FFCP PHASE1:Hg19::chr19:19748353..19748362,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr19:19748353..19748362,- | |||
|coexpression_cluster_id=C49 | |coexpression_cluster_id=C49 | ||
|description=CAGE_peak_at_chr19:19748353..19748362,- | |description=CAGE_peak_at_chr19:19748353..19748362,- | ||
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|ontology_enrichment_celltype=CL:0002322!3.19e-51!5;CL:0000039!2.24e-13!7;CL:0000586!2.24e-13!7;CL:0000148!7.76e-10!10;CL:0000541!7.76e-10!10;CL:0000540!1.06e-07!6;CL:0000031!1.06e-07!6;CL:0000404!1.06e-07!6;CL:0000147!3.67e-07!14 | |ontology_enrichment_celltype=CL:0002322!3.19e-51!5;CL:0000039!2.24e-13!7;CL:0000586!2.24e-13!7;CL:0000148!7.76e-10!10;CL:0000541!7.76e-10!10;CL:0000540!1.06e-07!6;CL:0000031!1.06e-07!6;CL:0000404!1.06e-07!6;CL:0000147!3.67e-07!14 | ||
|ontology_enrichment_celltype_v019=CL:0002322;1.50e-156;5!CL:0002321;4.60e-53;15!CL:0000148;8.54e-21;10!CL:0000147;3.41e-15;14!CL:0000710;5.70e-11;20!CL:0000075;2.13e-08;27 | |ontology_enrichment_celltype_v019=CL:0002322;1.50e-156;5!CL:0002321;4.60e-53;15!CL:0000148;8.54e-21;10!CL:0000147;3.41e-15;14!CL:0000710;5.70e-11;20!CL:0000075;2.13e-08;27 | ||
|ontology_enrichment_celltype_v019_2=CL:0002322,1.50e-156,5;CL:0000148,8.54e-21,10;CL:0000541,8.54e-21,10;CL:0000147,3.41e-15,14;CL:0000710,5.70e-11,20;CL:0000075,2.14e-08,27;CL:0002077,7.16e-07,34 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002046!8.50e-09!5;UBERON:0004117!8.50e-09!5;UBERON:0007689!8.50e-09!5;UBERON:0007123!8.50e-09!5;UBERON:0003091!8.50e-09!5 | |ontology_enrichment_uberon=UBERON:0002046!8.50e-09!5;UBERON:0004117!8.50e-09!5;UBERON:0007689!8.50e-09!5;UBERON:0007123!8.50e-09!5;UBERON:0003091!8.50e-09!5 | ||
|ontology_enrichment_uberon_v019=UBERON:0000922;1.00e-10;49 | |ontology_enrichment_uberon_v019=UBERON:0000922;1.00e-10;49 | ||
|ontology_enrichment_uberon_v019_2= | |||
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|short_description=p@chr19:19748353..19748362,- | |short_description=p@chr19:19748353..19748362,- | ||
}} | }} |
Latest revision as of 05:32, 26 July 2015
Short description: | p@chr19:19748353..19748362, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:19748353..19748362, - |
Coexpression cluster: | C49_H9_iPS_testicular_HES3GFP_teratocarcinoma_hepatoblastoma_choriocarcinoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 1.50e-156 | 5 |
melanocyte | 8.54e-21 | 10 |
melanoblast | 8.54e-21 | 10 |
pigment cell | 3.41e-15 | 14 |
neurecto-epithelial cell | 5.70e-11 | 20 |
columnar/cuboidal epithelial cell | 2.14e-08 | 27 |
ecto-epithelial cell | 7.16e-07 | 34 |