FFCP PHASE1:Hg19::chr10:54075970..54075993,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:54075970..54075993,+ | |||
|description=CAGE_peak_at_chr10:54075970..54075993,+ | |description=CAGE_peak_at_chr10:54075970..54075993,+ | ||
|id=chr10:54075970..54075993,+ | |id=chr10:54075970..54075993,+ | ||
|ontology_enrichment_celltype=CL:0000548!1.18e-13!679;CL:0000004!1.18e-13!679;CL:0000255!1.18e-13!679;CL:0000012!2.70e-13!682;CL:0000076!6.05e-13!62;CL:0000066!7.84e-13!254;CL:0000220!4.23e-12!246;CL:0002321!9.04e-12!248;CL:0002620!2.20e-11!23;CL:0000055!6.71e-10!180;CL:0000222!5.41e-09!119;CL:0000003!7.37e-09!722;CL:0000057!9.26e-09!75;CL:0000071!1.19e-07!18;CL:0002546!1.19e-07!18;CL:1000413!1.92e-07!9;CL:0002139!2.35e-07!24;CL:0000213!3.13e-07!57;CL:0000215!3.13e-07!57;CL:0000063!4.80e-07!578 | |ontology_enrichment_celltype=CL:0000548!1.18e-13!679;CL:0000004!1.18e-13!679;CL:0000255!1.18e-13!679;CL:0000012!2.70e-13!682;CL:0000076!6.05e-13!62;CL:0000066!7.84e-13!254;CL:0000220!4.23e-12!246;CL:0002321!9.04e-12!248;CL:0002620!2.20e-11!23;CL:0000055!6.71e-10!180;CL:0000222!5.41e-09!119;CL:0000003!7.37e-09!722;CL:0000057!9.26e-09!75;CL:0000071!1.19e-07!18;CL:0002546!1.19e-07!18;CL:1000413!1.92e-07!9;CL:0002139!2.35e-07!24;CL:0000213!3.13e-07!57;CL:0000215!3.13e-07!57;CL:0000063!4.80e-07!578 | ||
|ontology_enrichment_celltype_v019=CL:0002620;9.02e-09;23!CL:0000515;1.07e-08;3 | |ontology_enrichment_celltype_v019=CL:0002620;9.02e-09;23!CL:0000515;1.07e-08;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0002620,9.16e-09,23;CL:0000222,4.27e-07,121 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:305!1.15e-07!106 | |ontology_enrichment_disease=DOID:305!1.15e-07!106 | ||
|ontology_enrichment_disease_v019=DOID:0060084;6.79e-09;3!DOID:127;6.79e-09;3!DOID:17;7.96e-08;5!DOID:450;7.96e-08;5!DOID:66;7.96e-08;5!DOID:423;7.96e-08;5!DOID:0080000;7.96e-08;5!DOID:11722;7.96e-08;5!DOID:0060072;9.67e-07;4 | |ontology_enrichment_disease_v019=DOID:0060084;6.79e-09;3!DOID:127;6.79e-09;3!DOID:17;7.96e-08;5!DOID:450;7.96e-08;5!DOID:66;7.96e-08;5!DOID:423;7.96e-08;5!DOID:0080000;7.96e-08;5!DOID:11722;7.96e-08;5!DOID:0060072;9.67e-07;4 | ||
|ontology_enrichment_disease_v019_2=DOID:0060084,3.52e-09,3;DOID:127,3.52e-09,3;DOID:17,8.07e-08,5;DOID:450,8.07e-08,5;DOID:66,8.07e-08,5;DOID:423,8.07e-08,5;DOID:0080000,8.07e-08,5;DOID:11722,8.07e-08,5;DOID:0060072,5.97e-07,4 | |||
|ontology_enrichment_uberon=UBERON:0000055!1.78e-08!69;UBERON:0001637!1.93e-08!42;UBERON:0003509!1.93e-08!42;UBERON:0004572!1.93e-08!42;UBERON:0001981!2.38e-08!60;UBERON:0007500!2.38e-08!60;UBERON:0004537!2.38e-08!60;UBERON:0006965!2.38e-08!60;UBERON:0003102!2.81e-08!95;UBERON:0000490!3.12e-08!138;UBERON:0002049!4.72e-08!79;UBERON:0007798!4.72e-08!79;UBERON:0001986!1.19e-07!18;UBERON:0004638!1.19e-07!18;UBERON:0004852!1.19e-07!18;UBERON:0006914!1.21e-07!25;UBERON:0003915!1.92e-07!9;UBERON:0004700!1.92e-07!9;UBERON:0001917!1.92e-07!9;UBERON:0002097!2.21e-07!40;UBERON:0000947!2.66e-07!21;UBERON:0010191!2.66e-07!21;UBERON:0000487!4.24e-07!22;UBERON:0001737!5.92e-07!9 | |ontology_enrichment_uberon=UBERON:0000055!1.78e-08!69;UBERON:0001637!1.93e-08!42;UBERON:0003509!1.93e-08!42;UBERON:0004572!1.93e-08!42;UBERON:0001981!2.38e-08!60;UBERON:0007500!2.38e-08!60;UBERON:0004537!2.38e-08!60;UBERON:0006965!2.38e-08!60;UBERON:0003102!2.81e-08!95;UBERON:0000490!3.12e-08!138;UBERON:0002049!4.72e-08!79;UBERON:0007798!4.72e-08!79;UBERON:0001986!1.19e-07!18;UBERON:0004638!1.19e-07!18;UBERON:0004852!1.19e-07!18;UBERON:0006914!1.21e-07!25;UBERON:0003915!1.92e-07!9;UBERON:0004700!1.92e-07!9;UBERON:0001917!1.92e-07!9;UBERON:0002097!2.21e-07!40;UBERON:0000947!2.66e-07!21;UBERON:0010191!2.66e-07!21;UBERON:0000487!4.24e-07!22;UBERON:0001737!5.92e-07!9 | ||
