FFCP PHASE1:Hg19::chr9:95298946..95298962,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1842 | |EntrezGene=1842 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3154 | |HGNC=3154 | ||
|TSSclassifier=strong | |||
|UniProt=Q5T9F4 | |UniProt=Q5T9F4 | ||
|association_with_transcript=-9bp_to_ENST00000395534_5end | |association_with_transcript=-9bp_to_ENST00000395534_5end | ||
|cluster_id=chr9:95298946..95298962,- | |||
|coexpression_cluster_id=C29 | |coexpression_cluster_id=C29 | ||
|description=CAGE_peak_6_at_ECM2_5end | |description=CAGE_peak_6_at_ECM2_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000136!1.31e-10!15 | |ontology_enrichment_celltype=CL:0000136!1.31e-10!15 | ||
|ontology_enrichment_celltype_v019=CL:0000136;1.09e-14;13!CL:0000511;7.18e-07;1!CL:0002625;7.18e-07;1!CL:0000216;7.18e-07;1 | |ontology_enrichment_celltype_v019=CL:0000136;1.09e-14;13!CL:0000511;7.18e-07;1!CL:0002625;7.18e-07;1!CL:0000216;7.18e-07;1 | ||
|ontology_enrichment_celltype_v019_2=CL:0000136,1.38e-12,15;CL:0000511,7.19e-07,1;CL:0002625,7.19e-07,1;CL:0000216,7.19e-07,1 | |||
|ontology_enrichment_development_v019=UBERON:0007297;2.00e-11;2!UBERON:0006603;1.65e-08;65 | |ontology_enrichment_development_v019=UBERON:0007297;2.00e-11;2!UBERON:0006603;1.65e-08;65 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.08e-37!115;UBERON:0005904!3.32e-07!4;UBERON:0001049!4.45e-07!57;UBERON:0005068!4.45e-07!57;UBERON:0006241!4.45e-07!57;UBERON:0007135!4.45e-07!57 | |ontology_enrichment_uberon=UBERON:0007023!1.08e-37!115;UBERON:0005904!3.32e-07!4;UBERON:0001049!4.45e-07!57;UBERON:0005068!4.45e-07!57;UBERON:0006241!4.45e-07!57;UBERON:0007135!4.45e-07!57 | ||
|ontology_enrichment_uberon_v019=UBERON:0005904;2.80e-21;4!UBERON:0006947;3.95e-16;3!UBERON:0004054;3.95e-16;3!UBERON:0003135;7.86e-12;11!UBERON:0002081;2.00e-11;2!UBERON:0002133;3.77e-11;2!UBERON:0000058;1.34e-08;10!UBERON:0003101;4.09e-08;22!UBERON:0000079;4.09e-08;22!UBERON:0004151;6.71e-08;3!UBERON:0003978;1.02e-07;3!UBERON:0000946;1.02e-07;3!UBERON:0002107;4.51e-07;19!UBERON:0006925;4.51e-07;19!UBERON:0001136;7.18e-07;1!UBERON:0001343;7.18e-07;1!UBERON:0004910;7.18e-07;1!UBERON:0004813;7.18e-07;1 | |ontology_enrichment_uberon_v019=UBERON:0005904;2.80e-21;4!UBERON:0006947;3.95e-16;3!UBERON:0004054;3.95e-16;3!UBERON:0003135;7.86e-12;11!UBERON:0002081;2.00e-11;2!UBERON:0002133;3.77e-11;2!UBERON:0000058;1.34e-08;10!UBERON:0003101;4.09e-08;22!UBERON:0000079;4.09e-08;22!UBERON:0004151;6.71e-08;3!UBERON:0003978;1.02e-07;3!UBERON:0000946;1.02e-07;3!UBERON:0002107;4.51e-07;19!UBERON:0006925;4.51e-07;19!UBERON:0001136;7.18e-07;1!UBERON:0001343;7.18e-07;1!UBERON:0004910;7.18e-07;1!UBERON:0004813;7.18e-07;1 