON:0001155,2.19e-12,9;UBERON:0000485,2.19e-12,9;UBERON:0000059,2.16e-10,11;UBERON:0001003,5.93e-08,15;UBERON:0007376,5.93e-08,15;UBERON:0007383,5.93e-08,15;UBERON:0000160,7.18e-07,17 | |||
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|short_description=p@chr9:120162674..120162685,- | |short_description=p@chr9:120162674..120162685,- | ||
}} | }} |
Latest revision as of 22:14, 31 July 2015
Short description: | p@chr9:120162674..120162685, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr9:120162674..120162685, - |
Coexpression cluster: | C86_colon_carcinoid_small_neuroectodermal_giant_large_neuroepithelioma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of large intestine | 2.74e-50 | 2 |
Merkel cell | 4.52e-50 | 2 |
intestinal epithelial cell | 5.56e-26 | 4 |
keratinocyte | 5.15e-21 | 5 |
stratified squamous epithelial cell | 9.07e-18 | 6 |
keratin accumulating cell | 9.07e-18 | 6 |
stratified epithelial cell | 9.07e-18 | 6 |
keratinizing barrier epithelial cell | 9.07e-18 | 6 |
epithelial fate stem cell | 9.07e-18 | 6 |
stratified epithelial stem cell | 9.07e-18 | 6 |
surface ectodermal cell | 9.07e-18 | 6 |
epidermal cell | 2.45e-12 | 9 |
general ecto-epithelial cell | 2.00e-08 | 14 |
Ontology term | p-value | n |
---|---|---|
rectum | 5.56e-26 | 4 |
intestinal mucosa | 5.56e-26 | 4 |
wall of intestine | 5.56e-26 | 4 |
gastrointestinal system mucosa | 5.56e-26 | 4 |
gastrointestinal system epithelium | 5.56e-26 | 4 |
intestinal epithelium | 5.56e-26 | 4 |
lower digestive tract | 4.21e-21 | 5 |
epithelium of mucosa | 9.39e-14 | 8 |
colon | 2.19e-12 | 9 |
simple columnar epithelium | 2.19e-12 | 9 |
large intestine | 2.16e-10 | 11 |
skin epidermis | 5.93e-08 | 15 |
outer epithelium | 5.93e-08 | 15 |
enveloping layer of ectoderm | 5.93e-08 | 15 |
intestine | 7.18e-07 | 17 |
Ontology term | p-value | n |
---|---|---|
gastrointestinal system cancer | 1.86e-08 | 14 |