|ontology_enrichment_uberon_v019=UBERON:0010260;5.55e-09;9 | |ontology_enrichment_uberon_v019=UBERON:0010260;5.55e-09;9 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0010260,2.24e-09,9;UBERON:0007500,6.28e-07,59;UBERON:0001981,6.28e-07,59;UBERON:0004537,6.28e-07,59;UBERON:0006965,6.28e-07,59;UBERON:0001638,7.86e-07,9;UBERON:0003920,7.86e-07,9;UBERON:0004582,7.86e-07,9 | |||
|phase1_expression=1.2717486548939,0.642301571672949,0.422863212287913,1.0007329835313,0,0.872338524100369,0,0,0,0.245733936501509,0,0,0,0.247532705920093,0,0,0,0,0,0,0.204000691244253,0,0,0.136874425072884,0,0,0,0,0,0,0,1.83884244895785,0,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0.361439152384566,0.50133791063589,0.144846518960824,0,0,0.0945348171640679,0,0,0,0,0,0,0,0,0,0,0,1.78886166630035,5.16140757063675,0.694281003215189,0.56530794192401,0.419499436209906,0.275118041940067,1.04497483268405,0.516833518338658,1.06729878806013,0,0,0.760272105718513,0,1.10298924103761,0.81014194788176,1.16089646769304,0.44905874525234,0,3.06633274931766,1.89853131913626,0,0,0,0,0,0.633152558322899,2.91300197789081,0.860509862246441,0.354668382198357,0,0,0,0,0.134710672069688,0.490385709340376,0.302714855289863,0,0.234321431833797,0,0,0.149448680551801,0.352303495931295,0.323745888736263,0.280901613404497,0.204154171254893,0.245668634623536,0,0,0,0.910161361938026,0,0.168336113954066,0.375355559615893,0,0,0,0,0.567160915800105,1.25572744982203,1.92201649936711,1.05965950579781,1.20036438433761,0.412210116953756,1.03056216018252,2.60563598864226,1.35021065793013,2.82567314967476,0.757301322732344,0.552299391853796,0,0.355009592516614,1.91428986632517,2.20428770003634,0.773043412653187,1.09098448236334,0.286804595389004,0,0,0,0,0,0,0,0,1.38134921352481,0.464367928031979,0.721879481669586,0.828147600278907,0.505754070234305,1.20505514941741,1.10293972732394,0.871517776369625,0.71181185733329,0.674156540800822,0.392442930250692,0.38474715694639,0,0,0,0,0,0,0,0,0.245976877086227,0.514703430895577,0,0,0.100528972411631,0.185176890317059,1.3032332212413,0,0,0.463721619900307,0,0.288732895522148,0,0,0,0,0,0,0,0,0.16798212819886,0.283550194484773,0.626909658919938,0,1.15014803749563,0,0,0,0,0,0,0,0,0,0.205654985406647,0,0,0.224262168690721,0,0.07333828582095,5.8172272091,0,0,1.06375246633948,2.08014873822732,0,0,0.532844358032199,0.57191197463259,1.08524321078289,0,0,0,0,0,0,0,0,0,0,0.239624855491583,0,0,7.81819056004928,1.2328579353023,2.14873155887875,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0,0.207970861530807,0.892144943985809,0.315404830067869,0.234282829985426,0,0,1.03473071292505,0.664225598535437,0,1.04260337361699,0,0,0,0,0,0,0,0,1.73675465473144,0.306923946576125,0,1.40953064181271,0,0.160853921143607,0,0,0,0.328508624055237,0,0.116210378459959,0.725156697549733,0,0,0.918515585316854,1.0925470080403,0.262248829918848,0,0.0770153371044148,0,0,0.211103257785751,0,0.510281115829547,0,0,0,0,0,0,0,0,0,0,0,0.325378394664303,0,0,0.330037999682352,0,0,0,0.096670718292122,0,0,0,0,