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0005904,1.65e-21,4;UBERON:0006947,2.34e-16,3;UBERON:0004054,2.34e-16,3;UBERON:0003135,5.95e-12,11;UBERON:0002081,2.11e-11,2;UBERON:0010227,2.11e-11,2;UBERON:0002133,3.58e-11,2;UBERON:0007023,6.97e-11,114;UBERON:0003101,3.35e-08,22;UBERON:0000079,3.35e-08,22;UBERON:0004151,6.96e-08,3;UBERON:0003978,9.85e-08,3;UBERON:0009751,9.85e-08,3;UBERON:0000946,9.85e-08,3;UBERON:0002523,9.85e-08,3;UBERON:0005983,9.85e-08,3;UBERON:0002165,9.85e-08,3;UBERON:0002062,9.85e-08,3;UBERON:0007280,9.85e-08,3;UBERON:0002107,4.20e-07,19;UBERON:0006925,4.20e-07,19;UBERON:0008836,4.20e-07,19;UBERON:0001136,7.19e-07,1;UBERON:0001343,7.19e-07,1;UBERON:0004910,7.19e-07,1;UBERON:0005154,7.19e-07,1;UBERON:0005295,7.19e-07,1;UBERON:0004813,7.19e-07,1;UBERON:0005297,7.19e-07,1;UBERON:0005294,7.19e-07,1;UBERON:0010141,7.19e-07,1;UBERON:0005891,7.19e-07,1 | |||
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| ||
|short_description=p6@ECM2 | |short_description=p6@ECM2 | ||
}} | }} |
Latest revision as of 07:32, 18 September 2015
Short description: | p6@ECM2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_ECM2_5end |
Coexpression cluster: | C29_mature_adipose_Adipocyte_breast_Lymphatic_vein_heart |
Association with transcript: | -9bp_to_ENST00000395534_5end |
EntrezGene: | ECM2 |
HGNC: | 3154 |
UniProt: | Q5T9F4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 1.38e-12 | 15 |
androgen binding protein secreting cell | 7.19e-07 | 1 |
seminiferous tubule epithelial cell | 7.19e-07 | 1 |
Sertoli cell | 7.19e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
duct of male reproductive system | 1.65e-21 | 4 |
male genital duct | 2.34e-16 | 3 |
internal male genitalia | 2.34e-16 | 3 |
male reproductive organ | 5.95e-12 | 11 |
cardiac atrium | 2.11e-11 | 2 |
future cardiac atrium | 2.11e-11 | 2 |
atrioventricular valve | 3.58e-11 | 2 |
adult organism | 6.97e-11 | 114 |
male organism | 3.35e-08 | 22 |
male reproductive system | 3.35e-08 | 22 |
cardiac chamber | 6.96e-08 | 3 |
valve | 9.85e-08 | 3 |
cardiac mesenchyme | 9.85e-08 | 3 |
cardial valve | 9.85e-08 | 3 |
tunica intima | 9.85e-08 | 3 |
heart layer | 9.85e-08 | 3 |
endocardium | 9.85e-08 | 3 |
endocardial cushion | 9.85e-08 | 3 |
presumptive endocardium | 9.85e-08 | 3 |
liver | 4.20e-07 | 19 |
digestive gland | 4.20e-07 | 19 |
liver bud | 4.20e-07 | 19 |
mesothelium | 7.19e-07 | 1 |
seminiferous tubule of testis | 7.19e-07 | 1 |
epithelium of male gonad | 7.19e-07 | 1 |
epithelial cord | 7.19e-07 | 1 |
sex cord | 7.19e-07 | 1 |
seminiferous tubule epithelium | 7.19e-07 | 1 |
testis sex cord | 7.19e-07 | 1 |
genital ridge | 7.19e-07 | 1 |
primitive sex cord of indifferent gonad | 7.19e-07 | 1 |
coelomic epithelium | 7.19e-07 | 1 |