FFCP PHASE1:Hg19::chr4:18196043..18196063,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr4:18196043..18196063,+ | |||
|coexpression_cluster_id=C87 | |coexpression_cluster_id=C87 | ||
|description=CAGE_peak_at_chr4:18196043..18196063,+ | |description=CAGE_peak_at_chr4:18196043..18196063,+ | ||
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|ontology_enrichment_celltype=CL:0002166!3.24e-12!3;CL:0000306!1.44e-09!4;CL:0002222!1.44e-09!4;CL:0002224!1.44e-09!4;CL:0000243!8.55e-09!15;CL:0000125!8.55e-09!15;CL:0000030!8.55e-09!15;CL:0000339!8.55e-09!15;CL:0000095!5.73e-08!17;CL:0000123!5.73e-08!17 | |ontology_enrichment_celltype=CL:0002166!3.24e-12!3;CL:0000306!1.44e-09!4;CL:0002222!1.44e-09!4;CL:0002224!1.44e-09!4;CL:0000243!8.55e-09!15;CL:0000125!8.55e-09!15;CL:0000030!8.55e-09!15;CL:0000339!8.55e-09!15;CL:0000095!5.73e-08!17;CL:0000123!5.73e-08!17 | ||
|ontology_enrichment_celltype_v019=CL:0000243;3.38e-07;15!CL:0000125;3.38e-07;15 | |ontology_enrichment_celltype_v019=CL:0000243;3.38e-07;15!CL:0000125;3.38e-07;15 | ||
|ontology_enrichment_celltype_v019_2=CL:0000243,3.38e-07,15;CL:0000125,3.38e-07,15;CL:0000030,3.38e-07,15;CL:0000339,3.38e-07,15 | |||
|ontology_enrichment_development_v019=UBERON:0003056;4.27e-34;3!UBERON:0006238;2.16e-10;10!CL:0000339;3.38e-07;15 | |ontology_enrichment_development_v019=UBERON:0003056;4.27e-34;3!UBERON:0006238;2.16e-10;10!CL:0000339;3.38e-07;15 | ||
|ontology_enrichment_disease=DOID:3093!4.80e-12!11;DOID:5409!1.32e-09!4 | |ontology_enrichment_disease=DOID:3093!4.80e-12!11;DOID:5409!1.32e-09!4 | ||
|ontology_enrichment_disease_v019=DOID:3093;1.22e-09;11 | |ontology_enrichment_disease_v019=DOID:3093;1.22e-09;11 | ||
|ontology_enrichment_disease_v019_2=DOID:3093,1.22e-09,11 | |||
|ontology_enrichment_uberon=UBERON:0000970!1.11e-15!20;UBERON:0002104!5.66e-15!21;UBERON:0000020!9.64e-14!23;UBERON:0001032!3.34e-13!24;UBERON:0004456!3.34e-13!24;UBERON:0010077!1.44e-09!4;UBERON:0005389!1.44e-09!4;UBERON:0000484!1.44e-09!4;UBERON:0002546!1.44e-09!4;UBERON:0000965!1.44e-09!4;UBERON:0001803!1.44e-09!4;UBERON:0003073!1.44e-09!4;UBERON:0005426!1.44e-09!4;UBERON:0001708!1.70e-09!4;UBERON:0001704!1.70e-09!4;UBERON:0000966!5.35e-08!5;UBERON:0005388!5.35e-08!5;UBERON:0001802!5.35e-08!5;UBERON:0000019!5.54e-08!19;UBERON:0000047!5.54e-08!19;UBERON:0004088!5.54e-08!19;UBERON:0003072!5.54e-08!19;UBERON:0003071!5.54e-08!19;UBERON:0004128!5.54e-08!19;UBERON:0001456!2.60e-07!21;UBERON:0002090!9.49e-07!6 | |ontology_enrichment_uberon=UBERON:0000970!1.11e-15!20;UBERON:0002104!5.66e-15!21;UBERON:0000020!9.64e-14!23;UBERON:0001032!3.34e-13!24;UBERON:0004456!3.34e-13!24;UBERON:0010077!1.44e-09!4;UBERON:0005389!1.44e-09!4;UBERON:0000484!1.44e-09!4;UBERON:0002546!1.44e-09!4;UBERON:0000965!1.44e-09!4;UBERON:0001803!1.44e-09!4;UBERON:0003073!1.44e-09!4;UBERON:0005426!1.44e-09!4;UBERON:0001708!1.70e-09!4;UBERON:0001704!1.70e-09!4;UBERON:0000966!5.35e-08!5;UBERON:0005388!5.35e-08!5;UBERON:0001802!5.35e-08!5;UBERON:0000019!5.54e-08!19;UBERON:0000047!5.54e-08!19;UBERON:0004088!5.54e-08!19;UBERON:0003072!5.54e-08!19;UBERON:0003071!5.54e-08!19;UBERON:0004128!5.54e-08!19;UBERON:0001456!2.60e-07!21;UBERON:0002090!9.49e-07!6 | ||
|ontology_enrichment_uberon_v019=UBERON:0000966;4.21e-21;5!UBERON:0005388;4.21e-21;5!UBERON:0001802;4.21e-21;5!UBERON:0000970;5.71e-21;20!UBERON:0002104;4.86e-20;21!UBERON:0000020;2.02e-18;23!UBERON:0001032;1.03e-17;24!UBERON:0004456;1.03e-17;24 | |ontology_enrichment_uberon_v019=UBERON:0000966;4.21e-21;5!UBERON:0005388;4.21e-21;5!UBERON:0001802;4.21e-21;5!UBERON:0000970;5.71e-21;20!UBERON:0002104;4.86e-20;21!UBERON:0000020;2.02e-18;23!UBERON:0001032;1.03e-17;24!UBERON:0004456;1.03e-17;24 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000970,4.86e-20,21;UBERON:0002104,4.86e-20,21;UBERON:0000966,7.67e-18,6;UBERON:0005388,7.67e-18,6;UBERON:0001802,7.67e-18,6;UBERON:0000020,1.03e-17,24;UBERON:0001032,1.03e-17,24;UBERON:0004456,1.03e-17,24 | |||
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|short_description=p@chr4:18196043..18196063,+ | |short_description=p@chr4:18196043..18196063,+ | ||
}} | }} |
Latest revision as of 03:43, 30 July 2015
Short description: | p@chr4:18196043..18196063, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr4:18196043..18196063, + |
Coexpression cluster: | C87_retinoblastoma_left_nonsmall_heart_small_diaphragm_bronchogenic |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
glial cell (sensu Vertebrata) | 3.38e-07 | 15 |
glial cell | 3.38e-07 | 15 |
glioblast | 3.38e-07 | 15 |
glioblast (sensu Vertebrata) | 3.38e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
eye | 4.86e-20 | 21 |
visual system | 4.86e-20 | 21 |
retina | 7.67e-18 | 6 |
photoreceptor array | 7.67e-18 | 6 |
posterior segment of eyeball | 7.67e-18 | 6 |
sense organ | 1.03e-17 | 24 |
sensory system | 1.03e-17 | 24 |
entire sense organ system | 1.03e-17 | 24 |
Ontology term | p-value | n |
---|---|---|
nervous system cancer | 1.22e-09 | 11 |