0,0,0,0.165284915360978,0,0,0.10115778085555,2.32422774648643,0.94443704049192,0,0.924100740528266,0.532306030317022,1.73986598415015,0,0.429374660225974,0,0,0.38126038784765,0.511795582622668,0,0,0,0,0,0.235624804691373,0,0,0,0,0.974853958525138,1.05650146756755,0.682499557039929,0.424216295861138,0,0,0,0,0,0,1.62328301570163,1.54911749049875,0.563391205064483,1.57752487424457,1.3754865741837,1.78335525740625,1.06428319221179,0.844430541190656,0.658589785919804,0,0,0.48111056362756,0,1.08890984861323,0.0941438007767792,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,1.28188885352968,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.606802608747567,0,0,0,0,0,0,0,0.111308705022906,0,0,0,0,0,6.74973304514222,0,1.24415835064723,0.988551862620595,0,0,0,0,0,0,0,0,0,0,0,0.341380344856499,0.254253650292766,0,0,0,0,0,0,0,0,0,0,0,2.64905114129346,0,0.113942055847001,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0.706765357169704,0,0,0,0,0,0,0,0,0,0,0,0.782658475728359,1.21390189767046,0,0,0,0,0,0,0,0.330991955875499,0.313932918407225,0,0,0.970722711091971,0,0.293977192243133,0.522355239482415,0,0,0.0967563312890851,0.0730893170861856,0.0821154570532092,0,0,0,0,0,0,0,0.0801588202515337,0,0,0,3.55063448114339,0,0.864328787928898,0.124252535565433,0,3.12579673969312,2.61507115780833,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0787831823072236,0,0.13480708770837,0.196854963029498,0,0,0,0,0,0,0,0,0,0,0,0,0.105600336519406,0,1.15149118391667,0,0,0,8.14499402630569,5.18532894720761,1.95952416065645,0,0,1.87426823963964,0,0,0,0,0,0.171086837884329,0,0,0,0,0,0,0,0.638341257770182,0,0,0,0,0,0,0,0,0,0,0,0,0.874862855734746,0.303298235083296,0,0,0,0,0.447764408660622,0,1.10961172300523,0,0,0.889811221596536,1.83072054717539,0,0,0,0.318593534327405,0,0,0.414706207840855,0.53168342911599,0,0,0.761610424337591,0.406870733204662,0,0.107410557042488,0.464033759878494,0.398095888698616,0.800055529326307,0.686791410365586,0.336749488765919,1.26184898228651,0.385239660814607,0,1.56596575179127,0.453411851024545,0.926089897295336,1.22368352253234,1.96997725189636,0,0.657852148736121,2.8270263351341,0.771656153083659,0.506827321959218,0,0.345430341731199,4.55789934266073,0,0,0,0,0,0.245772908753719,0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| ||
|short_description=p@chr10:54075970..54075993,+ | |short_description=p@chr10:54075970..54075993,+ | ||
}} | }} |
Latest revision as of 14:09, 23 July 2015
Short description: | p@chr10:54075970..54075993, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:54075970..54075993, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
skin fibroblast | 9.16e-09 | 23 |
mesodermal cell | 4.27e-07 | 121 |
Ontology term | p-value | n |
---|---|---|
umbilical blood vessel | 2.24e-09 | 9 |
epithelial tube open at both ends | 6.28e-07 | 59 |
blood vessel | 6.28e-07 | 59 |
blood vasculature | 6.28e-07 | 59 |
vascular cord | 6.28e-07 | 59 |
vein | 7.86e-07 | 9 |
venous blood vessel | 7.86e-07 | 9 |
venous system | 7.86e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
cell type benign neoplasm | 3.52e-09 | 3 |
leiomyoma | 3.52e-09 | 3 |
musculoskeletal system disease | 8.07e-08 | 5 |
myotonic disease | 8.07e-08 | 5 |
muscle tissue disease | 8.07e-08 | 5 |
myopathy | 8.07e-08 | 5 |
muscular disease | 8.07e-08 | 5 |
myotonic dystrophy | 8.07e-08 | 5 |
benign neoplasm | 5.97e-07 | 4 |